cassava21270.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava21270.m1 T284069_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava21270.m1 Myb 174 224

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava35050.m1 Manihot esculenta cassava35050.m1 N 0.811
Bra009284 Brassica rapa Bra009284 N 0.796
Thhalv10016040m.g Eutrema salsugineum Thhalv10016040m.g N 0.796
Bo9g175250 Brassica oleracea Bo9g175250 N 0.796
Ciclev10006586m.g Citrus clementina Ciclev10006586m.g N 0.789
orange1.1g040406m.g Citrus sinensis orange1.1g040406m.g N 0.789
ARR21 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000557 N 0.787
Carubv10003421m.g Capsella rubella Carubv10003421m.g N 0.787
Bostr.13129s0247 Boechera stricta Bostr.13129s0247 N 0.787
Carubv10007858m.g Capsella rubella Carubv10007858m.g N 0.779
30147.m014309 Ricinus communis 30147.m014309 N 0.774
PRUPE_ppa023185mg Prunus persica PRUPE_ppa023185mg N 0.774
gene13325-v1.0-hybrid Fragaria vesca gene13325-v1.0-hybrid N 0.774
Carubv10006317m.g Capsella rubella Carubv10006317m.g N 0.767
Bo2g007540 Brassica oleracea Bo2g007540 N 0.756
Bra028705 Brassica rapa Bra028705 N 0.756
Ciclev10006834m.g Citrus clementina Ciclev10006834m.g N 0.755
orange1.1g043479m.g Citrus sinensis orange1.1g043479m.g N 0.755
ARR21 Arabidopsis thaliana AT5G07210 N 0.748
Cucsa.251000 Cucumis sativus Cucsa.251000 N 0.745
Cla006313 Citrullus lanatus Cla006313 N 0.745
evm.TU.supercontig_107.3 Carica papaya evm.TU.supercontig_107.3 N 0.733
POPTR_0015s13860 Populus trichocarpa POPTR_0015s13860 I 0.733
Cagra.6496s0001 Capsella grandiflora Cagra.6496s0001 N 0.730
Gorai.008G280500 Gossypium raimondii Gorai.008G280500 I 0.711
cassava37075.valid.m1 Manihot esculenta cassava37075.valid.m1 I 0.708
Gorai.001G030600 Gossypium raimondii Gorai.001G030600 I 0.708
cassava37074.valid.m1 Manihot esculenta cassava37074.valid.m1 I 0.708
VIT_16s0100g00430 Vitis vinifera VIT_16s0100g00430 N 0.708
Ca_20899 Cicer arietinum Ca_20899 I 0.699
Cla007104 Citrullus lanatus Cla007104 N 0.699
VIT_16s0100g00420 Vitis vinifera VIT_16s0100g00420 I 0.699
Bra005928 Brassica rapa Bra005928 N 0.697
mgf018042m Mimulus guttatus mgf018042m N 0.696
TCM_015085 Theobroma cacao TCM_015085 I 0.696
POPTR_0012s13900 Populus trichocarpa POPTR_0012s13900 N 0.694
ARR13 Arabidopsis thaliana AT2G27070 N 0.693
GSMUA_Achr10G23650_001 Musa acuminata GSMUA_Achr10G23650_001 N 0.687
MTR_7g026400 Medicago truncatula MTR_7g026400 I 0.687
SapurV1A.0400s0190 Salix purpurea SapurV1A.0400s0190 N 0.685
MDP0000228719 Malus domestica MDP0000228719 N 0.680
AMTR_s00057p00108840 Amborella trichopoda AMTR_s00057p00108840 I 0.671
gene03235-v1.0-hybrid Fragaria vesca gene03235-v1.0-hybrid N 0.666
Thhalv10015296m.g Eutrema salsugineum Thhalv10015296m.g I 0.666
Gorai.009G054200 Gossypium raimondii Gorai.009G054200 I 0.663
Eucgr.C00380 Eucalyptus grandis Eucgr.C00380 I 0.663
Solyc12g010330.1 Solanum lycopersicum Solyc12g010330.1 I 0.663
Pm027701 Prunus mume Pm027701 I 0.663
PGSC0003DMG400007823 Solanum tuberosum PGSC0003DMG400007823 I 0.663
AMTR_s00086p00182350 Amborella trichopoda AMTR_s00086p00182350 I 0.663
PRUPE_ppa018934mg Prunus persica PRUPE_ppa018934mg I 0.663
evm.TU.supercontig_46.117 Carica papaya evm.TU.supercontig_46.117 I 0.663
IGS.gm_5_00099 Chlorella NC64A IGS.gm_5_00099 N 0.662
mgf019327m Mimulus guttatus mgf019327m N 0.662