CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LjSGA_125152.1
(
Lotus japonicus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
LjSGA_125152.1
T291014_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARR18
M02313_2.00
Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN
PBM
Weirauch et al.(2014)
pTH8840
0.745
0.766
ARR1
M02296_2.00
Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN
PBM
Weirauch et al.(2014)
pTH8257
0.673
0.745
ARR1
M02297_2.00
Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN
PBM
Weirauch et al.(2014)
pTH8590
0.670
0.745
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjSGA_125152.1
Myb
158
208
RVVWSVDLHEKFVSAVIQLGLDRAVPKRILELMNDPDLTRENVASHLQVCF
Links
Other
Myb/SANT
family TFs
Other
Lotus japonicus
TFs
255 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LjSGA_060038.1
Lotus japonicus
LjSGA_060038.1
I
0.833
LjSGA_066155.1
Lotus japonicus
LjSGA_066155.1
I
0.826
cassava18404.valid.m1
Manihot esculenta
cassava18404.valid.m1
I
0.818
cassava18405.valid.m1
Manihot esculenta
cassava18405.valid.m1
I
0.818
29737.m001227
Ricinus communis
29737.m001227
I
0.818
POPTR_0006s20220
Populus trichocarpa
POPTR_0006s20220
I
0.818
POPTR_0018s11960
Populus trichocarpa
POPTR_0018s11960
I
0.818
cassava262.valid.m1
Manihot esculenta
cassava262.valid.m1
I
0.818
GLYMA09G14650
Glycine max
GLYMA09G14650
I
0.818
GLYMA15G24770
Glycine max
GLYMA15G24770
I
0.818
SapurV1A.0347s0250
Salix purpurea
SapurV1A.0347s0250
I
0.818
TCM_037098
Theobroma cacao
TCM_037098
I
0.818
SapurV1A.0100s0230
Salix purpurea
SapurV1A.0100s0230
I
0.818
chr5.CM0345.260.nd
Lotus japonicus
chr5.CM0345.260.nd
I
0.808
Eucgr.C00380
Eucalyptus grandis
Eucgr.C00380
I
0.803
evm.TU.supercontig_46.117
Carica papaya
evm.TU.supercontig_46.117
I
0.803
Gorai.004G291100
Gossypium raimondii
Gorai.004G291100
I
0.803
Gorai.009G054200
Gossypium raimondii
Gorai.009G054200
I
0.803
chr6.CM0037.920.nc
Lotus japonicus
chr6.CM0037.920.nc
I
0.800
Bostr.26833s0442
Boechera stricta
Bostr.26833s0442
I
0.784
Carubv10026052m.g
Capsella rubella
Carubv10026052m.g
I
0.784
Cagra.0891s0003
Capsella grandiflora
Cagra.0891s0003
I
0.784
GLYMA07G26890
Glycine max
GLYMA07G26890
I
0.778
GLYMA02G09451
Glycine max
GLYMA02G09451
I
0.778
Ca_15151
Cicer arietinum
Ca_15151
I
0.778
MDP0000124301
Malus domestica
MDP0000124301
I
0.778
MDP0000155328
Malus domestica
MDP0000155328
I
0.778
APRR4
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_8000961
I
0.776
PRUPE_ppa002493mg
Prunus persica
PRUPE_ppa002493mg
I
0.775
Pm005877
Prunus mume
Pm005877
I
0.775
Solyc12g010330.1
Solanum lycopersicum
Solyc12g010330.1
I
0.769
PRUPE_ppa018934mg
Prunus persica
PRUPE_ppa018934mg
I
0.769
Pm027701
Prunus mume
Pm027701
I
0.769
PGSC0003DMG400007823
Solanum tuberosum
PGSC0003DMG400007823
I
0.769
Bo2g028820
Brassica oleracea
Bo2g028820
I
0.766
Thhalv10015296m.g
Eutrema salsugineum
Thhalv10015296m.g
I
0.766
Bra020390
Brassica rapa
Bra020390
I
0.766
MLOC_61880
Hordeum vulgare
MLOC_61880
I
0.763
MTR_1g032570
Medicago truncatula
MTR_1g032570
I
0.759
MDP0000311914
Malus domestica
MDP0000311914
I
0.759
cassava37075.valid.m1
Manihot esculenta
cassava37075.valid.m1
I
0.758
Gorai.001G030600
Gossypium raimondii
Gorai.001G030600
I
0.758
cassava37074.valid.m1
Manihot esculenta
cassava37074.valid.m1
I
0.758
ARR18
Arabidopsis thaliana
AT5G58080
D
0.745
ARR18
Arabidopsis lyrata
Al_scaffold_0008_2276
I
0.745
Traes_7BS_17C8D2707
Triticum aestivum
Traes_7BS_17C8D2707
I
0.744
Ca_14780
Cicer arietinum
Ca_14780
I
0.743
ORGLA02G0311700
Oryza glaberrima
ORGLA02G0311700
I
0.737
Gorai.010G243900
Gossypium raimondii
Gorai.010G243900
I
0.737
ORUFI06G05490
Oryza rufipogon
ORUFI06G05490
I
0.737
TRIUR3_28229
Triticum urartu
TRIUR3_28229
I
0.737
OPUNC06G05150
Oryza punctata
OPUNC06G05150
I
0.737
OGLUM06G05540
Oryza glumaepatula
OGLUM06G05540
I
0.737
OLONG_005451
Oryza longistaminata
OLONG_005451
I
0.737
OMERI06G06380
Oryza meridionalis
OMERI06G06380
I
0.737
ONIVA06G06160
Oryza nivara
ONIVA06G06160
I
0.737
RR23
Oryza sativa
OS02G0796500
I
0.737
GRMZM2G479110
Zea mays
GRMZM2G479110
I
0.737
Si006013m.g
Setaria italica
Si006013m.g
I
0.737
Si016546m.g
Setaria italica
Si016546m.g
I
0.737
TCM_036926
Theobroma cacao
TCM_036926
I
0.737
F775_19079
Aegilops tauschii
F775_19079
I
0.737
Sb10g005580
Sorghum bicolor
Sb10g005580
I
0.737
Sb04g035980
Sorghum bicolor
Sb04g035980
I
0.737
Traes_7AS_503B57D77
Triticum aestivum
Traes_7AS_503B57D77
I
0.737
Traes_7AS_1318B59D3
Triticum aestivum
Traes_7AS_1318B59D3
I
0.737
TRIUR3_26858
Triticum urartu
TRIUR3_26858
I
0.737
RR22
Oryza sativa
OS06G0183100
I
0.737
ORGLA06G0048800
Oryza glaberrima
ORGLA06G0048800
I
0.737
Pavir.J35630
Panicum virgatum
Pavir.J35630
I
0.737
Pavir.J08270
Panicum virgatum
Pavir.J08270
I
0.737
RR22
Oryza indica
BGIOSGA022430
I
0.737
RR23
Oryza indica
BGIOSGA005436
I
0.737
LPERR06G04900
Leersia perrieri
LPERR06G04900
I
0.737
OBART06G05360
Oryza barthii
OBART06G05360
I
0.737
Pavir.Da02067
Panicum virgatum
Pavir.Da02067
I
0.737
Traes_7DS_22DE624A5
Triticum aestivum
Traes_7DS_22DE624A5
I
0.737
Traes_7AS_DECB8080D
Triticum aestivum
Traes_7AS_DECB8080D
I
0.737
OB06G14930
Oryza brachyantha
OB06G14930
I
0.737
OB02G42700
Oryza brachyantha
OB02G42700
I
0.737
chr4.CM0042.1440.nc
Lotus japonicus
chr4.CM0042.1440.nc
I
0.733
PDK_20s1782651g001
Phoenix dactylifera
PDK_20s1782651g001
I
0.729
Aquca_016_00168
Aquilegia coerulea
Aquca_016_00168
I
0.729
orange1.1g005465m.g
Citrus sinensis
orange1.1g005465m.g
I
0.729
GLYMA06G06730
Glycine max
GLYMA06G06730
I
0.729
Cucsa.271670
Cucumis sativus
Cucsa.271670
I
0.729
Cla021325
Citrullus lanatus
Cla021325
I
0.729
cassava8114.valid.m1
Manihot esculenta
cassava8114.valid.m1
I
0.729
PDK_20s1342911g003
Phoenix dactylifera
PDK_20s1342911g003
I
0.729
PDK_20s1362511g001
Phoenix dactylifera
PDK_20s1362511g001
I
0.729
VIT_04s0008g05900
Vitis vinifera
VIT_04s0008g05900
I
0.729
GLYMA14G13320
Glycine max
GLYMA14G13320
I
0.729
Ciclev10007639m.g
Citrus clementina
Ciclev10007639m.g
I
0.729
GSMUA_Achr11G08310_001
Musa acuminata
GSMUA_Achr11G08310_001
I
0.729
SapurV1A.0730s0060
Salix purpurea
SapurV1A.0730s0060
I
0.729
GLYMA04G06650
Glycine max
GLYMA04G06650
I
0.729
evm.TU.supercontig_127.10
Carica papaya
evm.TU.supercontig_127.10
I
0.729
29848.m004559
Ricinus communis
29848.m004559
I
0.729
TCM_015085
Theobroma cacao
TCM_015085
I
0.725
GSMUA_Achr3G14630_001
Musa acuminata
GSMUA_Achr3G14630_001
I
0.723
Gorai.009G061000
Gossypium raimondii
Gorai.009G061000
I
0.722
AMTR_s00086p00182350
Amborella trichopoda
AMTR_s00086p00182350
I
0.720
orange1.1g009670m.g
Citrus sinensis
orange1.1g009670m.g
I
0.718
cassava40494.m1
Manihot esculenta
cassava40494.m1
I
0.714
Cucsa.069440
Cucumis sativus
Cucsa.069440
I
0.714
PGSC0003DMG400029514
Solanum tuberosum
PGSC0003DMG400029514
I
0.714
VIT_11s0206g00060
Vitis vinifera
VIT_11s0206g00060
I
0.714
F775_03846
Aegilops tauschii
F775_03846
I
0.711
F775_03134
Aegilops tauschii
F775_03134
I
0.711
TRIUR3_25232
Triticum urartu
TRIUR3_25232
I
0.711
TRIUR3_20429
Triticum urartu
TRIUR3_20429
I
0.711
AMTR_s00057p00108840
Amborella trichopoda
AMTR_s00057p00108840
I
0.710
Cucsa.350850
Cucumis sativus
Cucsa.350850
I
0.706
Traes_6BS_B50BEBC7E
Triticum aestivum
Traes_6BS_B50BEBC7E
I
0.704
Traes_6AS_A42E71A00
Triticum aestivum
Traes_6AS_A42E71A00
I
0.704
Traes_6DS_EF4A57213
Triticum aestivum
Traes_6DS_EF4A57213
I
0.704
Eucgr.C04050
Eucalyptus grandis
Eucgr.C04050
I
0.704
Pavir.Aa03151
Panicum virgatum
Pavir.Aa03151
I
0.704
Pavir.Ab00568
Panicum virgatum
Pavir.Ab00568
I
0.704
MLOC_3955
Hordeum vulgare
MLOC_3955
I
0.704
TRIUR3_31924
Triticum urartu
TRIUR3_31924
I
0.704
BRADI3G06120
Brachypodium distachyon
BRADI3G06120
I
0.704
Si016630m.g
Setaria italica
Si016630m.g
I
0.704
F775_13501
Aegilops tauschii
F775_13501
I
0.704
Sb04g005580
Sorghum bicolor
Sb04g005580
I
0.704
GRMZM2G060485
Zea mays
GRMZM2G060485
I
0.704
GSMUA_AchrUn_randomG18820_001
Musa acuminata
GSMUA_AchrUn_randomG18820_001
I
0.703
Traes_7DS_327FBC2CA
Triticum aestivum
Traes_7DS_327FBC2CA
I
0.703
GRMZM2G409974
Zea mays
GRMZM2G409974
I
0.703
F775_14758
Aegilops tauschii
F775_14758
I
0.703
MLOC_11341
Hordeum vulgare
MLOC_11341
I
0.703
e_gw1.1.548.1
Coccomyxa subellipsoidea C169
e_gw1.1.548.1
I
0.701
Bo1g123000
Brassica oleracea
Bo1g123000
I
0.699
orange1.1g005719m.g
Citrus sinensis
orange1.1g005719m.g
I
0.695
Ciclev10007648m.g
Citrus clementina
Ciclev10007648m.g
I
0.695
GSMUA_Achr3G13400_001
Musa acuminata
GSMUA_Achr3G13400_001
I
0.695
Pm005710
Prunus mume
Pm005710
I
0.695
PRUPE_ppa024819mg
Prunus persica
PRUPE_ppa024819mg
I
0.695
Aquca_056_00105
Aquilegia coerulea
Aquca_056_00105
I
0.692
TRIUR3_30130
Triticum urartu
TRIUR3_30130
I
0.690
OLONG_007266
Oryza longistaminata
OLONG_007266
I
0.689
GLYMA05G34516
Glycine max
GLYMA05G34516
I
0.689
OMERI02G07120
Oryza meridionalis
OMERI02G07120
I
0.689
OGLUM02G06200
Oryza glumaepatula
OGLUM02G06200
I
0.689
ORGLA02G0057500
Oryza glaberrima
ORGLA02G0057500
I
0.689
RR24
Oryza sativa
OS02G0182100
I
0.689
ORUFI02G06340
Oryza rufipogon
ORUFI02G06340
I
0.689
OB02G15530
Oryza brachyantha
OB02G15530
I
0.689
ONIVA02G07230
Oryza nivara
ONIVA02G07230
I
0.689
OBART02G06200
Oryza barthii
OBART02G06200
I
0.689
LPERR02G05460
Leersia perrieri
LPERR02G05460
I
0.689
RR24
Oryza indica
BGIOSGA007015
I
0.689
evm.TU.supercontig_9.105
Carica papaya
evm.TU.supercontig_9.105
I
0.688
POPTR_0010s00320
Populus trichocarpa
POPTR_0010s00320
I
0.688
gene05178-v1.0-hybrid
Fragaria vesca
gene05178-v1.0-hybrid
I
0.688
POPTR_0010s11600
Populus trichocarpa
POPTR_0010s11600
I
0.688
evm.TU.supercontig_2.186
Carica papaya
evm.TU.supercontig_2.186
I
0.688
Ciclev10004470m.g
Citrus clementina
Ciclev10004470m.g
I
0.688
Eucgr.G02094
Eucalyptus grandis
Eucgr.G02094
I
0.688
ARR14
Vitis vinifera
VIT_01s0011g05830
I
0.688
Eucgr.A00189
Eucalyptus grandis
Eucgr.A00189
I
0.688
PGSC0003DMG400023534
Solanum tuberosum
PGSC0003DMG400023534
I
0.688
Ciclev10014527m.g
Citrus clementina
Ciclev10014527m.g
I
0.688
POPTR_0008s22990
Populus trichocarpa
POPTR_0008s22990
I
0.688
Gorai.002G029200
Gossypium raimondii
Gorai.002G029200
I
0.688
MDP0000224740
Malus domestica
MDP0000224740
I
0.688
AMTR_s00176p00045260
Amborella trichopoda
AMTR_s00176p00045260
I
0.688
PK26059.1
Cannabis sativa
PK26059.1
I
0.688
GSMUA_Achr1G22230_001
Musa acuminata
GSMUA_Achr1G22230_001
I
0.688
GSMUA_Achr9G16610_001
Musa acuminata
GSMUA_Achr9G16610_001
I
0.688
GSMUA_Achr8G30850_001
Musa acuminata
GSMUA_Achr8G30850_001
I
0.688
PDK_20s1451831g001
Phoenix dactylifera
PDK_20s1451831g001
I
0.688
SapurV1A.0055s0320
Salix purpurea
SapurV1A.0055s0320
I
0.688
MTR_4g121020
Medicago truncatula
MTR_4g121020
I
0.688
Lus10016846.g
Linum usitatissimum
Lus10016846.g
I
0.688
Gorai.011G196400
Gossypium raimondii
Gorai.011G196400
I
0.688
Lus10037719.g
Linum usitatissimum
Lus10037719.g
I
0.688
PRUPE_ppa002408mg
Prunus persica
PRUPE_ppa002408mg
I
0.688
orange1.1g005938m.g
Citrus sinensis
orange1.1g005938m.g
I
0.688
MDP0000290818
Malus domestica
MDP0000290818
I
0.688
Gorai.005G156900
Gossypium raimondii
Gorai.005G156900
I
0.688
PGSC0003DMG401025624
Solanum tuberosum
PGSC0003DMG401025624
I
0.688
Solyc01g065540.2
Solanum lycopersicum
Solyc01g065540.2
I
0.688
Aquca_091_00086
Aquilegia coerulea
Aquca_091_00086
I
0.688
Solyc05g054390.2
Solanum lycopersicum
Solyc05g054390.2
I
0.688
SELMODRAFT_450181
Selaginella moellendorffii
SELMODRAFT_450181
I
0.688
cassava43032.valid.m1
Manihot esculenta
cassava43032.valid.m1
I
0.688
Cucsa.252760
Cucumis sativus
Cucsa.252760
I
0.688
SELMODRAFT_173793
Selaginella moellendorffii
SELMODRAFT_173793
I
0.688
29889.m003245
Ricinus communis
29889.m003245
I
0.688
27647.m000179
Ricinus communis
27647.m000179
I
0.688
GLYMA07G37220
Glycine max
GLYMA07G37220
I
0.688
Ca_02989
Cicer arietinum
Ca_02989
I
0.688
VIT_05s0077g01480
Vitis vinifera
VIT_05s0077g01480
I
0.688
Cla009424
Citrullus lanatus
Cla009424
I
0.688
Cla022101
Citrullus lanatus
Cla022101
I
0.688
TCM_011067
Theobroma cacao
TCM_011067
I
0.688
TCM_021300
Theobroma cacao
TCM_021300
I
0.688
GLYMA17G03380
Glycine max
GLYMA17G03380
I
0.688
Solyc04g008050.2
Solanum lycopersicum
Solyc04g008050.2
I
0.688
Aquca_003_00615
Aquilegia coerulea
Aquca_003_00615
I
0.688
mgf010113m
Mimulus guttatus
mgf010113m
I
0.686
MTR_3g106220
Medicago truncatula
MTR_3g106220
I
0.686
mgf012203m
Mimulus guttatus
mgf012203m
I
0.686
MTR_7g026400
Medicago truncatula
MTR_7g026400
I
0.683
MTR_0450s0040
Medicago truncatula
MTR_0450s0040
I
0.682
Ca_03351
Cicer arietinum
Ca_03351
I
0.682
GLYMA15G15520
Glycine max
GLYMA15G15520
I
0.682
PGSC0003DMG400003196
Solanum tuberosum
PGSC0003DMG400003196
I
0.680
mgf014863m
Mimulus guttatus
mgf014863m
I
0.680
Solyc07g005140.2
Solanum lycopersicum
Solyc07g005140.2
I
0.680
mgf001591m
Mimulus guttatus
mgf001591m
I
0.680
PDK_20s13009423g003
Phoenix dactylifera
PDK_20s13009423g003
I
0.680
TRIUR3_24314
Triticum urartu
TRIUR3_24314
I
0.677
F775_26936
Aegilops tauschii
F775_26936
I
0.677
Traes_6BL_790C095EE
Triticum aestivum
Traes_6BL_790C095EE
I
0.677
MLOC_76165
Hordeum vulgare
MLOC_76165
I
0.677
BRADI3G54120
Brachypodium distachyon
BRADI3G54120
I
0.677
BRADI1G47400
Brachypodium distachyon
BRADI1G47400
I
0.677
Traes_6DL_D1C9CE275
Triticum aestivum
Traes_6DL_D1C9CE275
I
0.677
Ca_20899
Cicer arietinum
Ca_20899
I
0.676
e_gw1.10.288.1
Physcomitrella patens
e_gw1.10.288.1
I
0.675
estExt_Genewise1.C_90203
Chlorella NC64A
estExt_Genewise1.C_90203
I
0.675
e_gw1.16.93.1
Physcomitrella patens
e_gw1.16.93.1
I
0.675
Cagra.5497s0018
Capsella grandiflora
Cagra.5497s0018
I
0.673
Bostr.28625s0008
Boechera stricta
Bostr.28625s0008
I
0.673
Carubv10013107m.g
Capsella rubella
Carubv10013107m.g
I
0.673
Thhalv10020213m.g
Eutrema salsugineum
Thhalv10020213m.g
I
0.673
ARR1
Arabidopsis thaliana
AT3G16857
D
0.673
ARR1
Arabidopsis lyrata
fgenesh2_kg.3__1853__AT3G16857.2
I
0.673
Gorai.006G259700
Gossypium raimondii
Gorai.006G259700
I
0.673
Bra001643
Brassica rapa
Bra001643
I
0.673
Bo5g123620
Brassica oleracea
Bo5g123620
I
0.673
Bo3g068550
Brassica oleracea
Bo3g068550
I
0.673
Bra022183
Brassica rapa
Bra022183
I
0.673
Thhalv10024686m.g
Eutrema salsugineum
Thhalv10024686m.g
I
0.670
Carubv10007581m.g
Capsella rubella
Carubv10007581m.g
I
0.670
ARR2
Arabidopsis lyrata
scaffold_702902.1
I
0.670
Bra033527
Brassica rapa
Bra033527
I
0.670
Cagra.0053s0018
Capsella grandiflora
Cagra.0053s0018
I
0.670
Bo1g055180
Brassica oleracea
Bo1g055180
I
0.670
Bostr.30275s0051
Boechera stricta
Bostr.30275s0051
I
0.670
gene15029-v1.0-hybrid
Fragaria vesca
gene15029-v1.0-hybrid
I
0.669
Ca_09080
Cicer arietinum
Ca_09080
I
0.669
PK02601.1
Cannabis sativa
PK02601.1
I
0.669
Lus10041020.g
Linum usitatissimum
Lus10041020.g
I
0.669
GLYMA17G33230
Glycine max
GLYMA17G33230
I
0.669
SapurV1A.0705s0030
Salix purpurea
SapurV1A.0705s0030
I
0.669
Lus10005340.g
Linum usitatissimum
Lus10005340.g
I
0.669
PDK_20s13009426g002
Phoenix dactylifera
PDK_20s13009426g002
I
0.667
MTR_2g034960
Medicago truncatula
MTR_2g034960
I
0.667
e_gw1.83.144.1
Volvox carteri
e_gw1.83.144.1
I
0.665
MTR_1g013170
Medicago truncatula
MTR_1g013170
I
0.663
Aquca_011_00344
Aquilegia coerulea
Aquca_011_00344
I
0.663
Gorai.008G280500
Gossypium raimondii
Gorai.008G280500
I
0.661