Bo7g104190 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo7g104190 T267514_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARR1
M02297_2.00 		Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN		 PBM
Weirauch et al.(2014)
pTH8590 		0.849 0.979
ARR1
M02296_2.00 		Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN		 PBM
Weirauch et al.(2014)
pTH8257 		0.816 0.936
ARR10
M02702_2.00 		Arabidopsis thaliana
AGATHYKN
NMRDATCT		 SELEX
Mathelier et al.(2014)
MA0121.1 		0.711 0.745
ARR10
M11045_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ARR10_01 		0.711 0.745
e_gw1.362.4.1
M02341_2.00 		Physcomitrella patens
NNNRDATCNN
NNGATHYNNN		 PBM
Weirauch et al.(2014)
pTH8461 		0.702 0.872
ARR14
M00873_2.00 		Arabidopsis thaliana
NNAGATHCKS
SMGDATCTNN		 PBM
Franco-Zorrilla et al.(2014)
ARR14 		0.698 0.830
ARR14
M02293_2.00 		Arabidopsis thaliana
NAGATHYBNN
NNVRDATCTN		 PBM
Weirauch et al.(2014)
pTH7531 		0.698 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g104190.1 Myb 204 254

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

246 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra012743 Brassica rapa Bra012743 I 0.909
Cagra.0053s0018 Capsella grandiflora Cagra.0053s0018 I 0.849
Bo1g055180 Brassica oleracea Bo1g055180 I 0.849
Bra033527 Brassica rapa Bra033527 I 0.849
Bostr.30275s0051 Boechera stricta Bostr.30275s0051 I 0.849
Carubv10007581m.g Capsella rubella Carubv10007581m.g I 0.849
Thhalv10024686m.g Eutrema salsugineum Thhalv10024686m.g I 0.849
ARR2 Arabidopsis lyrata scaffold_702902.1 I 0.849
Lus10037719.g Linum usitatissimum Lus10037719.g I 0.831
Lus10016846.g Linum usitatissimum Lus10016846.g I 0.831
GSMUA_Achr9G16610_001 Musa acuminata GSMUA_Achr9G16610_001 I 0.831
estExt_Genewise1.C_90203 Chlorella NC64A estExt_Genewise1.C_90203 I 0.818
Bra001643 Brassica rapa Bra001643 I 0.816
Bra022183 Brassica rapa Bra022183 I 0.816
Bostr.28625s0008 Boechera stricta Bostr.28625s0008 I 0.816
Carubv10013107m.g Capsella rubella Carubv10013107m.g I 0.816
Cagra.5497s0018 Capsella grandiflora Cagra.5497s0018 I 0.816
Bo5g123620 Brassica oleracea Bo5g123620 I 0.816
ARR1 Arabidopsis thaliana AT3G16857 D 0.816
Bo3g068550 Brassica oleracea Bo3g068550 I 0.816
Lus10041020.g Linum usitatissimum Lus10041020.g I 0.805
Lus10005340.g Linum usitatissimum Lus10005340.g I 0.805
Ca_09080 Cicer arietinum Ca_09080 I 0.805
Ciclev10004989m.g Citrus clementina Ciclev10004989m.g I 0.802
OLONG_002370 Oryza longistaminata OLONG_002370 I 0.795
OGLUM03G09080 Oryza glumaepatula OGLUM03G09080 I 0.795
Pavir.Ia04946 Panicum virgatum Pavir.Ia04946 I 0.795
Sb01g042400 Sorghum bicolor Sb01g042400 I 0.795
LPERR03G08040 Leersia perrieri LPERR03G08040 I 0.795
Traes_4DL_2527CA8BF Triticum aestivum Traes_4DL_2527CA8BF I 0.795
OMERI03G08390 Oryza meridionalis OMERI03G08390 I 0.795
OBART03G08950 Oryza barthii OBART03G08950 I 0.795
ONIVA06G01160 Oryza nivara ONIVA06G01160 I 0.795
Traes_4BL_941E7DE4D Triticum aestivum Traes_4BL_941E7DE4D I 0.795
POPTR_0008s13490 Populus trichocarpa POPTR_0008s13490 I 0.795
TRIUR3_25342 Triticum urartu TRIUR3_25342 I 0.795
RR21 Oryza sativa OS03G0224200 I 0.795
ORUFI03G09090 Oryza rufipogon ORUFI03G09090 I 0.795
OPUNC03G08640 Oryza punctata OPUNC03G08640 I 0.795
ORGLA03G0086800 Oryza glaberrima ORGLA03G0086800 I 0.795
Traes_4AS_6486B493A Triticum aestivum Traes_4AS_6486B493A I 0.795
SapurV1A.0015s0530 Salix purpurea SapurV1A.0015s0530 I 0.795
OB03G19140 Oryza brachyantha OB03G19140 I 0.795
Pavir.Ib00921 Panicum virgatum Pavir.Ib00921 I 0.795
Si034517m.g Setaria italica Si034517m.g I 0.795
BRADI1G69480 Brachypodium distachyon BRADI1G69480 I 0.795
F775_32153 Aegilops tauschii F775_32153 I 0.795
GRMZM2G099797 Zea mays GRMZM2G099797 I 0.795
GRMZM2G126834 Zea mays GRMZM2G126834 I 0.795
RR21 Oryza indica BGIOSGA012149 I 0.795
Bostr.0556s0001 Boechera stricta Bostr.0556s0001 I 0.787
PDK_20s1887621g001 Phoenix dactylifera PDK_20s1887621g001 I 0.780
e_gw1.42.55.1 Physcomitrella patens e_gw1.42.55.1 I 0.775
gw1.31.134.1 Physcomitrella patens gw1.31.134.1 I 0.775
mg021488m Mimulus guttatus mg021488m I 0.774
Thhalv10020213m.g Eutrema salsugineum Thhalv10020213m.g I 0.763
MTR_1g032570 Medicago truncatula MTR_1g032570 I 0.753
Bo1g123000 Brassica oleracea Bo1g123000 I 0.751
29848.m004559 Ricinus communis 29848.m004559 I 0.745
Thhalv10004402m.g Eutrema salsugineum Thhalv10004402m.g I 0.744
Ca_14780 Cicer arietinum Ca_14780 I 0.744
PGSC0003DMG401025624 Solanum tuberosum PGSC0003DMG401025624 I 0.742
29889.m003245 Ricinus communis 29889.m003245 I 0.742
VIT_05s0077g01480 Vitis vinifera VIT_05s0077g01480 I 0.742
cassava43032.valid.m1 Manihot esculenta cassava43032.valid.m1 I 0.742
MDP0000290818 Malus domestica MDP0000290818 I 0.742
PGSC0003DMG400023534 Solanum tuberosum PGSC0003DMG400023534 I 0.742
Cla009424 Citrullus lanatus Cla009424 I 0.742
MDP0000224740 Malus domestica MDP0000224740 I 0.742
Cla022101 Citrullus lanatus Cla022101 I 0.742
PRUPE_ppa002408mg Prunus persica PRUPE_ppa002408mg I 0.742
Ca_02989 Cicer arietinum Ca_02989 I 0.742
POPTR_0010s00320 Populus trichocarpa POPTR_0010s00320 I 0.742
TCM_021300 Theobroma cacao TCM_021300 I 0.742
SELMODRAFT_173793 Selaginella moellendorffii SELMODRAFT_173793 I 0.742
MTR_4g121020 Medicago truncatula MTR_4g121020 I 0.742
Ciclev10004470m.g Citrus clementina Ciclev10004470m.g I 0.742
evm.TU.supercontig_9.105 Carica papaya evm.TU.supercontig_9.105 I 0.742
Eucgr.A00189 Eucalyptus grandis Eucgr.A00189 I 0.742
Solyc05g054390.2 Solanum lycopersicum Solyc05g054390.2 I 0.742
GLYMA17G03380 Glycine max GLYMA17G03380 I 0.742
Gorai.002G029200 Gossypium raimondii Gorai.002G029200 I 0.742
Aquca_003_00615 Aquilegia coerulea Aquca_003_00615 I 0.742
GLYMA07G37220 Glycine max GLYMA07G37220 I 0.742
POPTR_0008s22990 Populus trichocarpa POPTR_0008s22990 I 0.742
Gorai.011G196400 Gossypium raimondii Gorai.011G196400 I 0.742
Solyc01g065540.2 Solanum lycopersicum Solyc01g065540.2 I 0.742
SELMODRAFT_450181 Selaginella moellendorffii SELMODRAFT_450181 I 0.742
Cucsa.252760 Cucumis sativus Cucsa.252760 I 0.742
PK26059.1 Cannabis sativa PK26059.1 I 0.742
OSTLU_26838 Ostreococcus lucimarinus OSTLU_26838 I 0.739
fgeneshCV_pg.C_scaffold_15000185 Chlorella vulgaris fgeneshCV_pg.C_scaffold_15000185 I 0.736
GLYMA15G15520 Glycine max GLYMA15G15520 I 0.736
gw1.15.242.1 Coccomyxa subellipsoidea C169 gw1.15.242.1 I 0.736
TCM_011067 Theobroma cacao TCM_011067 I 0.735
Aquca_091_00086 Aquilegia coerulea Aquca_091_00086 I 0.735
Gorai.005G156900 Gossypium raimondii Gorai.005G156900 I 0.735
MDP0000124301 Malus domestica MDP0000124301 I 0.735
MDP0000155328 Malus domestica MDP0000155328 I 0.735
orange1.1g005938m.g Citrus sinensis orange1.1g005938m.g I 0.735
evm.TU.supercontig_2.186 Carica papaya evm.TU.supercontig_2.186 I 0.735
Eucgr.G02094 Eucalyptus grandis Eucgr.G02094 I 0.735
Ca_15151 Cicer arietinum Ca_15151 I 0.735
27647.m000179 Ricinus communis 27647.m000179 I 0.735
SapurV1A.0055s0320 Salix purpurea SapurV1A.0055s0320 I 0.735
Ciclev10014527m.g Citrus clementina Ciclev10014527m.g I 0.735
ARR14 Vitis vinifera VIT_01s0011g05830 I 0.735
Solyc04g008050.2 Solanum lycopersicum Solyc04g008050.2 I 0.735
GSMUA_Achr8G30850_001 Musa acuminata GSMUA_Achr8G30850_001 I 0.735
POPTR_0010s11600 Populus trichocarpa POPTR_0010s11600 I 0.735
PGSC0003DMG400029514 Solanum tuberosum PGSC0003DMG400029514 I 0.735
GLYMA02G09451 Glycine max GLYMA02G09451 I 0.735
GLYMA07G26890 Glycine max GLYMA07G26890 I 0.735
AMTR_s00176p00045260 Amborella trichopoda AMTR_s00176p00045260 I 0.735
GSMUA_Achr1G22230_001 Musa acuminata GSMUA_Achr1G22230_001 I 0.735
mgf010113m Mimulus guttatus mgf010113m I 0.732
mgf012203m Mimulus guttatus mgf012203m I 0.732
PRUPE_ppa002493mg Prunus persica PRUPE_ppa002493mg I 0.732
Pm005877 Prunus mume Pm005877 I 0.732
SELMODRAFT_440049 Selaginella moellendorffii SELMODRAFT_440049 I 0.731
SELMODRAFT_115021 Selaginella moellendorffii SELMODRAFT_115021 I 0.731
PDK_20s13009426g002 Phoenix dactylifera PDK_20s13009426g002 I 0.730
cassava37075.valid.m1 Manihot esculenta cassava37075.valid.m1 I 0.727
cassava37074.valid.m1 Manihot esculenta cassava37074.valid.m1 I 0.727
Gorai.001G030600 Gossypium raimondii Gorai.001G030600 I 0.727
ARR1 Arabidopsis lyrata fgenesh2_kg.3__1853__AT3G16857.2 I 0.726
Gorai.006G259700 Gossypium raimondii Gorai.006G259700 I 0.726
Traes_6DL_D1C9CE275 Triticum aestivum Traes_6DL_D1C9CE275 I 0.723
BRADI3G54120 Brachypodium distachyon BRADI3G54120 I 0.723
Traes_6BL_790C095EE Triticum aestivum Traes_6BL_790C095EE I 0.723
BRADI1G47400 Brachypodium distachyon BRADI1G47400 I 0.723
MLOC_76165 Hordeum vulgare MLOC_76165 I 0.723
gene05178-v1.0-hybrid Fragaria vesca gene05178-v1.0-hybrid I 0.721
1200010147 Ostreococcus tauri 1200010147 I 0.718
Bo2g134560 Brassica oleracea Bo2g134560 I 0.717
orange1.1g005719m.g Citrus sinensis orange1.1g005719m.g I 0.715
Ciclev10007648m.g Citrus clementina Ciclev10007648m.g I 0.715
PK02601.1 Cannabis sativa PK02601.1 I 0.715
PDK_20s13009423g003 Phoenix dactylifera PDK_20s13009423g003 I 0.715
SELMODRAFT_447635 Selaginella moellendorffii SELMODRAFT_447635 I 0.714
Cagra.3807s0064 Capsella grandiflora Cagra.3807s0064 I 0.711
ARR10 Arabidopsis lyrata Al_scaffold_0007_907 I 0.711
Thhalv10024866m.g Eutrema salsugineum Thhalv10024866m.g I 0.711
Bostr.7867s1047 Boechera stricta Bostr.7867s1047 I 0.711
Carubv10004554m.g Capsella rubella Carubv10004554m.g I 0.711
ARR10 Arabidopsis thaliana AT4G31920 D 0.711
MDP0000311914 Malus domestica MDP0000311914 I 0.707
SELMODRAFT_418787 Selaginella moellendorffii SELMODRAFT_418787 I 0.702
SELMODRAFT_442188 Selaginella moellendorffii SELMODRAFT_442188 I 0.702
e_gw1.362.4.1 Physcomitrella patens e_gw1.362.4.1 D 0.702
SELMODRAFT_187683 Selaginella moellendorffii SELMODRAFT_187683 I 0.702
SELMODRAFT_150746 Selaginella moellendorffii SELMODRAFT_150746 I 0.702
Traes_6AL_9C9D677D4 Triticum aestivum Traes_6AL_9C9D677D4 I 0.702
SapurV1A.0739s0030 Salix purpurea SapurV1A.0739s0030 I 0.702
PRUPE_ppa023185mg Prunus persica PRUPE_ppa023185mg N 0.700
Carubv10018465m.g Capsella rubella Carubv10018465m.g I 0.698
ARR14 Arabidopsis thaliana AT2G01760 D 0.698
ARR14 Arabidopsis lyrata scaffold_500093.1 I 0.698
Cagra.2235s0034 Capsella grandiflora Cagra.2235s0034 I 0.698
Cucsa.069440 Cucumis sativus Cucsa.069440 I 0.696
GLYMA09G04470 Glycine max GLYMA09G04470 I 0.693
AMTR_s00057p00108840 Amborella trichopoda AMTR_s00057p00108840 I 0.692
GSMUA_Achr11G08310_001 Musa acuminata GSMUA_Achr11G08310_001 I 0.691
gw1.12.455.1 Ostreococcus RCC809 gw1.12.455.1 I 0.690
PDK_20s1451831g001 Phoenix dactylifera PDK_20s1451831g001 I 0.689
cassava40494.m1 Manihot esculenta cassava40494.m1 I 0.689
chr6.CM0037.920.nc Lotus japonicus chr6.CM0037.920.nc I 0.685
AMTR_s00086p00182350 Amborella trichopoda AMTR_s00086p00182350 I 0.684
e_gw1.83.144.1 Volvox carteri e_gw1.83.144.1 I 0.684
chr5.CM0345.260.nd Lotus japonicus chr5.CM0345.260.nd I 0.681
MTR_1g013170 Medicago truncatula MTR_1g013170 I 0.679
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I 0.678
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I 0.678
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I 0.678
Bra026635 Brassica rapa Bra026635 I 0.678
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I 0.678
e_gw1.1.548.1 Coccomyxa subellipsoidea C169 e_gw1.1.548.1 I 0.675
SELMODRAFT_444702 Selaginella moellendorffii SELMODRAFT_444702 I 0.675
TRIUR3_24314 Triticum urartu TRIUR3_24314 I 0.670
CHLREDRAFT_113139 Chlamydomonas reinhardtii CHLREDRAFT_113139 I 0.670
F775_26936 Aegilops tauschii F775_26936 I 0.670
e_gw1.10.288.1 Physcomitrella patens e_gw1.10.288.1 I 0.669
EuGene.0600010100 Micromonas sp RCC299 EuGene.0600010100 I 0.667
Pavir.J10623 Panicum virgatum Pavir.J10623 I 0.667
SapurV1A.0159s0180 Salix purpurea SapurV1A.0159s0180 I 0.667
SapurV1A.1916s0020 Salix purpurea SapurV1A.1916s0020 I 0.667
AMTR_s00101p00128190 Amborella trichopoda AMTR_s00101p00128190 I 0.667
BGIOSGA004786 Oryza indica BGIOSGA004786 I 0.667
Pavir.J06465 Panicum virgatum Pavir.J06465 I 0.667
GLYMA09G14650 Glycine max GLYMA09G14650 I 0.667
BRADI2G54787 Brachypodium distachyon BRADI2G54787 I 0.667
GLYMA15G24770 Glycine max GLYMA15G24770 I 0.667
OGLUM01G41000 Oryza glumaepatula OGLUM01G41000 I 0.667
ONIVA01G41940 Oryza nivara ONIVA01G41940 I 0.667
POPTR_0016s03240 Populus trichocarpa POPTR_0016s03240 I 0.667
EuGene.0000090108 Micromonas pusilla EuGene.0000090108 I 0.667
TCM_037098 Theobroma cacao TCM_037098 I 0.667
gw1.27.80.1 Physcomitrella patens gw1.27.80.1 I 0.667
OS01G0844900 Oryza sativa OS01G0844900 I 0.667
OPUNC01G35910 Oryza punctata OPUNC01G35910 I 0.667
cassava262.valid.m1 Manihot esculenta cassava262.valid.m1 I 0.667
POPTR_0006s03340 Populus trichocarpa POPTR_0006s03340 I 0.667
ORUFI01G40390 Oryza rufipogon ORUFI01G40390 I 0.667
29737.m001227 Ricinus communis 29737.m001227 I 0.667
LPERR01G31830 Leersia perrieri LPERR01G31830 I 0.667
ORGLA01G0309000 Oryza glaberrima ORGLA01G0309000 I 0.667
gw1.29.164.1 Physcomitrella patens gw1.29.164.1 I 0.667
gw1.104.128.1 Physcomitrella patens gw1.104.128.1 I 0.667
gw1.29.165.1 Physcomitrella patens gw1.29.165.1 I 0.667
MTR_2g034960 Medicago truncatula MTR_2g034960 I 0.667
Si002016m.g Setaria italica Si002016m.g I 0.667
OBART01G37040 Oryza barthii OBART01G37040 I 0.667
OMERI01G34110 Oryza meridionalis OMERI01G34110 I 0.667
SELMODRAFT_36646 Selaginella moellendorffii SELMODRAFT_36646 I 0.667
Sb03g039610 Sorghum bicolor Sb03g039610 I 0.667
gene10041-v1.0-hybrid Fragaria vesca gene10041-v1.0-hybrid I 0.665
TRIUR3_28229 Triticum urartu TRIUR3_28229 I 0.663
RR22 Oryza sativa OS06G0183100 I 0.663
TRIUR3_26858 Triticum urartu TRIUR3_26858 I 0.663
RR23 Oryza sativa OS02G0796500 I 0.663
Si016546m.g Setaria italica Si016546m.g I 0.663
Sb04g035980 Sorghum bicolor Sb04g035980 I 0.663
TCM_036926 Theobroma cacao TCM_036926 I 0.663
Traes_7AS_DECB8080D Triticum aestivum Traes_7AS_DECB8080D I 0.663
Sb10g005580 Sorghum bicolor Sb10g005580 I 0.663
Traes_7DS_22DE624A5 Triticum aestivum Traes_7DS_22DE624A5 I 0.663
Si006013m.g Setaria italica Si006013m.g I 0.663
ORGLA02G0311700 Oryza glaberrima ORGLA02G0311700 I 0.663
OBART06G05360 Oryza barthii OBART06G05360 I 0.663
OGLUM06G05540 Oryza glumaepatula OGLUM06G05540 I 0.663
OMERI06G06380 Oryza meridionalis OMERI06G06380 I 0.663
OB06G14930 Oryza brachyantha OB06G14930 I 0.663
GRMZM2G479110 Zea mays GRMZM2G479110 I 0.663
LPERR06G04900 Leersia perrieri LPERR06G04900 I 0.663
MLOC_61880 Hordeum vulgare MLOC_61880 I 0.663
OB02G42700 Oryza brachyantha OB02G42700 I 0.663
F775_19079 Aegilops tauschii F775_19079 I 0.663
ONIVA06G06160 Oryza nivara ONIVA06G06160 I 0.663
ORGLA06G0048800 Oryza glaberrima ORGLA06G0048800 I 0.663
Pavir.J35630 Panicum virgatum Pavir.J35630 I 0.663
RR23 Oryza indica BGIOSGA005436 I 0.663
Pavir.J08270 Panicum virgatum Pavir.J08270 I 0.663
RR22 Oryza indica BGIOSGA022430 I 0.663
OPUNC06G05150 Oryza punctata OPUNC06G05150 I 0.663
Pavir.Da02067 Panicum virgatum Pavir.Da02067 I 0.663
ORUFI06G05490 Oryza rufipogon ORUFI06G05490 I 0.663