gw1.12.455.1 (Ostreococcus RCC809)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gw1.12.455.1 T285054_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARR1
M02296_2.00 		Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN		 PBM
Weirauch et al.(2014)
pTH8257 		0.690 0.702
ARR1
M02297_2.00 		Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN		 PBM
Weirauch et al.(2014)
pTH8590 		0.690 0.702
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.12.455.1 Myb 4 54

Links

Other Myb/SANT family TFs
Other Ostreococcus RCC809 TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OSTLU_26838 Ostreococcus lucimarinus OSTLU_26838 I 0.860
1200010147 Ostreococcus tauri 1200010147 I 0.796
e_gw1.42.55.1 Physcomitrella patens e_gw1.42.55.1 I 0.729
Ciclev10007648m.g Citrus clementina Ciclev10007648m.g I 0.717
orange1.1g005719m.g Citrus sinensis orange1.1g005719m.g I 0.717
SELMODRAFT_447635 Selaginella moellendorffii SELMODRAFT_447635 I 0.708
Lus10040780.g Linum usitatissimum Lus10040780.g I 0.707
gw1.49.140.1 Volvox carteri gw1.49.140.1 N 0.705
CHLREDRAFT_130971 Chlamydomonas reinhardtii CHLREDRAFT_130971 I 0.705
gw1.15.242.1 Coccomyxa subellipsoidea C169 gw1.15.242.1 I 0.699
fgeneshCV_pg.C_scaffold_15000185 Chlorella vulgaris fgeneshCV_pg.C_scaffold_15000185 I 0.699
PK09202.1 Cannabis sativa PK09202.1 I 0.695
gw1.31.134.1 Physcomitrella patens gw1.31.134.1 I 0.695
Lus10037719.g Linum usitatissimum Lus10037719.g I 0.690
Carubv10007581m.g Capsella rubella Carubv10007581m.g I 0.690
Cagra.5497s0018 Capsella grandiflora Cagra.5497s0018 I 0.690
Bostr.30275s0051 Boechera stricta Bostr.30275s0051 I 0.690
Cagra.0053s0018 Capsella grandiflora Cagra.0053s0018 I 0.690
Bostr.28625s0008 Boechera stricta Bostr.28625s0008 I 0.690
Thhalv10024686m.g Eutrema salsugineum Thhalv10024686m.g I 0.690
Bo7g104190 Brassica oleracea Bo7g104190 I 0.690
Bra001643 Brassica rapa Bra001643 I 0.690
Bo5g123620 Brassica oleracea Bo5g123620 I 0.690
Bo3g068550 Brassica oleracea Bo3g068550 I 0.690
ARR1 Arabidopsis thaliana AT3G16857 D 0.690
Bo1g055180 Brassica oleracea Bo1g055180 I 0.690
Bra012743 Brassica rapa Bra012743 I 0.690
Bra022183 Brassica rapa Bra022183 I 0.690
ARR2 Arabidopsis lyrata scaffold_702902.1 I 0.690
Carubv10013107m.g Capsella rubella Carubv10013107m.g I 0.690
Lus10016846.g Linum usitatissimum Lus10016846.g I 0.690
GSMUA_Achr9G16610_001 Musa acuminata GSMUA_Achr9G16610_001 I 0.690
Bra033527 Brassica rapa Bra033527 I 0.690
estExt_Genewise1.C_90203 Chlorella NC64A estExt_Genewise1.C_90203 I 0.685
Bostr.0556s0001 Boechera stricta Bostr.0556s0001 I 0.681
Lus10005340.g Linum usitatissimum Lus10005340.g I 0.679
Ca_09080 Cicer arietinum Ca_09080 I 0.679
29848.m004559 Ricinus communis 29848.m004559 I 0.679
Lus10041020.g Linum usitatissimum Lus10041020.g I 0.679
SELMODRAFT_444702 Selaginella moellendorffii SELMODRAFT_444702 I 0.669
SapurV1A.1916s0020 Salix purpurea SapurV1A.1916s0020 I 0.661
SapurV1A.0159s0180 Salix purpurea SapurV1A.0159s0180 I 0.661
gw1.27.80.1 Physcomitrella patens gw1.27.80.1 I 0.661
POPTR_0016s03240 Populus trichocarpa POPTR_0016s03240 I 0.661
POPTR_0006s03340 Populus trichocarpa POPTR_0006s03340 I 0.661
GLYMA05G34516 Glycine max GLYMA05G34516 I 0.661
SELMODRAFT_36646 Selaginella moellendorffii SELMODRAFT_36646 I 0.661
gw1.104.128.1 Physcomitrella patens gw1.104.128.1 I 0.661
gw1.29.165.1 Physcomitrella patens gw1.29.165.1 I 0.661
gw1.29.164.1 Physcomitrella patens gw1.29.164.1 I 0.661
AMTR_s00101p00128190 Amborella trichopoda AMTR_s00101p00128190 I 0.661
EuGene.0600010100 Micromonas sp RCC299 EuGene.0600010100 I 0.661