chr3.LjT47O18.40.nc (Lotus japonicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 chr3.LjT47O18.40.nc T290707_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr3.LjT47O18.40.nc Myb 14 61
chr3.LjT47O18.40.nc Myb 67 112

Links

Other Myb/SANT family TFs
Other Lotus japonicus TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29933.m001454 Ricinus communis 29933.m001454 N 0.667
cassava26894.m1 Manihot esculenta cassava26894.m1 N 0.732
Ca_22597 Cicer arietinum Ca_22597 N 0.862
chr3.LjT47O18.60.nc Lotus japonicus chr3.LjT47O18.60.nc N 0.873
chr3.LjT47O18.70.nc Lotus japonicus chr3.LjT47O18.70.nc N 0.673
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I 0.697
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.677
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.672
evm.TU.supercontig_34.62 Carica papaya evm.TU.supercontig_34.62 N 0.684
gene01998-v1.0-hybrid Fragaria vesca gene01998-v1.0-hybrid N 0.805
gene30736-v1.0-hybrid Fragaria vesca gene30736-v1.0-hybrid N 0.663
GLYMA06G45520 Glycine max GLYMA06G45520 N 0.688
GLYMA06G45531 Glycine max GLYMA06G45531 N 0.688
GLYMA06G45540 Glycine max GLYMA06G45540 N 0.790
GLYMA06G45547 Glycine max GLYMA06G45547 N 0.826
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.704
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.721
GLYMA12G11340 Glycine max GLYMA12G11340 N 0.801
GLYMA12G11390 Glycine max GLYMA12G11390 N 0.783
GLYMA12G11490 Glycine max GLYMA12G11490 N 0.688
GLYMA12G32530 Glycine max GLYMA12G32530 I 0.722
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.747
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.719
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.771
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.756
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.767
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I 0.662
Lus10018547.g Linum usitatissimum Lus10018547.g N 0.749
Lus10031607.g Linum usitatissimum Lus10031607.g N 0.724
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.726
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.760
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.759
Lus10039772.g Linum usitatissimum Lus10039772.g N 0.689
MDP0000155426 Malus domestica MDP0000155426 I 0.786
MDP0000407613 Malus domestica MDP0000407613 N 0.783
MTR_0008s0390 Medicago truncatula MTR_0008s0390 N 0.876
MTR_0008s0470 Medicago truncatula MTR_0008s0470 N 0.806
MTR_0251s0050 Medicago truncatula MTR_0251s0050 N 0.844
MTR_2g089420 Medicago truncatula MTR_2g089420 N 0.759
MTR_2g089450 Medicago truncatula MTR_2g089450 N 0.749
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.673
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.670
PGSC0003DMG400013752 Solanum tuberosum PGSC0003DMG400013752 N 0.732
PGSC0003DMG400026176 Solanum tuberosum PGSC0003DMG400026176 N 0.662
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I 0.676
PGSC0003DMG402026177 Solanum tuberosum PGSC0003DMG402026177 I 0.665
PK24260.1 Cannabis sativa PK24260.1 N 0.763
Pm015302 Prunus mume Pm015302 N 0.769
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.752
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.714
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.769
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.749
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.727
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I 0.676
Solyc07g053240.2 Solanum lycopersicum Solyc07g053240.2 I 0.666
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I 0.695
Solyc12g005640.1 Solanum lycopersicum Solyc12g005640.1 N 0.732
TCM_007865 Theobroma cacao TCM_007865 I 0.753
VIT_00s0203g00170 Vitis vinifera VIT_00s0203g00170 N 0.677
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.716
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.678