CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr3.LjT47O18.40.nc
(
Lotus japonicus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
chr3.LjT47O18.40.nc
T290707_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr3.LjT47O18.40.nc
Myb
14
61
KGTWTAEEDRKLTAYVTRYGCWNWRQLPKFAGLARCGKSCRLRWLNYL
chr3.LjT47O18.40.nc
Myb
67
112
RGNYTQEEEEIIIRMHKKLGNRWSTIAAELPGRTDNEVKNHWHTSL
Links
Other
Myb/SANT
family TFs
Other
Lotus japonicus
TFs
61 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_0008s0390
Medicago truncatula
MTR_0008s0390
N
0.876
chr3.LjT47O18.60.nc
Lotus japonicus
chr3.LjT47O18.60.nc
N
0.873
Ca_22597
Cicer arietinum
Ca_22597
N
0.862
MTR_0251s0050
Medicago truncatula
MTR_0251s0050
N
0.844
GLYMA06G45547
Glycine max
GLYMA06G45547
N
0.826
MTR_0008s0470
Medicago truncatula
MTR_0008s0470
N
0.806
gene01998-v1.0-hybrid
Fragaria vesca
gene01998-v1.0-hybrid
N
0.805
GLYMA12G11340
Glycine max
GLYMA12G11340
N
0.801
GLYMA06G45540
Glycine max
GLYMA06G45540
N
0.790
MDP0000155426
Malus domestica
MDP0000155426
I
0.786
MDP0000407613
Malus domestica
MDP0000407613
N
0.783
GLYMA12G11390
Glycine max
GLYMA12G11390
N
0.783
Gorai.002G016800
Gossypium raimondii
Gorai.002G016800
I
0.771
Pm015302
Prunus mume
Pm015302
N
0.769
PRUPE_ppa026553mg
Prunus persica
PRUPE_ppa026553mg
N
0.769
Gorai.012G132400
Gossypium raimondii
Gorai.012G132400
I
0.767
PK24260.1
Cannabis sativa
PK24260.1
N
0.763
Lus10039734.g
Linum usitatissimum
Lus10039734.g
I
0.760
MTR_2g089420
Medicago truncatula
MTR_2g089420
N
0.759
Lus10039735.g
Linum usitatissimum
Lus10039735.g
I
0.759
Gorai.005G206800
Gossypium raimondii
Gorai.005G206800
N
0.756
TCM_007865
Theobroma cacao
TCM_007865
I
0.753
POPTR_0013s14560
Populus trichocarpa
POPTR_0013s14560
I
0.752
Lus10018547.g
Linum usitatissimum
Lus10018547.g
N
0.749
MTR_2g089450
Medicago truncatula
MTR_2g089450
N
0.749
SapurV1A.0048s0160
Salix purpurea
SapurV1A.0048s0160
N
0.749
GLYMA12G32541
Glycine max
GLYMA12G32541
N
0.747
cassava26894.m1
Manihot esculenta
cassava26894.m1
N
0.732
PGSC0003DMG400013752
Solanum tuberosum
PGSC0003DMG400013752
N
0.732
Solyc12g005640.1
Solanum lycopersicum
Solyc12g005640.1
N
0.732
SapurV1A.0417s0130
Salix purpurea
SapurV1A.0417s0130
I
0.727
Lus10033738.g
Linum usitatissimum
Lus10033738.g
N
0.726
Lus10031607.g
Linum usitatissimum
Lus10031607.g
N
0.724
GLYMA12G32530
Glycine max
GLYMA12G32530
I
0.722
GLYMA12G11330
Glycine max
GLYMA12G11330
I
0.721
GLYMA13G37903
Glycine max
GLYMA13G37903
I
0.719
VIT_12s0134g00480
Vitis vinifera
VIT_12s0134g00480
I
0.716
POPTR_0019s14140
Populus trichocarpa
POPTR_0019s14140
N
0.714
GLYMA06G45554
Glycine max
GLYMA06G45554
I
0.704
Ciclev10016303m.g
Citrus clementina
Ciclev10016303m.g
I
0.697
Solyc07g054980.1
Solanum lycopersicum
Solyc07g054980.1
I
0.695
Lus10039772.g
Linum usitatissimum
Lus10039772.g
N
0.689
GLYMA06G45531
Glycine max
GLYMA06G45531
N
0.688
GLYMA12G11490
Glycine max
GLYMA12G11490
N
0.688
GLYMA06G45520
Glycine max
GLYMA06G45520
N
0.688
evm.TU.supercontig_34.62
Carica papaya
evm.TU.supercontig_34.62
N
0.684
VIT_12s0134g00490
Vitis vinifera
VIT_12s0134g00490
I
0.678
VIT_00s0203g00170
Vitis vinifera
VIT_00s0203g00170
N
0.677
Ciclev10017679m.g
Citrus clementina
Ciclev10017679m.g
I
0.677
Solyc07g053230.2
Solanum lycopersicum
Solyc07g053230.2
I
0.676
PGSC0003DMG401026177
Solanum tuberosum
PGSC0003DMG401026177
I
0.676
chr3.LjT47O18.70.nc
Lotus japonicus
chr3.LjT47O18.70.nc
N
0.673
orange1.1g024860m.g
Citrus sinensis
orange1.1g024860m.g
I
0.673
Eucgr.A01766
Eucalyptus grandis
Eucgr.A01766
I
0.672
orange1.1g037956m.g
Citrus sinensis
orange1.1g037956m.g
N
0.670
29933.m001454
Ricinus communis
29933.m001454
N
0.667
Solyc07g053240.2
Solanum lycopersicum
Solyc07g053240.2
I
0.666
PGSC0003DMG402026177
Solanum tuberosum
PGSC0003DMG402026177
I
0.665
gene30736-v1.0-hybrid
Fragaria vesca
gene30736-v1.0-hybrid
N
0.663
GSMUA_Achr11G22820_001
Musa acuminata
GSMUA_Achr11G22820_001
I
0.662
PGSC0003DMG400026176
Solanum tuberosum
PGSC0003DMG400026176
N
0.662