POPTR_0019s14140 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0019s14140 T278545_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0019s14140.1 Myb 14 61
POPTR_0019s14140.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.843
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.822
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.819
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.798
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.773
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I 0.765
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I 0.765
TCM_007865 Theobroma cacao TCM_007865 I 0.762
PGSC0003DMG402026177 Solanum tuberosum PGSC0003DMG402026177 I 0.760
MDP0000155426 Malus domestica MDP0000155426 I 0.756
Solyc07g053240.2 Solanum lycopersicum Solyc07g053240.2 I 0.755
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.750
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I 0.747
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.744
PGSC0003DMG400026176 Solanum tuberosum PGSC0003DMG400026176 N 0.743
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.743
GLYMA12G11390 Glycine max GLYMA12G11390 N 0.738
cassava26894.m1 Manihot esculenta cassava26894.m1 N 0.737
gene01998-v1.0-hybrid Fragaria vesca gene01998-v1.0-hybrid N 0.737
MDP0000407613 Malus domestica MDP0000407613 N 0.736
Pm015302 Prunus mume Pm015302 N 0.735
Pm009880 Prunus mume Pm009880 N 0.735
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.735
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.730
GLYMA06G45540 Glycine max GLYMA06G45540 N 0.729
PRUPE_ppa015081mg Prunus persica PRUPE_ppa015081mg N 0.724
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.723
Solyc07g055000.1 Solanum lycopersicum Solyc07g055000.1 N 0.720
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.719
chr3.LjT47O18.40.nc Lotus japonicus chr3.LjT47O18.40.nc N 0.714
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.714
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.714
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I 0.712
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I 0.711
GLYMA06G45547 Glycine max GLYMA06G45547 N 0.710
MDP0000131822 Malus domestica MDP0000131822 I 0.710
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.709
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.708
PK24260.1 Cannabis sativa PK24260.1 N 0.707
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.705
TCM_030020 Theobroma cacao TCM_030020 I 0.705
TRIUR3_31731 Triticum urartu TRIUR3_31731 I 0.704
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.701
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I 0.700
29933.m001454 Ricinus communis 29933.m001454 N 0.700
GLYMA12G32530 Glycine max GLYMA12G32530 I 0.699
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.699
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.699
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.699
MTR_0008s0470 Medicago truncatula MTR_0008s0470 N 0.699
MTR_2g089450 Medicago truncatula MTR_2g089450 N 0.699
Lus10022021.g Linum usitatissimum Lus10022021.g I 0.698
GLYMA06G45531 Glycine max GLYMA06G45531 N 0.697
evm.TU.supercontig_34.62 Carica papaya evm.TU.supercontig_34.62 N 0.696
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.693
Gorai.010G148300 Gossypium raimondii Gorai.010G148300 N 0.693
chr3.LjT47O18.60.nc Lotus japonicus chr3.LjT47O18.60.nc N 0.693
GLYMA12G11490 Glycine max GLYMA12G11490 N 0.691
PGSC0003DMG400013752 Solanum tuberosum PGSC0003DMG400013752 N 0.691
Solyc12g005640.1 Solanum lycopersicum Solyc12g005640.1 N 0.691
Eucgr.A01767 Eucalyptus grandis Eucgr.A01767 I 0.690
Lus10042561.g Linum usitatissimum Lus10042561.g I 0.690
MTR_2g089420 Medicago truncatula MTR_2g089420 N 0.690
MTR_0008s0390 Medicago truncatula MTR_0008s0390 N 0.689
MTR_0251s0050 Medicago truncatula MTR_0251s0050 N 0.688
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I 0.688
Eucgr.D00040 Eucalyptus grandis Eucgr.D00040 I 0.688
chr3.LjT47O18.70.nc Lotus japonicus chr3.LjT47O18.70.nc N 0.687
Eucgr.L02563 Eucalyptus grandis Eucgr.L02563 N 0.685
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.685
GLYMA06G45520 Glycine max GLYMA06G45520 N 0.685
OB0039G10010 Oryza brachyantha OB0039G10010 I 0.684
GLYMA12G11340 Glycine max GLYMA12G11340 N 0.684
MDP0000289283 Malus domestica MDP0000289283 I 0.683
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.682
cassava5263.m1 Manihot esculenta cassava5263.m1 N 0.681
BGIOSGA031688 Oryza indica BGIOSGA031688 I 0.679
OS10G0478300 Oryza sativa OS10G0478300 I 0.679
ORUFI10G14060 Oryza rufipogon ORUFI10G14060 I 0.679
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I 0.678
GSMUA_Achr8G14540_001 Musa acuminata GSMUA_Achr8G14540_001 N 0.676
gene30736-v1.0-hybrid Fragaria vesca gene30736-v1.0-hybrid N 0.676
Gorai.013G072900 Gossypium raimondii Gorai.013G072900 I 0.675
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I 0.675
Gorai.013G071600 Gossypium raimondii Gorai.013G071600 I 0.675
Lus10039771.g Linum usitatissimum Lus10039771.g N 0.674
TCM_007868 Theobroma cacao TCM_007868 I 0.672
Pavir.Gb00650 Panicum virgatum Pavir.Gb00650 I 0.672
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.671
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.671
POPTR_0008s16660 Populus trichocarpa POPTR_0008s16660 I 0.671
PK29337.1 Cannabis sativa PK29337.1 I 0.670
Ca_22597 Cicer arietinum Ca_22597 N 0.670
ORUFI04G20280 Oryza rufipogon ORUFI04G20280 I 0.669
Cla006077 Citrullus lanatus Cla006077 I 0.669
cassava47180.m1 Manihot esculenta cassava47180.m1 I 0.669
ORGLA04G0158700 Oryza glaberrima ORGLA04G0158700 I 0.669
PK20358.1 Cannabis sativa PK20358.1 I 0.669
Si010814m.g Setaria italica Si010814m.g I 0.669
GSMUA_Achr11G00410_001 Musa acuminata GSMUA_Achr11G00410_001 I 0.668
Solyc10g005460.2 Solanum lycopersicum Solyc10g005460.2 I 0.668
Eucgr.D00044 Eucalyptus grandis Eucgr.D00044 N 0.667
Lus10018547.g Linum usitatissimum Lus10018547.g N 0.667
Lus10039772.g Linum usitatissimum Lus10039772.g N 0.667
TCM_026197 Theobroma cacao TCM_026197 I 0.666
PK08038.1 Cannabis sativa PK08038.1 I 0.665
PGSC0003DMG400011250 Solanum tuberosum PGSC0003DMG400011250 I 0.665
PGSC0003DMG400016292 Solanum tuberosum PGSC0003DMG400016292 I 0.663
Solyc06g053610.2 Solanum lycopersicum Solyc06g053610.2 I 0.663
BGIOSGA016822 Oryza indica BGIOSGA016822 I 0.663
ORUFI04G21320 Oryza rufipogon ORUFI04G21320 I 0.663
Eucgr.D00751 Eucalyptus grandis Eucgr.D00751 I 0.663
MTR_2g067420 Medicago truncatula MTR_2g067420 I 0.663
OB04G26860 Oryza brachyantha OB04G26860 I 0.663
ONIVA04G17990 Oryza nivara ONIVA04G17990 I 0.663
TCM_020889 Theobroma cacao TCM_020889 I 0.663
ORGLA04G0169000 Oryza glaberrima ORGLA04G0169000 I 0.663
Ciclev10022057m.g Citrus clementina Ciclev10022057m.g I 0.662
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.662
SapurV1A.0028s0640 Salix purpurea SapurV1A.0028s0640 N 0.662
cassava25784.m1 Manihot esculenta cassava25784.m1 I 0.661
PGSC0003DMG400015087 Solanum tuberosum PGSC0003DMG400015087 N 0.661