CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.D00042
(
Eucalyptus grandis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Eucgr.D00042
T286811_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AtMYB41
M07109_2.00
Arabidopsis thaliana
DHDBBYYACCTAMYW
WRKTAGGTRRVVHDH
Dap-seq
OMalley et al.(2016)
MYB41_col_a
0.696
0.677
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.D00042.1
Myb
18
65
KGAWSAEEDQKLVTYIKRYGIWNWTHMAKPAGLARTGKSCRLRWMNYL
Eucgr.D00042.1
Myb
71
116
HGNITKEEEETIIALHRVLGNRWAAIAARLPGRTDNEIKNYWNTRL
Links
Other
Myb/SANT
family TFs
Other
Eucalyptus grandis
TFs
99 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Eucgr.D00040
Eucalyptus grandis
Eucgr.D00040
I
0.902
Eucgr.D00044
Eucalyptus grandis
Eucgr.D00044
N
0.840
Eucgr.I00828
Eucalyptus grandis
Eucgr.I00828
N
0.814
Eucgr.D00037
Eucalyptus grandis
Eucgr.D00037
N
0.801
Eucgr.D00050
Eucalyptus grandis
Eucgr.D00050
N
0.793
Eucgr.L02563
Eucalyptus grandis
Eucgr.L02563
N
0.777
Gorai.011G021300
Gossypium raimondii
Gorai.011G021300
N
0.776
MDP0000289283
Malus domestica
MDP0000289283
I
0.769
MDP0000131822
Malus domestica
MDP0000131822
I
0.768
TCM_030020
Theobroma cacao
TCM_030020
I
0.761
POPTR_0011s04020
Populus trichocarpa
POPTR_0011s04020
N
0.757
Gorai.010G148300
Gossypium raimondii
Gorai.010G148300
N
0.755
evm.TU.supercontig_27.156
Carica papaya
evm.TU.supercontig_27.156
N
0.754
Ciclev10017679m.g
Citrus clementina
Ciclev10017679m.g
I
0.749
SapurV1A.0028s0640
Salix purpurea
SapurV1A.0028s0640
N
0.744
orange1.1g037956m.g
Citrus sinensis
orange1.1g037956m.g
N
0.742
cassava5261.m1
Manihot esculenta
cassava5261.m1
N
0.739
cassava5263.m1
Manihot esculenta
cassava5263.m1
N
0.738
POPTR_0004s02570
Populus trichocarpa
POPTR_0004s02570
I
0.735
Pm009880
Prunus mume
Pm009880
N
0.726
PRUPE_ppa015081mg
Prunus persica
PRUPE_ppa015081mg
N
0.726
gene30736-v1.0-hybrid
Fragaria vesca
gene30736-v1.0-hybrid
N
0.724
Gorai.013G143000
Gossypium raimondii
Gorai.013G143000
N
0.723
Gorai.002G016800
Gossypium raimondii
Gorai.002G016800
I
0.720
GLYMA06G45554
Glycine max
GLYMA06G45554
I
0.720
GLYMA12G11330
Glycine max
GLYMA12G11330
I
0.720
Gorai.013G143100
Gossypium raimondii
Gorai.013G143100
N
0.717
Gorai.013G143200
Gossypium raimondii
Gorai.013G143200
I
0.715
VIT_12s0134g00480
Vitis vinifera
VIT_12s0134g00480
I
0.715
TCM_007865
Theobroma cacao
TCM_007865
I
0.714
POPTR_0013s14560
Populus trichocarpa
POPTR_0013s14560
I
0.712
TCM_033016
Theobroma cacao
TCM_033016
N
0.710
SapurV1A.0048s0160
Salix purpurea
SapurV1A.0048s0160
N
0.709
VIT_00s0203g00170
Vitis vinifera
VIT_00s0203g00170
N
0.709
MDP0000155426
Malus domestica
MDP0000155426
I
0.708
SapurV1A.0417s0130
Salix purpurea
SapurV1A.0417s0130
I
0.705
POPTR_0011s04010
Populus trichocarpa
POPTR_0011s04010
N
0.704
GSMUA_Achr4G21910_001
Musa acuminata
GSMUA_Achr4G21910_001
I
0.704
Gorai.012G132400
Gossypium raimondii
Gorai.012G132400
I
0.702
Ciclev10017435m.g
Citrus clementina
Ciclev10017435m.g
I
0.701
Ciclev10018311m.g
Citrus clementina
Ciclev10018311m.g
I
0.701
TCM_007868
Theobroma cacao
TCM_007868
I
0.698
Lus10039734.g
Linum usitatissimum
Lus10039734.g
I
0.698
Lus10039735.g
Linum usitatissimum
Lus10039735.g
I
0.698
PDK_20s1320951g001
Phoenix dactylifera
PDK_20s1320951g001
I
0.697
Carubv10007810m.g
Capsella rubella
Carubv10007810m.g
I
0.696
AtMYB41
Arabidopsis thaliana
AT4G28110
D
0.696
Bostr.7867s0646
Boechera stricta
Bostr.7867s0646
I
0.696
Cagra.1225s0085
Capsella grandiflora
Cagra.1225s0085
I
0.696
VIT_12s0134g00490
Vitis vinifera
VIT_12s0134g00490
I
0.695
TCM_033015
Theobroma cacao
TCM_033015
N
0.693
AtMYB41
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_7001108
I
0.692
29933.m001454
Ricinus communis
29933.m001454
N
0.692
orange1.1g042846m.g
Citrus sinensis
orange1.1g042846m.g
I
0.690
cassava6764.valid.m1
Manihot esculenta
cassava6764.valid.m1
I
0.689
Gorai.005G206800
Gossypium raimondii
Gorai.005G206800
N
0.688
Ciclev10022057m.g
Citrus clementina
Ciclev10022057m.g
I
0.688
AMTR_s00032p00057800
Amborella trichopoda
AMTR_s00032p00057800
I
0.688
POPTR_0019s14140
Populus trichocarpa
POPTR_0019s14140
N
0.688
MDP0000407613
Malus domestica
MDP0000407613
N
0.688
Pm015302
Prunus mume
Pm015302
N
0.687
PRUPE_ppa026553mg
Prunus persica
PRUPE_ppa026553mg
N
0.687
Cucsa.148040
Cucumis sativus
Cucsa.148040
I
0.684
Cla007838
Citrullus lanatus
Cla007838
I
0.684
TCM_026197
Theobroma cacao
TCM_026197
I
0.683
PGSC0003DMG400026628
Solanum tuberosum
PGSC0003DMG400026628
I
0.681
Solyc10g008700.1
Solanum lycopersicum
Solyc10g008700.1
I
0.681
Lus10033738.g
Linum usitatissimum
Lus10033738.g
N
0.680
Bra026281
Brassica rapa
Bra026281
I
0.679
Thhalv10027463m.g
Eutrema salsugineum
Thhalv10027463m.g
I
0.679
Bra024224
Brassica rapa
Bra024224
I
0.679
Bo7g111870
Brassica oleracea
Bo7g111870
I
0.679
Bo1g051220
Brassica oleracea
Bo1g051220
I
0.679
Eucgr.D00751
Eucalyptus grandis
Eucgr.D00751
I
0.678
Lus10031607.g
Linum usitatissimum
Lus10031607.g
N
0.677
Cucsa.126220
Cucumis sativus
Cucsa.126220
I
0.677
Cla019747
Citrullus lanatus
Cla019747
I
0.677
cassava25784.m1
Manihot esculenta
cassava25784.m1
I
0.676
Thhalv10008531m.g
Eutrema salsugineum
Thhalv10008531m.g
I
0.676
PK24260.1
Cannabis sativa
PK24260.1
N
0.675
orange1.1g024860m.g
Citrus sinensis
orange1.1g024860m.g
I
0.675
Ciclev10017677m.g
Citrus clementina
Ciclev10017677m.g
I
0.674
GLYMA12G32541
Glycine max
GLYMA12G32541
N
0.673
GSMUA_Achr5G14600_001
Musa acuminata
GSMUA_Achr5G14600_001
I
0.673
PGSC0003DMG400018331
Solanum tuberosum
PGSC0003DMG400018331
I
0.672
Solyc07g054840.2
Solanum lycopersicum
Solyc07g054840.2
I
0.672
GSMUA_Achr8G14540_001
Musa acuminata
GSMUA_Achr8G14540_001
N
0.672
POPTR_0011s04000
Populus trichocarpa
POPTR_0011s04000
N
0.668
GSMUA_Achr9G12180_001
Musa acuminata
GSMUA_Achr9G12180_001
I
0.668
GSMUA_Achr11G22820_001
Musa acuminata
GSMUA_Achr11G22820_001
I
0.667
Eucgr.A01766
Eucalyptus grandis
Eucgr.A01766
I
0.666
Eucgr.H00158
Eucalyptus grandis
Eucgr.H00158
I
0.666
Gorai.013G071600
Gossypium raimondii
Gorai.013G071600
I
0.664
PK20358.1
Cannabis sativa
PK20358.1
I
0.664
Gorai.013G072900
Gossypium raimondii
Gorai.013G072900
I
0.664
cassava26894.m1
Manihot esculenta
cassava26894.m1
N
0.661
GSMUA_Achr4G28850_001
Musa acuminata
GSMUA_Achr4G28850_001
I
0.661
Gorai.008G151100
Gossypium raimondii
Gorai.008G151100
I
0.661
Solyc03g093940.1
Solanum lycopersicum
Solyc03g093940.1
N
0.661