POPTR_0011s04020 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0011s04020 T278410_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0011s04020.1 Myb 15 62
POPTR_0011s04020.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0011s04010 Populus trichocarpa POPTR_0011s04010 N 0.798
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I 0.757
Eucgr.D00040 Eucalyptus grandis Eucgr.D00040 I 0.757
POPTR_0011s04000 Populus trichocarpa POPTR_0011s04000 N 0.756
TCM_033016 Theobroma cacao TCM_033016 N 0.750
POPTR_0004s02570 Populus trichocarpa POPTR_0004s02570 I 0.736
29933.m001454 Ricinus communis 29933.m001454 N 0.736
cassava5261.m1 Manihot esculenta cassava5261.m1 N 0.734
Eucgr.D00050 Eucalyptus grandis Eucgr.D00050 N 0.731
Eucgr.D00037 Eucalyptus grandis Eucgr.D00037 N 0.728
TCM_033015 Theobroma cacao TCM_033015 N 0.725
cassava5263.m1 Manihot esculenta cassava5263.m1 N 0.724
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.723
MDP0000289283 Malus domestica MDP0000289283 I 0.722
SapurV1A.0028s0640 Salix purpurea SapurV1A.0028s0640 N 0.719
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.719
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.718
MDP0000131822 Malus domestica MDP0000131822 I 0.718
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.715
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.713
Gorai.010G148300 Gossypium raimondii Gorai.010G148300 N 0.712
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.711
Gorai.013G143000 Gossypium raimondii Gorai.013G143000 N 0.710
MDP0000155426 Malus domestica MDP0000155426 I 0.708
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.708
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.708
TCM_030020 Theobroma cacao TCM_030020 I 0.705
TCM_007865 Theobroma cacao TCM_007865 I 0.702
Gorai.013G143200 Gossypium raimondii Gorai.013G143200 I 0.702
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.699
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.698
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.697
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.697
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I 0.695
VIT_00s0203g00170 Vitis vinifera VIT_00s0203g00170 N 0.694
gene30736-v1.0-hybrid Fragaria vesca gene30736-v1.0-hybrid N 0.693
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.691
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.690
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.690
Pm009880 Prunus mume Pm009880 N 0.689
Eucgr.D00044 Eucalyptus grandis Eucgr.D00044 N 0.688
Gorai.013G143100 Gossypium raimondii Gorai.013G143100 N 0.688
PK20358.1 Cannabis sativa PK20358.1 I 0.687
POPTR_0005s24550 Populus trichocarpa POPTR_0005s24550 I 0.687
cassava37350.valid.m1 Manihot esculenta cassava37350.valid.m1 I 0.687
MDP0000407613 Malus domestica MDP0000407613 N 0.687
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.686
Pm015302 Prunus mume Pm015302 N 0.686
Eucgr.L02563 Eucalyptus grandis Eucgr.L02563 N 0.683
cassava25784.m1 Manihot esculenta cassava25784.m1 I 0.683
GLYMA03G31980 Glycine max GLYMA03G31980 I 0.681
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I 0.681
GSMUA_Achr1G09180_001 Musa acuminata GSMUA_Achr1G09180_001 I 0.680
GLYMA20G35180 Glycine max GLYMA20G35180 I 0.679
GLYMA10G32410 Glycine max GLYMA10G32410 I 0.679
Gorai.011G173900 Gossypium raimondii Gorai.011G173900 I 0.679
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I 0.678
PRUPE_ppa015081mg Prunus persica PRUPE_ppa015081mg N 0.678
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.678
Cla006077 Citrullus lanatus Cla006077 I 0.678
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.677
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.676
29933.m001453 Ricinus communis 29933.m001453 N 0.676
Si017704m.g Setaria italica Si017704m.g I 0.676
Pavir.Aa01159 Panicum virgatum Pavir.Aa01159 I 0.676
SapurV1A.0233s0280 Salix purpurea SapurV1A.0233s0280 I 0.675
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.675
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.674
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.674
GSMUA_Achr4G18180_001 Musa acuminata GSMUA_Achr4G18180_001 I 0.673
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.673
Pavir.J10932 Panicum virgatum Pavir.J10932 I 0.673
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.672
TRIUR3_18702 Triticum urartu TRIUR3_18702 I 0.672
Traes_2DL_D39684C41 Triticum aestivum Traes_2DL_D39684C41 I 0.672
Traes_2DL_54E6F0446 Triticum aestivum Traes_2DL_54E6F0446 I 0.672
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.672
F775_18231 Aegilops tauschii F775_18231 I 0.672
MLOC_53640 Hordeum vulgare MLOC_53640 I 0.672
Traes_2AL_CC403D182 Triticum aestivum Traes_2AL_CC403D182 I 0.672
Traes_2BL_FD8C2F815 Triticum aestivum Traes_2BL_FD8C2F815 I 0.672
Traes_2BL_34A0848F2 Triticum aestivum Traes_2BL_34A0848F2 I 0.672
Lus10031607.g Linum usitatissimum Lus10031607.g N 0.671
Eucgr.I00828 Eucalyptus grandis Eucgr.I00828 N 0.671
Lus10003557.g Linum usitatissimum Lus10003557.g I 0.670
Lus10033889.g Linum usitatissimum Lus10033889.g I 0.670
Gorai.007G146200 Gossypium raimondii Gorai.007G146200 I 0.670
Ciclev10017435m.g Citrus clementina Ciclev10017435m.g I 0.670
TCM_004046 Theobroma cacao TCM_004046 I 0.670
Cucsa.053600 Cucumis sativus Cucsa.053600 I 0.670
Ciclev10021699m.g Citrus clementina Ciclev10021699m.g I 0.670
Ciclev10018311m.g Citrus clementina Ciclev10018311m.g I 0.670
Gorai.001G177100 Gossypium raimondii Gorai.001G177100 I 0.670
Bo4g176030 Brassica oleracea Bo4g176030 I 0.669
Thhalv10017136m.g Eutrema salsugineum Thhalv10017136m.g I 0.669
Bo4g176020 Brassica oleracea Bo4g176020 I 0.669
ATMYB14 Arabidopsis lyrata Al_scaffold_0004_1573 I 0.669
Bra021708 Brassica rapa Bra021708 I 0.669
Bra018267 Brassica rapa Bra018267 I 0.669
MYB14 Arabidopsis thaliana AT2G31180 I 0.669
POPTR_0002s03960 Populus trichocarpa POPTR_0002s03960 I 0.668
SapurV1A.0006s0790 Salix purpurea SapurV1A.0006s0790 I 0.668
PK03488.1 Cannabis sativa PK03488.1 I 0.668
GLYMA03G41100 Glycine max GLYMA03G41100 I 0.666
Bo3g025100 Brassica oleracea Bo3g025100 I 0.666
TCM_020889 Theobroma cacao TCM_020889 I 0.665
PK24260.1 Cannabis sativa PK24260.1 N 0.664
GSMUA_Achr4G28850_001 Musa acuminata GSMUA_Achr4G28850_001 I 0.663
GRMZM2G127857 Zea mays GRMZM2G127857 I 0.662
SapurV1A.0021s0930 Salix purpurea SapurV1A.0021s0930 I 0.662
Sb06g027180 Sorghum bicolor Sb06g027180 I 0.661
BRADI5G20130 Brachypodium distachyon BRADI5G20130 I 0.661
OB04G30570 Oryza brachyantha OB04G30570 I 0.661
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.661
GLYMA19G34740 Glycine max GLYMA19G34740 I 0.661