CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Eucgr.I00828
(
Eucalyptus grandis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Eucgr.I00828
T286919_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.I00828.1
Myb
19
66
KGAWSADEDRKLVAYIMRYGIWNWTHMVEPAGLARTGKSCRLRWMNYL
Eucgr.I00828.1
Myb
72
117
HGNITKEEEEIIINLHRVLGKRWATIASRLPGRTDNEIKNYWNTHL
Links
Other
Myb/SANT
family TFs
Other
Eucalyptus grandis
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Eucgr.D00042
Eucalyptus grandis
Eucgr.D00042
I
0.814
Eucgr.D00044
Eucalyptus grandis
Eucgr.D00044
N
0.810
Eucgr.D00040
Eucalyptus grandis
Eucgr.D00040
I
0.807
Eucgr.L02563
Eucalyptus grandis
Eucgr.L02563
N
0.757
Eucgr.D00050
Eucalyptus grandis
Eucgr.D00050
N
0.731
Eucgr.D00037
Eucalyptus grandis
Eucgr.D00037
N
0.723
Gorai.011G021300
Gossypium raimondii
Gorai.011G021300
N
0.705
TCM_030020
Theobroma cacao
TCM_030020
I
0.699
MDP0000131822
Malus domestica
MDP0000131822
I
0.694
MDP0000289283
Malus domestica
MDP0000289283
I
0.686
SapurV1A.0417s0130
Salix purpurea
SapurV1A.0417s0130
I
0.686
Ciclev10017679m.g
Citrus clementina
Ciclev10017679m.g
I
0.686
evm.TU.supercontig_27.156
Carica papaya
evm.TU.supercontig_27.156
N
0.684
orange1.1g037956m.g
Citrus sinensis
orange1.1g037956m.g
N
0.679
SapurV1A.0028s0640
Salix purpurea
SapurV1A.0028s0640
N
0.678
Pm009880
Prunus mume
Pm009880
N
0.677
PRUPE_ppa015081mg
Prunus persica
PRUPE_ppa015081mg
N
0.677
Gorai.010G148300
Gossypium raimondii
Gorai.010G148300
N
0.677
POPTR_0011s04020
Populus trichocarpa
POPTR_0011s04020
N
0.671
cassava5261.m1
Manihot esculenta
cassava5261.m1
N
0.666
cassava5263.m1
Manihot esculenta
cassava5263.m1
N
0.665