Ciclev10017679m.g (Citrus clementina)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ciclev10017679m.g T286588_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AtMYB74
M07104_2.00
Arabidopsis thaliana
NYYYACCTAMYWHH

DDWRKTAGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB74_colamp_a
0.663 0.677
AtMYB74
M07105_2.00
Arabidopsis thaliana
BYHYACCTAMYHHH

DDDRKTAGGTRDRV
Dap-seq
OMalley et al.(2016)
MYB74_col
0.663 0.677
ATMYB13
M06999_2.00
Arabidopsis thaliana
HYCACCWACCHHHNH

DNDDDGGTWGGTGRD
Dap-seq
OMalley et al.(2016)
MYB13_col_a
0.662 0.720
ATMYB13
M07000_2.00
Arabidopsis thaliana
BYCACCWACCHHHNNHNN

NNDNNDDDGGTWGGTGRV
Dap-seq
OMalley et al.(2016)
MYB13_colamp_a
0.662 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10017679m Myb 14 61
Ciclev10017679m Myb 67 112

Links

Other Myb/SANT family TFs
Other Citrus clementina TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.890
TCM_030020 Theobroma cacao TCM_030020 I 0.798
Pm015302 Prunus mume Pm015302 N 0.790
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.790
MDP0000131822 Malus domestica MDP0000131822 I 0.779
Gorai.010G148300 Gossypium raimondii Gorai.010G148300 N 0.771
MDP0000289283 Malus domestica MDP0000289283 I 0.769
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.759
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.757
TCM_007865 Theobroma cacao TCM_007865 I 0.753
gene30736-v1.0-hybrid Fragaria vesca gene30736-v1.0-hybrid N 0.752
VIT_00s0203g00170 Vitis vinifera VIT_00s0203g00170 N 0.752
Eucgr.D00040 Eucalyptus grandis Eucgr.D00040 I 0.749
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I 0.749
MDP0000155426 Malus domestica MDP0000155426 I 0.747
MDP0000407613 Malus domestica MDP0000407613 N 0.744
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.744
Pm009880 Prunus mume Pm009880 N 0.743
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.742
Ciclev10018064m.g Citrus clementina Ciclev10018064m.g N 0.741
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.739
POPTR_0004s02570 Populus trichocarpa POPTR_0004s02570 I 0.737
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.733
PRUPE_ppa015081mg Prunus persica PRUPE_ppa015081mg N 0.732
Gorai.013G143000 Gossypium raimondii Gorai.013G143000 N 0.731
Gorai.013G143100 Gossypium raimondii Gorai.013G143100 N 0.731
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.730
29933.m001454 Ricinus communis 29933.m001454 N 0.730
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I 0.728
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I 0.728
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I 0.723
PGSC0003DMG402026177 Solanum tuberosum PGSC0003DMG402026177 I 0.723
Solyc07g053240.2 Solanum lycopersicum Solyc07g053240.2 I 0.722
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.722
PK24260.1 Cannabis sativa PK24260.1 N 0.722
Eucgr.D00044 Eucalyptus grandis Eucgr.D00044 N 0.722
GLYMA12G32530 Glycine max GLYMA12G32530 I 0.721
cassava5261.m1 Manihot esculenta cassava5261.m1 N 0.720
TCM_033016 Theobroma cacao TCM_033016 N 0.719
cassava5263.m1 Manihot esculenta cassava5263.m1 N 0.719
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.719
TCM_033015 Theobroma cacao TCM_033015 N 0.718
MTR_2g089420 Medicago truncatula MTR_2g089420 N 0.718
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.717
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.717
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.716
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.716
Eucgr.D00037 Eucalyptus grandis Eucgr.D00037 N 0.716
POPTR_0011s04020 Populus trichocarpa POPTR_0011s04020 N 0.715
Gorai.013G143200 Gossypium raimondii Gorai.013G143200 I 0.714
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I 0.712
SapurV1A.0028s0640 Salix purpurea SapurV1A.0028s0640 N 0.711
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.711
GLYMA06G45547 Glycine max GLYMA06G45547 N 0.710
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I 0.709
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.708
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.708
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.707
GLYMA12G11390 Glycine max GLYMA12G11390 N 0.707
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.706
Eucgr.L02563 Eucalyptus grandis Eucgr.L02563 N 0.706
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I 0.706
TCM_026197 Theobroma cacao TCM_026197 I 0.706
Lus10022021.g Linum usitatissimum Lus10022021.g I 0.705
Lus10031607.g Linum usitatissimum Lus10031607.g N 0.703
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.703
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.702
POPTR_0011s04010 Populus trichocarpa POPTR_0011s04010 N 0.702
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.702
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.699
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.699
GLYMA06G45540 Glycine max GLYMA06G45540 N 0.698
Eucgr.D00050 Eucalyptus grandis Eucgr.D00050 N 0.698
Solyc03g093940.1 Solanum lycopersicum Solyc03g093940.1 N 0.697
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.696
PGSC0003DMG400015087 Solanum tuberosum PGSC0003DMG400015087 N 0.695
Eucgr.D00751 Eucalyptus grandis Eucgr.D00751 I 0.694
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I 0.693
PK29337.1 Cannabis sativa PK29337.1 I 0.693
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.691
Pavir.Gb00650 Panicum virgatum Pavir.Gb00650 I 0.691
Si010814m.g Setaria italica Si010814m.g I 0.691
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.690
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I 0.689
cassava25784.m1 Manihot esculenta cassava25784.m1 I 0.689
MTR_2g089450 Medicago truncatula MTR_2g089450 N 0.688
PK20358.1 Cannabis sativa PK20358.1 I 0.688
Cla006077 Citrullus lanatus Cla006077 I 0.688
Cucsa.053600 Cucumis sativus Cucsa.053600 I 0.688
Eucgr.A01767 Eucalyptus grandis Eucgr.A01767 I 0.687
PGSC0003DMG400026176 Solanum tuberosum PGSC0003DMG400026176 N 0.687
Eucgr.I00828 Eucalyptus grandis Eucgr.I00828 N 0.686
cassava26894.m1 Manihot esculenta cassava26894.m1 N 0.685
ORUFI04G20280 Oryza rufipogon ORUFI04G20280 I 0.685
Gorai.013G072900 Gossypium raimondii Gorai.013G072900 I 0.685
Gorai.013G071600 Gossypium raimondii Gorai.013G071600 I 0.685
ORGLA04G0158700 Oryza glaberrima ORGLA04G0158700 I 0.685
Aquca_011_00538 Aquilegia coerulea Aquca_011_00538 I 0.685
Ca_22597 Cicer arietinum Ca_22597 N 0.684
PDK_20s1427521g001 Phoenix dactylifera PDK_20s1427521g001 I 0.683
GSMUA_Achr4G18180_001 Musa acuminata GSMUA_Achr4G18180_001 I 0.681
Solyc03g093930.2 Solanum lycopersicum Solyc03g093930.2 N 0.680
MTR_0008s0390 Medicago truncatula MTR_0008s0390 N 0.680
Sb06g027180 Sorghum bicolor Sb06g027180 I 0.680
PGSC0003DMG400042926 Solanum tuberosum PGSC0003DMG400042926 N 0.680
GLYMA12G11340 Glycine max GLYMA12G11340 N 0.679
Ciclev10021699m.g Citrus clementina Ciclev10021699m.g I 0.679
Ciclev10018311m.g Citrus clementina Ciclev10018311m.g I 0.679
Gorai.001G177100 Gossypium raimondii Gorai.001G177100 I 0.679
Ciclev10017435m.g Citrus clementina Ciclev10017435m.g I 0.679
evm.TU.supercontig_50.19 Carica papaya evm.TU.supercontig_50.19 I 0.679
Gorai.007G146200 Gossypium raimondii Gorai.007G146200 I 0.679
Solyc06g053610.2 Solanum lycopersicum Solyc06g053610.2 I 0.679
PGSC0003DMG400016292 Solanum tuberosum PGSC0003DMG400016292 I 0.679
TCM_004046 Theobroma cacao TCM_004046 I 0.679
Solyc07g055000.1 Solanum lycopersicum Solyc07g055000.1 N 0.679
Eucgr.K03262 Eucalyptus grandis Eucgr.K03262 I 0.678
MTR_0251s0050 Medicago truncatula MTR_0251s0050 N 0.678
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I 0.678
chr3.LjT47O18.40.nc Lotus japonicus chr3.LjT47O18.40.nc N 0.677
ORGLA04G0202400 Oryza glaberrima ORGLA04G0202400 I 0.677
OMERI04G19570 Oryza meridionalis OMERI04G19570 I 0.677
ONIVA04G19740 Oryza nivara ONIVA04G19740 I 0.677
ORUFI04G25410 Oryza rufipogon ORUFI04G25410 I 0.677
OPUNC04G21230 Oryza punctata OPUNC04G21230 I 0.677
chr3.LjT47O18.70.nc Lotus japonicus chr3.LjT47O18.70.nc N 0.677
OB04G30570 Oryza brachyantha OB04G30570 I 0.677
OS04G0594100 Oryza sativa OS04G0594100 I 0.677
OBART04G23680 Oryza barthii OBART04G23680 I 0.677
BGIOSGA014440 Oryza indica BGIOSGA014440 I 0.677
OGLUM04G23630 Oryza glumaepatula OGLUM04G23630 I 0.677
MDP0000145050 Malus domestica MDP0000145050 I 0.676
VIT_07s0005g03340 Vitis vinifera VIT_07s0005g03340 I 0.676
Si010384m.g Setaria italica Si010384m.g I 0.676
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.676
Ciclev10022057m.g Citrus clementina Ciclev10022057m.g I 0.676
Ciclev10005629m.g Citrus clementina Ciclev10005629m.g I 0.676
orange1.1g024484m.g Citrus sinensis orange1.1g024484m.g I 0.676
GLYMA10G32410 Glycine max GLYMA10G32410 I 0.676
gene01998-v1.0-hybrid Fragaria vesca gene01998-v1.0-hybrid N 0.674
GSMUA_Achr11G00410_001 Musa acuminata GSMUA_Achr11G00410_001 I 0.674
GSMUA_Achr6G31520_001 Musa acuminata GSMUA_Achr6G31520_001 I 0.674
GRMZM2G038722 Zea mays GRMZM2G038722 I 0.673
Ciclev10017677m.g Citrus clementina Ciclev10017677m.g I 0.673
BRADI5G20130 Brachypodium distachyon BRADI5G20130 I 0.672
TCM_020889 Theobroma cacao TCM_020889 I 0.672
Aquca_034_00364 Aquilegia coerulea Aquca_034_00364 I 0.672
TCM_007868 Theobroma cacao TCM_007868 I 0.671
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I 0.671
Thhalv10008531m.g Eutrema salsugineum Thhalv10008531m.g I 0.671
PK08038.1 Cannabis sativa PK08038.1 I 0.670
Lus10042561.g Linum usitatissimum Lus10042561.g I 0.670
orange1.1g048610m.g Citrus sinensis orange1.1g048610m.g N 0.670
evm.TU.supercontig_34.62 Carica papaya evm.TU.supercontig_34.62 N 0.669
SapurV1A.0483s0100 Salix purpurea SapurV1A.0483s0100 I 0.669
orange1.1g024492m.g Citrus sinensis orange1.1g024492m.g I 0.669
cassava47180.m1 Manihot esculenta cassava47180.m1 I 0.669
SapurV1A.1746s0010 Salix purpurea SapurV1A.1746s0010 I 0.669
PK03488.1 Cannabis sativa PK03488.1 I 0.669
LPERR02G23410 Leersia perrieri LPERR02G23410 I 0.669
OPUNC02G26430 Oryza punctata OPUNC02G26430 I 0.669
GLYMA03G31980 Glycine max GLYMA03G31980 I 0.669
ONIVA04G17140 Oryza nivara ONIVA04G17140 I 0.668
Bra003619 Brassica rapa Bra003619 I 0.667
Bo6g081140 Brassica oleracea Bo6g081140 I 0.667
SapurV1A.0048s0210 Salix purpurea SapurV1A.0048s0210 I 0.667
GLYMA07G30860 Glycine max GLYMA07G30860 I 0.667
Pm019588 Prunus mume Pm019588 I 0.666
PRUPE_ppa017039mg Prunus persica PRUPE_ppa017039mg I 0.666
Solyc10g005550.1 Solanum lycopersicum Solyc10g005550.1 I 0.666
OB02G35920 Oryza brachyantha OB02G35920 I 0.666
Cagra.7286s0009 Capsella grandiflora Cagra.7286s0009 I 0.666
Carubv10023905m.g Capsella rubella Carubv10023905m.g I 0.666
Sb04g031110 Sorghum bicolor Sb04g031110 I 0.665
Bo1g051220 Brassica oleracea Bo1g051220 I 0.664
Thhalv10027463m.g Eutrema salsugineum Thhalv10027463m.g I 0.664
Bra026281 Brassica rapa Bra026281 I 0.664
ATMYB63 Arabidopsis lyrata fgenesh2_kg.2__2216__AT1G79180.1 I 0.663
ATMYB63 Arabidopsis thaliana AT1G79180 D 0.663
orange1.1g018154m.g Citrus sinensis orange1.1g018154m.g I 0.663
orange1.1g035629m.g Citrus sinensis orange1.1g035629m.g I 0.663
AtMYB74 Arabidopsis thaliana AT4G05100 D 0.663
Pavir.J38204 Panicum virgatum Pavir.J38204 I 0.663
Thhalv10018933m.g Eutrema salsugineum Thhalv10018933m.g I 0.663
Ciclev10015729m.g Citrus clementina Ciclev10015729m.g I 0.663
Cla019747 Citrullus lanatus Cla019747 I 0.663
Cla001360 Citrullus lanatus Cla001360 I 0.663
29983.m003281 Ricinus communis 29983.m003281 I 0.663
Solyc07g054840.2 Solanum lycopersicum Solyc07g054840.2 I 0.663
cassava39892.m1 Manihot esculenta cassava39892.m1 I 0.663
AtMYB74 Arabidopsis lyrata Al_scaffold_0006_3584 I 0.663
VIT_00s0203g00070 Vitis vinifera VIT_00s0203g00070 I 0.663
TCM_030009 Theobroma cacao TCM_030009 I 0.663
Solyc10g008700.1 Solanum lycopersicum Solyc10g008700.1 I 0.663
Solyc02g079280.2 Solanum lycopersicum Solyc02g079280.2 I 0.663
Sb02g036250 Sorghum bicolor Sb02g036250 I 0.663
POPTR_0011s04120 Populus trichocarpa POPTR_0011s04120 I 0.663
Cucsa.045790 Cucumis sativus Cucsa.045790 I 0.663
cassava2558.valid.m1 Manihot esculenta cassava2558.valid.m1 I 0.663
Cucsa.126220 Cucumis sativus Cucsa.126220 I 0.663
PGSC0003DMG400026628 Solanum tuberosum PGSC0003DMG400026628 I 0.663
PGSC0003DMG400022399 Solanum tuberosum PGSC0003DMG400022399 I 0.663
Gorai.009G174500 Gossypium raimondii Gorai.009G174500 I 0.663
Gorai.010G149300 Gossypium raimondii Gorai.010G149300 I 0.663
Eucgr.A01772 Eucalyptus grandis Eucgr.A01772 I 0.663
Bostr.2983s0050 Boechera stricta Bostr.2983s0050 I 0.663
Bostr.20129s0353 Boechera stricta Bostr.20129s0353 I 0.663
PGSC0003DMG400018331 Solanum tuberosum PGSC0003DMG400018331 I 0.663
Ciclev10017668m.g Citrus clementina Ciclev10017668m.g I 0.663
GSMUA_Achr4G28850_001 Musa acuminata GSMUA_Achr4G28850_001 I 0.663
ATMYB13 Arabidopsis lyrata fgenesh2_kg.1__590__AT1G06180.1 I 0.662
Si017704m.g Setaria italica Si017704m.g I 0.662
POPTR_0005s24550 Populus trichocarpa POPTR_0005s24550 I 0.662
Gorai.011G173900 Gossypium raimondii Gorai.011G173900 I 0.662
ATMYB13 Arabidopsis thaliana AT1G06180 D 0.662
Pavir.Aa01159 Panicum virgatum Pavir.Aa01159 I 0.662
Solyc03g005570.2 Solanum lycopersicum Solyc03g005570.2 I 0.661
Sb06g022660 Sorghum bicolor Sb06g022660 I 0.661
OB04G25860 Oryza brachyantha OB04G25860 I 0.661
F775_18231 Aegilops tauschii F775_18231 I 0.661
GRMZM2G048295 Zea mays GRMZM2G048295 I 0.661
gene08084-v1.0-hybrid Fragaria vesca gene08084-v1.0-hybrid I 0.661
TRIUR3_18702 Triticum urartu TRIUR3_18702 I 0.661
Traes_2DL_D39684C41 Triticum aestivum Traes_2DL_D39684C41 I 0.661
Traes_2BL_34A0848F2 Triticum aestivum Traes_2BL_34A0848F2 I 0.661
Traes_2BL_FD8C2F815 Triticum aestivum Traes_2BL_FD8C2F815 I 0.661
Traes_2DL_54E6F0446 Triticum aestivum Traes_2DL_54E6F0446 I 0.661
Traes_2AL_CC403D182 Triticum aestivum Traes_2AL_CC403D182 I 0.661