CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10017679m.g
(
Citrus clementina
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Ciclev10017679m.g
T286588_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AtMYB74
M07104_2.00
Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB74_colamp_a
0.663
0.677
AtMYB74
M07105_2.00
Arabidopsis thaliana
BYHYACCTAMYHHH
DDDRKTAGGTRDRV
Dap-seq
OMalley et al.(2016)
MYB74_col
0.663
0.677
ATMYB13
M06999_2.00
Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD
Dap-seq
OMalley et al.(2016)
MYB13_col_a
0.662
0.720
ATMYB13
M07000_2.00
Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV
Dap-seq
OMalley et al.(2016)
MYB13_colamp_a
0.662
0.720
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10017679m
Myb
14
61
KGSWAPEEDRKLIAYIRRYGIWNWSEMPKYAGLLRCGKSCRLRWMNYL
Ciclev10017679m
Myb
67
112
RGNFTQEEDETIIKLHQQLGNRWSAIASRLPRRTDNEIKNHWHTRL
Links
Other
Myb/SANT
family TFs
Other
Citrus clementina
TFs
228 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g037956m.g
Citrus sinensis
orange1.1g037956m.g
N
0.890
TCM_030020
Theobroma cacao
TCM_030020
I
0.798
Pm015302
Prunus mume
Pm015302
N
0.790
PRUPE_ppa026553mg
Prunus persica
PRUPE_ppa026553mg
N
0.790
MDP0000131822
Malus domestica
MDP0000131822
I
0.779
Gorai.010G148300
Gossypium raimondii
Gorai.010G148300
N
0.771
MDP0000289283
Malus domestica
MDP0000289283
I
0.769
evm.TU.supercontig_27.156
Carica papaya
evm.TU.supercontig_27.156
N
0.759
Gorai.011G021300
Gossypium raimondii
Gorai.011G021300
N
0.757
TCM_007865
Theobroma cacao
TCM_007865
I
0.753
gene30736-v1.0-hybrid
Fragaria vesca
gene30736-v1.0-hybrid
N
0.752
VIT_00s0203g00170
Vitis vinifera
VIT_00s0203g00170
N
0.752
Eucgr.D00040
Eucalyptus grandis
Eucgr.D00040
I
0.749
Eucgr.D00042
Eucalyptus grandis
Eucgr.D00042
I
0.749
MDP0000155426
Malus domestica
MDP0000155426
I
0.747
MDP0000407613
Malus domestica
MDP0000407613
N
0.744
VIT_12s0134g00480
Vitis vinifera
VIT_12s0134g00480
I
0.744
Pm009880
Prunus mume
Pm009880
N
0.743
Gorai.012G132400
Gossypium raimondii
Gorai.012G132400
I
0.742
Ciclev10018064m.g
Citrus clementina
Ciclev10018064m.g
N
0.741
GLYMA06G45554
Glycine max
GLYMA06G45554
I
0.739
POPTR_0004s02570
Populus trichocarpa
POPTR_0004s02570
I
0.737
POPTR_0013s14560
Populus trichocarpa
POPTR_0013s14560
I
0.733
PRUPE_ppa015081mg
Prunus persica
PRUPE_ppa015081mg
N
0.732
Gorai.013G143000
Gossypium raimondii
Gorai.013G143000
N
0.731
Gorai.013G143100
Gossypium raimondii
Gorai.013G143100
N
0.731
SapurV1A.0048s0160
Salix purpurea
SapurV1A.0048s0160
N
0.730
29933.m001454
Ricinus communis
29933.m001454
N
0.730
PGSC0003DMG401026177
Solanum tuberosum
PGSC0003DMG401026177
I
0.728
Solyc07g053230.2
Solanum lycopersicum
Solyc07g053230.2
I
0.728
Solyc07g054980.1
Solanum lycopersicum
Solyc07g054980.1
I
0.723
PGSC0003DMG402026177
Solanum tuberosum
PGSC0003DMG402026177
I
0.723
Solyc07g053240.2
Solanum lycopersicum
Solyc07g053240.2
I
0.722
GLYMA12G11330
Glycine max
GLYMA12G11330
I
0.722
PK24260.1
Cannabis sativa
PK24260.1
N
0.722
Eucgr.D00044
Eucalyptus grandis
Eucgr.D00044
N
0.722
GLYMA12G32530
Glycine max
GLYMA12G32530
I
0.721
cassava5261.m1
Manihot esculenta
cassava5261.m1
N
0.720
TCM_033016
Theobroma cacao
TCM_033016
N
0.719
cassava5263.m1
Manihot esculenta
cassava5263.m1
N
0.719
Gorai.005G206800
Gossypium raimondii
Gorai.005G206800
N
0.719
TCM_033015
Theobroma cacao
TCM_033015
N
0.718
MTR_2g089420
Medicago truncatula
MTR_2g089420
N
0.718
Lus10039734.g
Linum usitatissimum
Lus10039734.g
I
0.717
orange1.1g024860m.g
Citrus sinensis
orange1.1g024860m.g
I
0.717
Lus10039735.g
Linum usitatissimum
Lus10039735.g
I
0.716
Gorai.002G016800
Gossypium raimondii
Gorai.002G016800
I
0.716
Eucgr.D00037
Eucalyptus grandis
Eucgr.D00037
N
0.716
POPTR_0011s04020
Populus trichocarpa
POPTR_0011s04020
N
0.715
Gorai.013G143200
Gossypium raimondii
Gorai.013G143200
I
0.714
GSMUA_Achr5G14600_001
Musa acuminata
GSMUA_Achr5G14600_001
I
0.712
SapurV1A.0028s0640
Salix purpurea
SapurV1A.0028s0640
N
0.711
Eucgr.A01766
Eucalyptus grandis
Eucgr.A01766
I
0.711
GLYMA06G45547
Glycine max
GLYMA06G45547
N
0.710
cassava6764.valid.m1
Manihot esculenta
cassava6764.valid.m1
I
0.709
Eucgr.H00158
Eucalyptus grandis
Eucgr.H00158
I
0.708
POPTR_0019s14140
Populus trichocarpa
POPTR_0019s14140
N
0.708
VIT_12s0134g00490
Vitis vinifera
VIT_12s0134g00490
I
0.707
GLYMA12G11390
Glycine max
GLYMA12G11390
N
0.707
Lus10033738.g
Linum usitatissimum
Lus10033738.g
N
0.706
Eucgr.L02563
Eucalyptus grandis
Eucgr.L02563
N
0.706
GSMUA_Achr4G21910_001
Musa acuminata
GSMUA_Achr4G21910_001
I
0.706
TCM_026197
Theobroma cacao
TCM_026197
I
0.706
Lus10022021.g
Linum usitatissimum
Lus10022021.g
I
0.705
Lus10031607.g
Linum usitatissimum
Lus10031607.g
N
0.703
GLYMA13G37903
Glycine max
GLYMA13G37903
I
0.703
AMTR_s00032p00057800
Amborella trichopoda
AMTR_s00032p00057800
I
0.702
POPTR_0011s04010
Populus trichocarpa
POPTR_0011s04010
N
0.702
GLYMA12G32541
Glycine max
GLYMA12G32541
N
0.702
Eucgr.H03057
Eucalyptus grandis
Eucgr.H03057
I
0.699
PDK_20s1320951g001
Phoenix dactylifera
PDK_20s1320951g001
I
0.699
GLYMA06G45540
Glycine max
GLYMA06G45540
N
0.698
Eucgr.D00050
Eucalyptus grandis
Eucgr.D00050
N
0.698
Solyc03g093940.1
Solanum lycopersicum
Solyc03g093940.1
N
0.697
GSMUA_Achr5G03920_001
Musa acuminata
GSMUA_Achr5G03920_001
I
0.696
PGSC0003DMG400015087
Solanum tuberosum
PGSC0003DMG400015087
N
0.695
Eucgr.D00751
Eucalyptus grandis
Eucgr.D00751
I
0.694
Ciclev10016303m.g
Citrus clementina
Ciclev10016303m.g
I
0.693
PK29337.1
Cannabis sativa
PK29337.1
I
0.693
SapurV1A.0417s0130
Salix purpurea
SapurV1A.0417s0130
I
0.691
Pavir.Gb00650
Panicum virgatum
Pavir.Gb00650
I
0.691
Si010814m.g
Setaria italica
Si010814m.g
I
0.691
Bostr.24513s0107
Boechera stricta
Bostr.24513s0107
I
0.690
orange1.1g042846m.g
Citrus sinensis
orange1.1g042846m.g
I
0.689
cassava25784.m1
Manihot esculenta
cassava25784.m1
I
0.689
MTR_2g089450
Medicago truncatula
MTR_2g089450
N
0.688
PK20358.1
Cannabis sativa
PK20358.1
I
0.688
Cla006077
Citrullus lanatus
Cla006077
I
0.688
Cucsa.053600
Cucumis sativus
Cucsa.053600
I
0.688
Eucgr.A01767
Eucalyptus grandis
Eucgr.A01767
I
0.687
PGSC0003DMG400026176
Solanum tuberosum
PGSC0003DMG400026176
N
0.687
Eucgr.I00828
Eucalyptus grandis
Eucgr.I00828
N
0.686
cassava26894.m1
Manihot esculenta
cassava26894.m1
N
0.685
ORUFI04G20280
Oryza rufipogon
ORUFI04G20280
I
0.685
Gorai.013G072900
Gossypium raimondii
Gorai.013G072900
I
0.685
Gorai.013G071600
Gossypium raimondii
Gorai.013G071600
I
0.685
ORGLA04G0158700
Oryza glaberrima
ORGLA04G0158700
I
0.685
Aquca_011_00538
Aquilegia coerulea
Aquca_011_00538
I
0.685
Ca_22597
Cicer arietinum
Ca_22597
N
0.684
PDK_20s1427521g001
Phoenix dactylifera
PDK_20s1427521g001
I
0.683
GSMUA_Achr4G18180_001
Musa acuminata
GSMUA_Achr4G18180_001
I
0.681
Solyc03g093930.2
Solanum lycopersicum
Solyc03g093930.2
N
0.680
MTR_0008s0390
Medicago truncatula
MTR_0008s0390
N
0.680
Sb06g027180
Sorghum bicolor
Sb06g027180
I
0.680
PGSC0003DMG400042926
Solanum tuberosum
PGSC0003DMG400042926
N
0.680
GLYMA12G11340
Glycine max
GLYMA12G11340
N
0.679
Ciclev10021699m.g
Citrus clementina
Ciclev10021699m.g
I
0.679
Ciclev10018311m.g
Citrus clementina
Ciclev10018311m.g
I
0.679
Gorai.001G177100
Gossypium raimondii
Gorai.001G177100
I
0.679
Ciclev10017435m.g
Citrus clementina
Ciclev10017435m.g
I
0.679
evm.TU.supercontig_50.19
Carica papaya
evm.TU.supercontig_50.19
I
0.679
Gorai.007G146200
Gossypium raimondii
Gorai.007G146200
I
0.679
Solyc06g053610.2
Solanum lycopersicum
Solyc06g053610.2
I
0.679
PGSC0003DMG400016292
Solanum tuberosum
PGSC0003DMG400016292
I
0.679
TCM_004046
Theobroma cacao
TCM_004046
I
0.679
Solyc07g055000.1
Solanum lycopersicum
Solyc07g055000.1
N
0.679
Eucgr.K03262
Eucalyptus grandis
Eucgr.K03262
I
0.678
MTR_0251s0050
Medicago truncatula
MTR_0251s0050
N
0.678
Gorai.008G151100
Gossypium raimondii
Gorai.008G151100
I
0.678
chr3.LjT47O18.40.nc
Lotus japonicus
chr3.LjT47O18.40.nc
N
0.677
ORGLA04G0202400
Oryza glaberrima
ORGLA04G0202400
I
0.677
OMERI04G19570
Oryza meridionalis
OMERI04G19570
I
0.677
ONIVA04G19740
Oryza nivara
ONIVA04G19740
I
0.677
ORUFI04G25410
Oryza rufipogon
ORUFI04G25410
I
0.677
OPUNC04G21230
Oryza punctata
OPUNC04G21230
I
0.677
chr3.LjT47O18.70.nc
Lotus japonicus
chr3.LjT47O18.70.nc
N
0.677
OB04G30570
Oryza brachyantha
OB04G30570
I
0.677
OS04G0594100
Oryza sativa
OS04G0594100
I
0.677
OBART04G23680
Oryza barthii
OBART04G23680
I
0.677
BGIOSGA014440
Oryza indica
BGIOSGA014440
I
0.677
OGLUM04G23630
Oryza glumaepatula
OGLUM04G23630
I
0.677
MDP0000145050
Malus domestica
MDP0000145050
I
0.676
VIT_07s0005g03340
Vitis vinifera
VIT_07s0005g03340
I
0.676
Si010384m.g
Setaria italica
Si010384m.g
I
0.676
evm.TU.supercontig_44.60
Carica papaya
evm.TU.supercontig_44.60
I
0.676
Ciclev10022057m.g
Citrus clementina
Ciclev10022057m.g
I
0.676
Ciclev10005629m.g
Citrus clementina
Ciclev10005629m.g
I
0.676
orange1.1g024484m.g
Citrus sinensis
orange1.1g024484m.g
I
0.676
GLYMA10G32410
Glycine max
GLYMA10G32410
I
0.676
gene01998-v1.0-hybrid
Fragaria vesca
gene01998-v1.0-hybrid
N
0.674
GSMUA_Achr11G00410_001
Musa acuminata
GSMUA_Achr11G00410_001
I
0.674
GSMUA_Achr6G31520_001
Musa acuminata
GSMUA_Achr6G31520_001
I
0.674
GRMZM2G038722
Zea mays
GRMZM2G038722
I
0.673
Ciclev10017677m.g
Citrus clementina
Ciclev10017677m.g
I
0.673
BRADI5G20130
Brachypodium distachyon
BRADI5G20130
I
0.672
TCM_020889
Theobroma cacao
TCM_020889
I
0.672
Aquca_034_00364
Aquilegia coerulea
Aquca_034_00364
I
0.672
TCM_007868
Theobroma cacao
TCM_007868
I
0.671
GSMUA_Achr11G22820_001
Musa acuminata
GSMUA_Achr11G22820_001
I
0.671
Thhalv10008531m.g
Eutrema salsugineum
Thhalv10008531m.g
I
0.671
PK08038.1
Cannabis sativa
PK08038.1
I
0.670
Lus10042561.g
Linum usitatissimum
Lus10042561.g
I
0.670
orange1.1g048610m.g
Citrus sinensis
orange1.1g048610m.g
N
0.670
evm.TU.supercontig_34.62
Carica papaya
evm.TU.supercontig_34.62
N
0.669
SapurV1A.0483s0100
Salix purpurea
SapurV1A.0483s0100
I
0.669
orange1.1g024492m.g
Citrus sinensis
orange1.1g024492m.g
I
0.669
cassava47180.m1
Manihot esculenta
cassava47180.m1
I
0.669
SapurV1A.1746s0010
Salix purpurea
SapurV1A.1746s0010
I
0.669
PK03488.1
Cannabis sativa
PK03488.1
I
0.669
LPERR02G23410
Leersia perrieri
LPERR02G23410
I
0.669
OPUNC02G26430
Oryza punctata
OPUNC02G26430
I
0.669
GLYMA03G31980
Glycine max
GLYMA03G31980
I
0.669
ONIVA04G17140
Oryza nivara
ONIVA04G17140
I
0.668
Bra003619
Brassica rapa
Bra003619
I
0.667
Bo6g081140
Brassica oleracea
Bo6g081140
I
0.667
SapurV1A.0048s0210
Salix purpurea
SapurV1A.0048s0210
I
0.667
GLYMA07G30860
Glycine max
GLYMA07G30860
I
0.667
Pm019588
Prunus mume
Pm019588
I
0.666
PRUPE_ppa017039mg
Prunus persica
PRUPE_ppa017039mg
I
0.666
Solyc10g005550.1
Solanum lycopersicum
Solyc10g005550.1
I
0.666
OB02G35920
Oryza brachyantha
OB02G35920
I
0.666
Cagra.7286s0009
Capsella grandiflora
Cagra.7286s0009
I
0.666
Carubv10023905m.g
Capsella rubella
Carubv10023905m.g
I
0.666
Sb04g031110
Sorghum bicolor
Sb04g031110
I
0.665
Bo1g051220
Brassica oleracea
Bo1g051220
I
0.664
Thhalv10027463m.g
Eutrema salsugineum
Thhalv10027463m.g
I
0.664
Bra026281
Brassica rapa
Bra026281
I
0.664
ATMYB63
Arabidopsis lyrata
fgenesh2_kg.2__2216__AT1G79180.1
I
0.663
ATMYB63
Arabidopsis thaliana
AT1G79180
D
0.663
orange1.1g018154m.g
Citrus sinensis
orange1.1g018154m.g
I
0.663
orange1.1g035629m.g
Citrus sinensis
orange1.1g035629m.g
I
0.663
AtMYB74
Arabidopsis thaliana
AT4G05100
D
0.663
Pavir.J38204
Panicum virgatum
Pavir.J38204
I
0.663
Thhalv10018933m.g
Eutrema salsugineum
Thhalv10018933m.g
I
0.663
Ciclev10015729m.g
Citrus clementina
Ciclev10015729m.g
I
0.663
Cla019747
Citrullus lanatus
Cla019747
I
0.663
Cla001360
Citrullus lanatus
Cla001360
I
0.663
29983.m003281
Ricinus communis
29983.m003281
I
0.663
Solyc07g054840.2
Solanum lycopersicum
Solyc07g054840.2
I
0.663
cassava39892.m1
Manihot esculenta
cassava39892.m1
I
0.663
AtMYB74
Arabidopsis lyrata
Al_scaffold_0006_3584
I
0.663
VIT_00s0203g00070
Vitis vinifera
VIT_00s0203g00070
I
0.663
TCM_030009
Theobroma cacao
TCM_030009
I
0.663
Solyc10g008700.1
Solanum lycopersicum
Solyc10g008700.1
I
0.663
Solyc02g079280.2
Solanum lycopersicum
Solyc02g079280.2
I
0.663
Sb02g036250
Sorghum bicolor
Sb02g036250
I
0.663
POPTR_0011s04120
Populus trichocarpa
POPTR_0011s04120
I
0.663
Cucsa.045790
Cucumis sativus
Cucsa.045790
I
0.663
cassava2558.valid.m1
Manihot esculenta
cassava2558.valid.m1
I
0.663
Cucsa.126220
Cucumis sativus
Cucsa.126220
I
0.663
PGSC0003DMG400026628
Solanum tuberosum
PGSC0003DMG400026628
I
0.663
PGSC0003DMG400022399
Solanum tuberosum
PGSC0003DMG400022399
I
0.663
Gorai.009G174500
Gossypium raimondii
Gorai.009G174500
I
0.663
Gorai.010G149300
Gossypium raimondii
Gorai.010G149300
I
0.663
Eucgr.A01772
Eucalyptus grandis
Eucgr.A01772
I
0.663
Bostr.2983s0050
Boechera stricta
Bostr.2983s0050
I
0.663
Bostr.20129s0353
Boechera stricta
Bostr.20129s0353
I
0.663
PGSC0003DMG400018331
Solanum tuberosum
PGSC0003DMG400018331
I
0.663
Ciclev10017668m.g
Citrus clementina
Ciclev10017668m.g
I
0.663
GSMUA_Achr4G28850_001
Musa acuminata
GSMUA_Achr4G28850_001
I
0.663
ATMYB13
Arabidopsis lyrata
fgenesh2_kg.1__590__AT1G06180.1
I
0.662
Si017704m.g
Setaria italica
Si017704m.g
I
0.662
POPTR_0005s24550
Populus trichocarpa
POPTR_0005s24550
I
0.662
Gorai.011G173900
Gossypium raimondii
Gorai.011G173900
I
0.662
ATMYB13
Arabidopsis thaliana
AT1G06180
D
0.662
Pavir.Aa01159
Panicum virgatum
Pavir.Aa01159
I
0.662
Solyc03g005570.2
Solanum lycopersicum
Solyc03g005570.2
I
0.661
Sb06g022660
Sorghum bicolor
Sb06g022660
I
0.661
OB04G25860
Oryza brachyantha
OB04G25860
I
0.661
F775_18231
Aegilops tauschii
F775_18231
I
0.661
GRMZM2G048295
Zea mays
GRMZM2G048295
I
0.661
gene08084-v1.0-hybrid
Fragaria vesca
gene08084-v1.0-hybrid
I
0.661
TRIUR3_18702
Triticum urartu
TRIUR3_18702
I
0.661
Traes_2DL_D39684C41
Triticum aestivum
Traes_2DL_D39684C41
I
0.661
Traes_2BL_34A0848F2
Triticum aestivum
Traes_2BL_34A0848F2
I
0.661
Traes_2BL_FD8C2F815
Triticum aestivum
Traes_2BL_FD8C2F815
I
0.661
Traes_2DL_54E6F0446
Triticum aestivum
Traes_2DL_54E6F0446
I
0.661
Traes_2AL_CC403D182
Triticum aestivum
Traes_2AL_CC403D182
I
0.661