gene30736-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene30736-v1.0-hybrid T287412_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna30736.1-v1.0-hybrid Myb 16 63
mrna30736.1-v1.0-hybrid Myb 69 114

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000131822 Malus domestica MDP0000131822 I 0.809
TCM_030020 Theobroma cacao TCM_030020 I 0.804
MDP0000289283 Malus domestica MDP0000289283 I 0.804
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.787
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.780
Pm009880 Prunus mume Pm009880 N 0.776
PRUPE_ppa015081mg Prunus persica PRUPE_ppa015081mg N 0.766
Gorai.010G148300 Gossypium raimondii Gorai.010G148300 N 0.760
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.752
VIT_00s0203g00170 Vitis vinifera VIT_00s0203g00170 N 0.747
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.745
cassava5261.m1 Manihot esculenta cassava5261.m1 N 0.736
MDP0000155426 Malus domestica MDP0000155426 I 0.730
Gorai.013G143000 Gossypium raimondii Gorai.013G143000 N 0.728
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.728
MDP0000407613 Malus domestica MDP0000407613 N 0.727
Gorai.013G143100 Gossypium raimondii Gorai.013G143100 N 0.727
Eucgr.D00040 Eucalyptus grandis Eucgr.D00040 I 0.724
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I 0.724
29933.m001454 Ricinus communis 29933.m001454 N 0.723
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.718
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.716
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.715
Eucgr.D00037 Eucalyptus grandis Eucgr.D00037 N 0.713
Eucgr.D00044 Eucalyptus grandis Eucgr.D00044 N 0.711
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.709
TCM_033016 Theobroma cacao TCM_033016 N 0.708
TCM_007865 Theobroma cacao TCM_007865 I 0.706
TCM_033015 Theobroma cacao TCM_033015 N 0.706
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.706
cassava5263.m1 Manihot esculenta cassava5263.m1 N 0.704
POPTR_0004s02570 Populus trichocarpa POPTR_0004s02570 I 0.703
Gorai.013G143200 Gossypium raimondii Gorai.013G143200 I 0.702
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I 0.701
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.700
Lus10022021.g Linum usitatissimum Lus10022021.g I 0.699
POPTR_0011s04010 Populus trichocarpa POPTR_0011s04010 N 0.699
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.698
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.697
Aquca_034_00364 Aquilegia coerulea Aquca_034_00364 I 0.696
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.696
Pm015302 Prunus mume Pm015302 N 0.696
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.696
MTR_2g089450 Medicago truncatula MTR_2g089450 N 0.695
POPTR_0011s04020 Populus trichocarpa POPTR_0011s04020 N 0.693
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.693
Eucgr.D00050 Eucalyptus grandis Eucgr.D00050 N 0.692
cassava25784.m1 Manihot esculenta cassava25784.m1 I 0.691
GLYMA12G32530 Glycine max GLYMA12G32530 I 0.691
Eucgr.L02563 Eucalyptus grandis Eucgr.L02563 N 0.691
gene01998-v1.0-hybrid Fragaria vesca gene01998-v1.0-hybrid N 0.688
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.687
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.687
GLYMA06G45547 Glycine max GLYMA06G45547 N 0.686
GLYMA19G34740 Glycine max GLYMA19G34740 I 0.685
TCM_026197 Theobroma cacao TCM_026197 I 0.684
PK24260.1 Cannabis sativa PK24260.1 N 0.684
SapurV1A.0028s0640 Salix purpurea SapurV1A.0028s0640 N 0.682
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.682
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I 0.680
VIT_07s0005g03340 Vitis vinifera VIT_07s0005g03340 I 0.680
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.680
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.680
Ca_12130 Cicer arietinum Ca_12130 I 0.679
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.678
GLYMA12G11390 Glycine max GLYMA12G11390 N 0.678
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.678
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.677
Eucgr.D00751 Eucalyptus grandis Eucgr.D00751 I 0.677
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.677
Cla006077 Citrullus lanatus Cla006077 I 0.677
Lus10003557.g Linum usitatissimum Lus10003557.g I 0.677
Gorai.007G146200 Gossypium raimondii Gorai.007G146200 I 0.676
Gorai.001G177100 Gossypium raimondii Gorai.001G177100 I 0.676
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.676
TCM_004046 Theobroma cacao TCM_004046 I 0.676
evm.TU.supercontig_50.19 Carica papaya evm.TU.supercontig_50.19 I 0.676
Ciclev10021699m.g Citrus clementina Ciclev10021699m.g I 0.676
cassava47180.m1 Manihot esculenta cassava47180.m1 I 0.674
Cla021845 Citrullus lanatus Cla021845 I 0.674
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.673
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.673
GLYMA10G32410 Glycine max GLYMA10G32410 I 0.673
gene08084-v1.0-hybrid Fragaria vesca gene08084-v1.0-hybrid I 0.673
Lus10018546.g Linum usitatissimum Lus10018546.g N 0.673
Lus10031607.g Linum usitatissimum Lus10031607.g N 0.672
PDK_20s1427521g001 Phoenix dactylifera PDK_20s1427521g001 I 0.671
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I 0.671
ORGLA04G0158700 Oryza glaberrima ORGLA04G0158700 I 0.671
ORUFI04G20280 Oryza rufipogon ORUFI04G20280 I 0.671
VIT_05s0049g01020 Vitis vinifera VIT_05s0049g01020 I 0.670
GLYMA06G45540 Glycine max GLYMA06G45540 N 0.669
MTR_2g089420 Medicago truncatula MTR_2g089420 N 0.669
Cagra.7286s0009 Capsella grandiflora Cagra.7286s0009 I 0.669
Carubv10023905m.g Capsella rubella Carubv10023905m.g I 0.669
Cucsa.053600 Cucumis sativus Cucsa.053600 I 0.668
PK20358.1 Cannabis sativa PK20358.1 I 0.668
Lus10042561.g Linum usitatissimum Lus10042561.g I 0.668
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.667
GLYMA03G31980 Glycine max GLYMA03G31980 I 0.665
orange1.1g024492m.g Citrus sinensis orange1.1g024492m.g I 0.665
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.665
Eucgr.K03262 Eucalyptus grandis Eucgr.K03262 I 0.665
Lus10021185.g Linum usitatissimum Lus10021185.g I 0.665
PK08038.1 Cannabis sativa PK08038.1 I 0.664
Pm020596 Prunus mume Pm020596 I 0.664
PRUPE_ppa021921mg Prunus persica PRUPE_ppa021921mg I 0.664
chr3.LjT47O18.40.nc Lotus japonicus chr3.LjT47O18.40.nc N 0.663
OB04G25860 Oryza brachyantha OB04G25860 I 0.663
Ciclev10022057m.g Citrus clementina Ciclev10022057m.g I 0.663
cassava37350.valid.m1 Manihot esculenta cassava37350.valid.m1 I 0.662
GSMUA_Achr4G18180_001 Musa acuminata GSMUA_Achr4G18180_001 I 0.661