cassava6764.valid.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava6764.valid.m1 T284332_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB15
M07084_2.00 		Arabidopsis thaliana
NNNHNNHHNHHYCACCWAMYH
DRKTWGGTGRDDNDDNNDNNN		 Dap-seq
OMalley et al.(2016)
ATY19_col_a 		0.673 0.710
MYB15
M02699_2.00 		Arabidopsis thaliana
CCACCTACCSBBG
CVVSGGTAGGTGG		 SELEX
Mathelier et al.(2014)
MA0574.1 		0.673 0.710
MYB15
M11041_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB15_01 		0.673 0.710
MYB15
M11042_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB15_Q2 		0.673 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava6764.valid.m1 Myb 14 61
cassava6764.valid.m1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10017677m.g Citrus clementina Ciclev10017677m.g I 0.786
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I 0.779
Ciclev10018311m.g Citrus clementina Ciclev10018311m.g I 0.769
Ciclev10017435m.g Citrus clementina Ciclev10017435m.g I 0.769
TCM_007868 Theobroma cacao TCM_007868 I 0.766
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.760
gene01997-v1.0-hybrid Fragaria vesca gene01997-v1.0-hybrid I 0.752
Lus10018518.g Linum usitatissimum Lus10018518.g N 0.750
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.750
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I 0.748
PK29337.1 Cannabis sativa PK29337.1 I 0.742
cassava26895.m1 Manihot esculenta cassava26895.m1 N 0.742
mgf022158m Mimulus guttatus mgf022158m N 0.738
mgf019234m Mimulus guttatus mgf019234m N 0.737
cassava14699.m1 Manihot esculenta cassava14699.m1 I 0.733
Si010814m.g Setaria italica Si010814m.g I 0.733
Gorai.013G071600 Gossypium raimondii Gorai.013G071600 I 0.730
Gorai.013G072900 Gossypium raimondii Gorai.013G072900 I 0.730
mgf022141m Mimulus guttatus mgf022141m N 0.729
Pavir.Gb00650 Panicum virgatum Pavir.Gb00650 I 0.729
OS10G0478300 Oryza sativa OS10G0478300 I 0.728
BGIOSGA031688 Oryza indica BGIOSGA031688 I 0.728
ORUFI10G14060 Oryza rufipogon ORUFI10G14060 I 0.728
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I 0.725
OB0039G10010 Oryza brachyantha OB0039G10010 I 0.724
TRIUR3_31731 Triticum urartu TRIUR3_31731 I 0.723
mgf018684m Mimulus guttatus mgf018684m N 0.722
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.720
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.719
Pm015302 Prunus mume Pm015302 N 0.719
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.719
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.717
GSMUA_Achr11G00410_001 Musa acuminata GSMUA_Achr11G00410_001 I 0.715
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.715
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.713
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I 0.712
POPTR_0019s14120 Populus trichocarpa POPTR_0019s14120 I 0.712
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I 0.712
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.711
SapurV1A.0555s0160 Salix purpurea SapurV1A.0555s0160 I 0.710
POPTR_0001s02240 Populus trichocarpa POPTR_0001s02240 I 0.710
MDP0000155426 Malus domestica MDP0000155426 I 0.710
Pm015303 Prunus mume Pm015303 I 0.710
GLYMA06G45531 Glycine max GLYMA06G45531 N 0.710
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.709
SapurV1A.0417s0150 Salix purpurea SapurV1A.0417s0150 I 0.709
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.709
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I 0.709
PGSC0003DMG402026177 Solanum tuberosum PGSC0003DMG402026177 I 0.707
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.707
SapurV1A.2051s0040 Salix purpurea SapurV1A.2051s0040 I 0.706
POPTR_0003s09300 Populus trichocarpa POPTR_0003s09300 I 0.706
SapurV1A.0048s0170 Salix purpurea SapurV1A.0048s0170 I 0.706
PRUPE_ppa025095mg Prunus persica PRUPE_ppa025095mg I 0.706
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I 0.705
Eucgr.D00050 Eucalyptus grandis Eucgr.D00050 N 0.704
GRMZM2G048295 Zea mays GRMZM2G048295 I 0.703
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.703
Aquca_030_00245 Aquilegia coerulea Aquca_030_00245 N 0.703
ORUFI04G20280 Oryza rufipogon ORUFI04G20280 I 0.703
Sb06g022660 Sorghum bicolor Sb06g022660 I 0.703
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.703
ORGLA04G0158700 Oryza glaberrima ORGLA04G0158700 I 0.703
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.702
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I 0.702
Solyc07g053240.2 Solanum lycopersicum Solyc07g053240.2 I 0.702
TCM_007865 Theobroma cacao TCM_007865 I 0.701
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.700
POPTR_0019s14130 Populus trichocarpa POPTR_0019s14130 N 0.699
GLYMA06G45520 Glycine max GLYMA06G45520 N 0.699
GLYMA03G41100 Glycine max GLYMA03G41100 I 0.698
GLYMA12G32530 Glycine max GLYMA12G32530 I 0.697
GSMUA_Achr5G18600_001 Musa acuminata GSMUA_Achr5G18600_001 I 0.696
GLYMA12G11490 Glycine max GLYMA12G11490 N 0.696
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.696
PK24260.1 Cannabis sativa PK24260.1 N 0.695
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.694
GSMUA_Achr4G28850_001 Musa acuminata GSMUA_Achr4G28850_001 I 0.694
MDP0000145050 Malus domestica MDP0000145050 I 0.694
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.694
AC206901.3_FG005 Zea mays AC206901.3_FG005 I 0.692
Pm009880 Prunus mume Pm009880 N 0.692
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.692
PRUPE_ppa015081mg Prunus persica PRUPE_ppa015081mg N 0.692
Gorai.004G183600 Gossypium raimondii Gorai.004G183600 I 0.692
Solyc06g053610.2 Solanum lycopersicum Solyc06g053610.2 I 0.691
MTR_0008s0470 Medicago truncatula MTR_0008s0470 N 0.691
PGSC0003DMG400016292 Solanum tuberosum PGSC0003DMG400016292 I 0.691
PK08038.1 Cannabis sativa PK08038.1 I 0.690
MDP0000407613 Malus domestica MDP0000407613 N 0.690
Eucgr.D00040 Eucalyptus grandis Eucgr.D00040 I 0.689
Gorai.004G183500 Gossypium raimondii Gorai.004G183500 I 0.689
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I 0.689
PGSC0003DMG400013405 Solanum tuberosum PGSC0003DMG400013405 I 0.688
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.687
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.687
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.687
cassava44907.m1 Manihot esculenta cassava44907.m1 I 0.687
OB04G25860 Oryza brachyantha OB04G25860 I 0.686
Ca_22597 Cicer arietinum Ca_22597 N 0.686
cassava47180.m1 Manihot esculenta cassava47180.m1 I 0.685
PK20358.1 Cannabis sativa PK20358.1 I 0.685
Cla006077 Citrullus lanatus Cla006077 I 0.685
PGSC0003DMG400015087 Solanum tuberosum PGSC0003DMG400015087 N 0.685
GLYMA12G11390 Glycine max GLYMA12G11390 N 0.685
Lus10033737.g Linum usitatissimum Lus10033737.g N 0.684
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.684
Solyc03g005570.2 Solanum lycopersicum Solyc03g005570.2 I 0.684
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.683
Aquca_005_00496 Aquilegia coerulea Aquca_005_00496 I 0.682
BRADI3G28830 Brachypodium distachyon BRADI3G28830 I 0.682
TCM_026197 Theobroma cacao TCM_026197 I 0.682
ONIVA04G17140 Oryza nivara ONIVA04G17140 I 0.682
MDP0000131822 Malus domestica MDP0000131822 I 0.682
VIT_16s0039g01710 Vitis vinifera VIT_16s0039g01710 I 0.682
MTR_2g089420 Medicago truncatula MTR_2g089420 N 0.681
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I 0.680
Pavir.Ia01684 Panicum virgatum Pavir.Ia01684 I 0.680
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.680
Pavir.J09313 Panicum virgatum Pavir.J09313 I 0.680
Cucsa.126220 Cucumis sativus Cucsa.126220 I 0.680
Lus10022021.g Linum usitatissimum Lus10022021.g I 0.680
Si040527m.g Setaria italica Si040527m.g I 0.680
Cla019747 Citrullus lanatus Cla019747 I 0.680
Sb01g019270 Sorghum bicolor Sb01g019270 I 0.680
Ciclev10022057m.g Citrus clementina Ciclev10022057m.g I 0.678
PGSC0003DMG400026176 Solanum tuberosum PGSC0003DMG400026176 N 0.678
Lus10042561.g Linum usitatissimum Lus10042561.g I 0.678
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.678
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.677
Pm020596 Prunus mume Pm020596 I 0.677
GLYMA06G45547 Glycine max GLYMA06G45547 N 0.677
GSMUA_Achr5G18080_001 Musa acuminata GSMUA_Achr5G18080_001 I 0.677
Solyc09g090130.2 Solanum lycopersicum Solyc09g090130.2 I 0.677
Gorai.007G146200 Gossypium raimondii Gorai.007G146200 I 0.677
Gorai.001G177100 Gossypium raimondii Gorai.001G177100 I 0.677
Ciclev10021699m.g Citrus clementina Ciclev10021699m.g I 0.677
cassava25784.m1 Manihot esculenta cassava25784.m1 I 0.677
PGSC0003DMG400017223 Solanum tuberosum PGSC0003DMG400017223 I 0.677
TCM_004046 Theobroma cacao TCM_004046 I 0.677
evm.TU.supercontig_50.19 Carica papaya evm.TU.supercontig_50.19 I 0.677
PRUPE_ppa021921mg Prunus persica PRUPE_ppa021921mg I 0.677
Eucgr.L02563 Eucalyptus grandis Eucgr.L02563 N 0.676
GSMUA_AchrUn_randomG07900_001 Musa acuminata GSMUA_AchrUn_randomG07900_001 I 0.676
PK18231.1 Cannabis sativa PK18231.1 I 0.676
TCM_030020 Theobroma cacao TCM_030020 I 0.676
Lus10011820.g Linum usitatissimum Lus10011820.g I 0.675
SELMODRAFT_38058 Selaginella moellendorffii SELMODRAFT_38058 I 0.675
Lus10021185.g Linum usitatissimum Lus10021185.g I 0.675
Pavir.Ab02340 Panicum virgatum Pavir.Ab02340 I 0.675
Pavir.Aa01310 Panicum virgatum Pavir.Aa01310 I 0.675
Sb04g026480 Sorghum bicolor Sb04g026480 I 0.675
Gorai.009G236900 Gossypium raimondii Gorai.009G236900 I 0.675
Gorai.013G073000 Gossypium raimondii Gorai.013G073000 N 0.674
Ciclev10020765m.g Citrus clementina Ciclev10020765m.g I 0.674
MTR_0063s0090 Medicago truncatula MTR_0063s0090 N 0.674
orange1.1g039198m.g Citrus sinensis orange1.1g039198m.g I 0.674
Bostr.19424s0318 Boechera stricta Bostr.19424s0318 I 0.673
Cla007705 Citrullus lanatus Cla007705 I 0.673
MDP0000148689 Malus domestica MDP0000148689 N 0.673
Bo7g040780 Brassica oleracea Bo7g040780 I 0.673
Thhalv10022110m.g Eutrema salsugineum Thhalv10022110m.g I 0.673
MYB15 Arabidopsis thaliana AT3G23250 D 0.673
Bo3g081700 Brassica oleracea Bo3g081700 I 0.673
Bra014929 Brassica rapa Bra014929 I 0.673
Bra001907 Brassica rapa Bra001907 I 0.673
Cagra.2181s0015 Capsella grandiflora Cagra.2181s0015 I 0.673
OMERI10G10120 Oryza meridionalis OMERI10G10120 I 0.673
MYB15 Arabidopsis lyrata fgenesh2_kg.3__2539__AT3G23250.1 I 0.673
Cucsa.383620 Cucumis sativus Cucsa.383620 I 0.673
MYB39 Vitis vinifera VIT_02s0012g01650 I 0.672
cassava5261.m1 Manihot esculenta cassava5261.m1 N 0.671
Si018182m.g Setaria italica Si018182m.g I 0.671
SapurV1A.0151s0280 Salix purpurea SapurV1A.0151s0280 I 0.671
SapurV1A.0417s0140 Salix purpurea SapurV1A.0417s0140 N 0.671
GRMZM2G095904 Zea mays GRMZM2G095904 I 0.671
GSMUA_Achr4G18180_001 Musa acuminata GSMUA_Achr4G18180_001 I 0.670
PGSC0003DMG400046667 Solanum tuberosum PGSC0003DMG400046667 N 0.670
F775_20725 Aegilops tauschii F775_20725 I 0.669
GSMUA_Achr2G18090_001 Musa acuminata GSMUA_Achr2G18090_001 I 0.669
evm.TU.supercontig_34.62 Carica papaya evm.TU.supercontig_34.62 N 0.669
MTR_0008s0280 Medicago truncatula MTR_0008s0280 N 0.669
GSMUA_Achr5G03520_001 Musa acuminata GSMUA_Achr5G03520_001 I 0.669
GSMUA_Achr4G27350_001 Musa acuminata GSMUA_Achr4G27350_001 I 0.669
VIT_07s0005g03340 Vitis vinifera VIT_07s0005g03340 I 0.668
Solyc03g093940.1 Solanum lycopersicum Solyc03g093940.1 N 0.668
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.668
GSMUA_Achr1G09180_001 Musa acuminata GSMUA_Achr1G09180_001 I 0.668
Cucsa.053600 Cucumis sativus Cucsa.053600 I 0.668
gene08084-v1.0-hybrid Fragaria vesca gene08084-v1.0-hybrid I 0.668
Bo6g077600 Brassica oleracea Bo6g077600 I 0.667
MTR_0008s0390 Medicago truncatula MTR_0008s0390 N 0.667
PRUPE_ppa017039mg Prunus persica PRUPE_ppa017039mg I 0.667
Pm019588 Prunus mume Pm019588 I 0.667
Carubv10001224m.g Capsella rubella Carubv10001224m.g I 0.666
orange1.1g024492m.g Citrus sinensis orange1.1g024492m.g I 0.666
Cagra.23492s0001 Capsella grandiflora Cagra.23492s0001 I 0.666
Bra036588 Brassica rapa Bra036588 I 0.666
SapurV1A.0233s0280 Salix purpurea SapurV1A.0233s0280 I 0.666
ATMYB86 Arabidopsis lyrata fgenesh2_kg.6__2630__AT5G26660.1 I 0.666
Bostr.29827s0161 Boechera stricta Bostr.29827s0161 I 0.666
Thhalv10004450m.g Eutrema salsugineum Thhalv10004450m.g I 0.666
MYB86 Arabidopsis thaliana AT5G26660 I 0.666
Eucgr.K03262 Eucalyptus grandis Eucgr.K03262 I 0.666
LjSGA_022617.1 Lotus japonicus LjSGA_022617.1 I 0.666
Bo9g010860 Brassica oleracea Bo9g010860 I 0.666
Bo2g156300 Brassica oleracea Bo2g156300 I 0.666
Bo7g095130 Brassica oleracea Bo7g095130 I 0.666
GLYMA03G31980 Glycine max GLYMA03G31980 I 0.666
MTR_7g115650 Medicago truncatula MTR_7g115650 I 0.666
Solyc10g005550.1 Solanum lycopersicum Solyc10g005550.1 I 0.665
30169.m006322 Ricinus communis 30169.m006322 I 0.665
POPTR_0008s16660 Populus trichocarpa POPTR_0008s16660 I 0.665
Lus10041145.g Linum usitatissimum Lus10041145.g I 0.665
Eucgr.D00751 Eucalyptus grandis Eucgr.D00751 I 0.665
gene02214-v1.0-hybrid Fragaria vesca gene02214-v1.0-hybrid I 0.665
MTR_0251s0050 Medicago truncatula MTR_0251s0050 N 0.665
Eucgr.D00037 Eucalyptus grandis Eucgr.D00037 N 0.665
gw1.106.41.1 Physcomitrella patens gw1.106.41.1 I 0.665
PRUPE_ppa019280mg Prunus persica PRUPE_ppa019280mg I 0.665
Pavir.Ga00752 Panicum virgatum Pavir.Ga00752 I 0.664
GLYMA10G32410 Glycine max GLYMA10G32410 I 0.664
Si010384m.g Setaria italica Si010384m.g I 0.664
Eucgr.K00077 Eucalyptus grandis Eucgr.K00077 I 0.663
chr3.LjT47O18.70.nc Lotus japonicus chr3.LjT47O18.70.nc N 0.663
e_gw1.317.17.1 Physcomitrella patens e_gw1.317.17.1 I 0.663
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.663
MTR_5g029840 Medicago truncatula MTR_5g029840 I 0.662
Ca_12226 Cicer arietinum Ca_12226 I 0.662
Si008086m.g Setaria italica Si008086m.g I 0.662
MDP0000286526 Malus domestica MDP0000286526 I 0.662
Solyc08g076700.1 Solanum lycopersicum Solyc08g076700.1 I 0.661