MTR_7g115650 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_7g115650 T274949_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.713 0.774
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.713 0.774
MYB15
M07084_2.00 		Arabidopsis thaliana
NNNHNNHHNHHYCACCWAMYH
DRKTWGGTGRDDNDDNNDNNN		 Dap-seq
OMalley et al.(2016)
ATY19_col_a 		0.706 0.774
MYB15
M02699_2.00 		Arabidopsis thaliana
CCACCTACCSBBG
CVVSGGTAGGTGG		 SELEX
Mathelier et al.(2014)
MA0574.1 		0.706 0.774
MYB15
M11041_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB15_01 		0.706 0.774
MYB15
M11042_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB15_Q2 		0.706 0.774
MYB58
M07005_2.00 		Arabidopsis thaliana
NNYYYACCWAMCHHH
DDDGKTWGGTRRRNN		 Dap-seq
OMalley et al.(2016)
MYB58_col_a 		0.673 0.753
MYB58
M07006_2.00 		Arabidopsis thaliana
HNNYHYACCWAMCHHHNNNNH
DNNNNDDDGKTWGGTRDRNND		 Dap-seq
OMalley et al.(2016)
MYB58_colamp_a 		0.673 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH24596 Myb 14 61
KEH24596 Myb 67 112

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA03G41100 Glycine max GLYMA03G41100 I 0.795
GLYMA19G43740 Glycine max GLYMA19G43740 I 0.786
Ca_12226 Cicer arietinum Ca_12226 I 0.772
MTR_7g096930 Medicago truncatula MTR_7g096930 I 0.771
Eucgr.B02144 Eucalyptus grandis Eucgr.B02144 I 0.768
Pavir.Gb00650 Panicum virgatum Pavir.Gb00650 I 0.754
Ciclev10022057m.g Citrus clementina Ciclev10022057m.g I 0.753
gene11462-v1.0-hybrid Fragaria vesca gene11462-v1.0-hybrid I 0.752
Sb06g022660 Sorghum bicolor Sb06g022660 I 0.749
POPTR_0002s03960 Populus trichocarpa POPTR_0002s03960 I 0.749
Si018182m.g Setaria italica Si018182m.g I 0.748
POPTR_0005s24550 Populus trichocarpa POPTR_0005s24550 I 0.748
cassava37350.valid.m1 Manihot esculenta cassava37350.valid.m1 I 0.745
SapurV1A.0006s0790 Salix purpurea SapurV1A.0006s0790 I 0.744
AC206901.3_FG005 Zea mays AC206901.3_FG005 I 0.739
Ciclev10005629m.g Citrus clementina Ciclev10005629m.g I 0.739
orange1.1g024484m.g Citrus sinensis orange1.1g024484m.g I 0.739
Bo3g081700 Brassica oleracea Bo3g081700 I 0.739
Bra001907 Brassica rapa Bra001907 I 0.739
F775_32664 Aegilops tauschii F775_32664 I 0.737
Traes_2DL_7183519F8 Triticum aestivum Traes_2DL_7183519F8 I 0.737
BGIOSGA006005 Oryza indica BGIOSGA006005 I 0.735
ORGLA02G0213400 Oryza glaberrima ORGLA02G0213400 I 0.735
Solyc09g090130.2 Solanum lycopersicum Solyc09g090130.2 I 0.735
PGSC0003DMG400017223 Solanum tuberosum PGSC0003DMG400017223 I 0.735
MYB30 Oryza sativa OS02G0624300 I 0.735
ORUFI02G25970 Oryza rufipogon ORUFI02G25970 I 0.735
Thhalv10008531m.g Eutrema salsugineum Thhalv10008531m.g I 0.734
ORUFI04G20280 Oryza rufipogon ORUFI04G20280 I 0.733
GLYMA03G31980 Glycine max GLYMA03G31980 I 0.733
ORGLA04G0158700 Oryza glaberrima ORGLA04G0158700 I 0.733
Si010814m.g Setaria italica Si010814m.g I 0.733
SapurV1A.0233s0280 Salix purpurea SapurV1A.0233s0280 I 0.733
Ciclev10021699m.g Citrus clementina Ciclev10021699m.g I 0.731
PK20358.1 Cannabis sativa PK20358.1 I 0.730
PGSC0003DMG400013405 Solanum tuberosum PGSC0003DMG400013405 I 0.729
ONIVA04G17140 Oryza nivara ONIVA04G17140 I 0.729
GRMZM2G127857 Zea mays GRMZM2G127857 I 0.728
OB02G31990 Oryza brachyantha OB02G31990 I 0.726
GRMZM2G048295 Zea mays GRMZM2G048295 I 0.725
TCM_026197 Theobroma cacao TCM_026197 I 0.724
Pavir.Aa01310 Panicum virgatum Pavir.Aa01310 I 0.722
chr5.CM0071.410.nd Lotus japonicus chr5.CM0071.410.nd I 0.722
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.722
Pavir.Ab02340 Panicum virgatum Pavir.Ab02340 I 0.722
Bra015481 Brassica rapa Bra015481 I 0.721
Bo5g007320 Brassica oleracea Bo5g007320 I 0.721
PK08038.1 Cannabis sativa PK08038.1 I 0.720
orange1.1g024492m.g Citrus sinensis orange1.1g024492m.g I 0.720
Gorai.007G146200 Gossypium raimondii Gorai.007G146200 I 0.719
MDP0000230141 Malus domestica MDP0000230141 I 0.719
MDP0000435315 Malus domestica MDP0000435315 I 0.719
TCM_004046 Theobroma cacao TCM_004046 I 0.719
Pm009364 Prunus mume Pm009364 I 0.719
Gorai.001G177100 Gossypium raimondii Gorai.001G177100 I 0.719
PRUPE_ppa020190mg Prunus persica PRUPE_ppa020190mg I 0.719
Cla006077 Citrullus lanatus Cla006077 I 0.718
cassava35427.valid.m1 Manihot esculenta cassava35427.valid.m1 I 0.717
Solyc03g005570.2 Solanum lycopersicum Solyc03g005570.2 I 0.717
OB04G25860 Oryza brachyantha OB04G25860 I 0.716
VIT_05s0049g01020 Vitis vinifera VIT_05s0049g01020 I 0.716
Thhalv10017136m.g Eutrema salsugineum Thhalv10017136m.g I 0.715
Bo4g176020 Brassica oleracea Bo4g176020 I 0.715
Bo4g176030 Brassica oleracea Bo4g176030 I 0.715
Bra018267 Brassica rapa Bra018267 I 0.715
MDP0000897594 Malus domestica MDP0000897594 I 0.715
GLYMA19G34740 Glycine max GLYMA19G34740 I 0.714
BRADI3G49180 Brachypodium distachyon BRADI3G49180 I 0.714
Traes_6DL_991931CF9 Triticum aestivum Traes_6DL_991931CF9 I 0.714
VIT_05s0049g01010 Vitis vinifera VIT_05s0049g01010 I 0.714
TRIUR3_12302 Triticum urartu TRIUR3_12302 I 0.714
Traes_6BL_E5A9546C9 Triticum aestivum Traes_6BL_E5A9546C9 I 0.714
Traes_6DL_BBAC725C3 Triticum aestivum Traes_6DL_BBAC725C3 I 0.714
MLOC_34646 Hordeum vulgare MLOC_34646 I 0.714
MLOC_43806 Hordeum vulgare MLOC_43806 I 0.714
Bo3g025100 Brassica oleracea Bo3g025100 I 0.713
ATMYB13 Arabidopsis thaliana AT1G06180 D 0.713
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I 0.713
ATMYB13 Arabidopsis lyrata fgenesh2_kg.1__590__AT1G06180.1 I 0.713
GSMUA_Achr5G18600_001 Musa acuminata GSMUA_Achr5G18600_001 I 0.712
evm.TU.supercontig_50.19 Carica papaya evm.TU.supercontig_50.19 I 0.712
GRMZM2G095904 Zea mays GRMZM2G095904 I 0.712
Bra014929 Brassica rapa Bra014929 I 0.709
Cagra.2181s0015 Capsella grandiflora Cagra.2181s0015 I 0.709
Thhalv10022110m.g Eutrema salsugineum Thhalv10022110m.g I 0.709
Bo7g040780 Brassica oleracea Bo7g040780 I 0.709
Bostr.19424s0318 Boechera stricta Bostr.19424s0318 I 0.709
chr1.CM0295.20.nd Lotus japonicus chr1.CM0295.20.nd I 0.708
Lus10041145.g Linum usitatissimum Lus10041145.g I 0.708
Cucsa.383620 Cucumis sativus Cucsa.383620 I 0.708
Cla007705 Citrullus lanatus Cla007705 I 0.708
cassava3286.m1 Manihot esculenta cassava3286.m1 I 0.707
PGSC0003DMG400016292 Solanum tuberosum PGSC0003DMG400016292 I 0.707
SapurV1A.0021s0930 Salix purpurea SapurV1A.0021s0930 I 0.707
Solyc06g053610.2 Solanum lycopersicum Solyc06g053610.2 I 0.707
MYB15 Arabidopsis thaliana AT3G23250 D 0.706
GLYMA10G32410 Glycine max GLYMA10G32410 I 0.706
GLYMA20G35180 Glycine max GLYMA20G35180 I 0.706
MYB15 Arabidopsis lyrata fgenesh2_kg.3__2539__AT3G23250.1 I 0.706
cassava25784.m1 Manihot esculenta cassava25784.m1 I 0.706
GLYMA10G30860 Glycine max GLYMA10G30860 I 0.706
F775_29501 Aegilops tauschii F775_29501 I 0.705
Gorai.011G173900 Gossypium raimondii Gorai.011G173900 I 0.705
F775_30010 Aegilops tauschii F775_30010 I 0.705
Traes_6AL_E1D3D8DAA1 Triticum aestivum Traes_6AL_E1D3D8DAA1 I 0.705
BRADI3G49190 Brachypodium distachyon BRADI3G49190 I 0.704
Traes_6AL_BB730675A Triticum aestivum Traes_6AL_BB730675A I 0.703
PK03488.1 Cannabis sativa PK03488.1 I 0.703
Traes_6AL_54D562BC2 Triticum aestivum Traes_6AL_54D562BC2 I 0.702
Bra022831 Brassica rapa Bra022831 I 0.702
Solyc05g055030.1 Solanum lycopersicum Solyc05g055030.1 I 0.700
GSMUA_Achr1G09180_001 Musa acuminata GSMUA_Achr1G09180_001 I 0.700
MDP0000145050 Malus domestica MDP0000145050 I 0.700
PGSC0003DMG400023405 Solanum tuberosum PGSC0003DMG400023405 I 0.700
VIT_07s0005g03340 Vitis vinifera VIT_07s0005g03340 I 0.698
Pm020596 Prunus mume Pm020596 I 0.698
LjSGA_022617.1 Lotus japonicus LjSGA_022617.1 I 0.698
Lus10021871.g Linum usitatissimum Lus10021871.g I 0.698
TCM_020889 Theobroma cacao TCM_020889 I 0.698
SapurV1A.0483s0100 Salix purpurea SapurV1A.0483s0100 I 0.697
SapurV1A.1746s0010 Salix purpurea SapurV1A.1746s0010 I 0.697
cassava47180.m1 Manihot esculenta cassava47180.m1 I 0.697
Sb04g026480 Sorghum bicolor Sb04g026480 I 0.697
Traes_2BL_0501BC320 Triticum aestivum Traes_2BL_0501BC320 I 0.697
Gorai.013G088200 Gossypium raimondii Gorai.013G088200 I 0.696
BRADI5G15760 Brachypodium distachyon BRADI5G15760 I 0.696
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.693
GSMUA_Achr11G00410_001 Musa acuminata GSMUA_Achr11G00410_001 I 0.692
Carubv10015750m.g Capsella rubella Carubv10015750m.g I 0.692
Cucsa.118450 Cucumis sativus Cucsa.118450 I 0.692
Bra021708 Brassica rapa Bra021708 I 0.691
30169.m006322 Ricinus communis 30169.m006322 I 0.690
Ca_12130 Cicer arietinum Ca_12130 I 0.690
gene29961-v1.0-hybrid Fragaria vesca gene29961-v1.0-hybrid I 0.690
Eucgr.K03262 Eucalyptus grandis Eucgr.K03262 I 0.690
Lus10003557.g Linum usitatissimum Lus10003557.g I 0.689
POPTR_0019s03490 Populus trichocarpa POPTR_0019s03490 I 0.689
Bostr.7128s0256 Boechera stricta Bostr.7128s0256 I 0.689
Bo1g102190 Brassica oleracea Bo1g102190 I 0.689
Lus10033889.g Linum usitatissimum Lus10033889.g I 0.689
POPTR_0008s16660 Populus trichocarpa POPTR_0008s16660 I 0.689
Bra023742 Brassica rapa Bra023742 I 0.689
MTR_2g089620 Medicago truncatula MTR_2g089620 I 0.688
Cla021845 Citrullus lanatus Cla021845 I 0.688
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I 0.688
Ca_14119 Cicer arietinum Ca_14119 I 0.688
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.687
Cucsa.053600 Cucumis sativus Cucsa.053600 I 0.686
GSMUA_Achr4G18180_001 Musa acuminata GSMUA_Achr4G18180_001 I 0.685
Solyc06g083900.2 Solanum lycopersicum Solyc06g083900.2 I 0.685
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.685
MYB14 Arabidopsis thaliana AT2G31180 I 0.685
PGSC0003DMG400020071 Solanum tuberosum PGSC0003DMG400020071 I 0.685
ATMYB14 Arabidopsis lyrata Al_scaffold_0004_1573 I 0.685
Ca_11228 Cicer arietinum Ca_11228 I 0.684
Cla019747 Citrullus lanatus Cla019747 I 0.683
Cucsa.126220 Cucumis sativus Cucsa.126220 I 0.683
GSMUA_Achr11G17870_001 Musa acuminata GSMUA_Achr11G17870_001 I 0.683
PRUPE_ppa026315mg Prunus persica PRUPE_ppa026315mg I 0.682
Cagra.7286s0009 Capsella grandiflora Cagra.7286s0009 I 0.682
mgf011672m Mimulus guttatus mgf011672m I 0.682
Carubv10023905m.g Capsella rubella Carubv10023905m.g I 0.682
Pm011057 Prunus mume Pm011057 I 0.682
MTR_1g076150 Medicago truncatula MTR_1g076150 I 0.681
MTR_5g007370 Medicago truncatula MTR_5g007370 I 0.681
Bra001472 Brassica rapa Bra001472 I 0.680
Bo3g065150 Brassica oleracea Bo3g065150 I 0.680
Lus10022021.g Linum usitatissimum Lus10022021.g I 0.680
GLYMA02G00820 Glycine max GLYMA02G00820 I 0.679
GLYMA10G00930 Glycine max GLYMA10G00930 I 0.679
cassava34465.m1 Manihot esculenta cassava34465.m1 I 0.678
GSMUA_AchrUn_randomG15560_001 Musa acuminata GSMUA_AchrUn_randomG15560_001 I 0.678
cassava38174.valid.m1 Manihot esculenta cassava38174.valid.m1 I 0.678
Cagra.1671s0249 Capsella grandiflora Cagra.1671s0249 I 0.678
Cla014358 Citrullus lanatus Cla014358 I 0.678
Cucsa.104340 Cucumis sativus Cucsa.104340 I 0.678
chr6.CM1613.30.nc Lotus japonicus chr6.CM1613.30.nc I 0.677
Bostr.25219s0339 Boechera stricta Bostr.25219s0339 I 0.676
Cucsa.388490 Cucumis sativus Cucsa.388490 I 0.676
SapurV1A.0039s0080 Salix purpurea SapurV1A.0039s0080 I 0.675
Solyc05g051550.1 Solanum lycopersicum Solyc05g051550.1 I 0.675
PRUPE_ppa021921mg Prunus persica PRUPE_ppa021921mg I 0.674
POPTR_0005s09930 Populus trichocarpa POPTR_0005s09930 I 0.674
Solyc10g005550.1 Solanum lycopersicum Solyc10g005550.1 I 0.673
PGSC0003DMG400011243 Solanum tuberosum PGSC0003DMG400011243 I 0.673
MYB58 Arabidopsis thaliana AT1G16490 D 0.673
GSMUA_Achr5G03520_001 Musa acuminata GSMUA_Achr5G03520_001 I 0.673
GSMUA_Achr4G27350_001 Musa acuminata GSMUA_Achr4G27350_001 I 0.673
MTR_4g478180 Medicago truncatula MTR_4g478180 I 0.672
TCM_031294 Theobroma cacao TCM_031294 I 0.672
Gorai.002G077200 Gossypium raimondii Gorai.002G077200 I 0.672
SapurV1A.0085s0540 Salix purpurea SapurV1A.0085s0540 I 0.672
Lus10042561.g Linum usitatissimum Lus10042561.g I 0.671
Traes_6AL_52227091B Triticum aestivum Traes_6AL_52227091B I 0.671
VIT_19s0085g00050 Vitis vinifera VIT_19s0085g00050 I 0.671
BRADI3G58770 Brachypodium distachyon BRADI3G58770 I 0.671
GLYMA01G09280 Glycine max GLYMA01G09280 I 0.671
Aquca_017_00716 Aquilegia coerulea Aquca_017_00716 I 0.671
TRIUR3_23397 Triticum urartu TRIUR3_23397 I 0.671
Gorai.002G106300 Gossypium raimondii Gorai.002G106300 I 0.670
MTR_5g029840 Medicago truncatula MTR_5g029840 I 0.669
evm.TU.supercontig_12.22 Carica papaya evm.TU.supercontig_12.22 I 0.669
SapurV1A.0555s0160 Salix purpurea SapurV1A.0555s0160 I 0.668
MDP0000133542 Malus domestica MDP0000133542 I 0.668
Lus10021185.g Linum usitatissimum Lus10021185.g I 0.667
Traes_6DL_FCDEB9A8B Triticum aestivum Traes_6DL_FCDEB9A8B I 0.667
F775_27569 Aegilops tauschii F775_27569 I 0.667
Lus10011820.g Linum usitatissimum Lus10011820.g I 0.667
Ca_11494 Cicer arietinum Ca_11494 I 0.667
Gorai.003G183700 Gossypium raimondii Gorai.003G183700 I 0.667
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I 0.666
TCM_025488 Theobroma cacao TCM_025488 I 0.666
GLYMA12G01960 Glycine max GLYMA12G01960 I 0.666
GLYMA11G11570 Glycine max GLYMA11G11570 I 0.666
chr3.CM0127.290.nc Lotus japonicus chr3.CM0127.290.nc I 0.666
POPTR_0001s02240 Populus trichocarpa POPTR_0001s02240 I 0.665
Ciclev10009050m.g Citrus clementina Ciclev10009050m.g I 0.665
gene08084-v1.0-hybrid Fragaria vesca gene08084-v1.0-hybrid I 0.665
orange1.1g045387m.g Citrus sinensis orange1.1g045387m.g I 0.665
Carubv10011190m.g Capsella rubella Carubv10011190m.g I 0.664
GLYMA12G32610 Glycine max GLYMA12G32610 I 0.664
Thhalv10008436m.g Eutrema salsugineum Thhalv10008436m.g I 0.664
MDP0000168728 Malus domestica MDP0000168728 I 0.664
Bra026720 Brassica rapa Bra026720 I 0.664
chr3.CM0711.160.nd Lotus japonicus chr3.CM0711.160.nd I 0.664
ATMYB58 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001492 I 0.664
Bo8g105490 Brassica oleracea Bo8g105490 I 0.664
Cagra.0824s0021 Capsella grandiflora Cagra.0824s0021 I 0.664
Ciclev10020765m.g Citrus clementina Ciclev10020765m.g I 0.663
MTR_1g043050 Medicago truncatula MTR_1g043050 I 0.663
orange1.1g039198m.g Citrus sinensis orange1.1g039198m.g I 0.663
MTR_1g043080 Medicago truncatula MTR_1g043080 I 0.663
GSMUA_Achr5G12230_001 Musa acuminata GSMUA_Achr5G12230_001 I 0.663
TCM_032927 Theobroma cacao TCM_032927 I 0.662
POPTR_0007s08190 Populus trichocarpa POPTR_0007s08190 I 0.662
GLYMA08G17861 Glycine max GLYMA08G17861 I 0.662
Cla013669 Citrullus lanatus Cla013669 I 0.662
GLYMA13G37820 Glycine max GLYMA13G37820 I 0.661