cassava26895.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava26895.m1 T284138_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava26895.m1 Myb 14 61
cassava26895.m1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I 0.742
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.715
Ciclev10018311m.g Citrus clementina Ciclev10018311m.g I 0.703
Ciclev10017435m.g Citrus clementina Ciclev10017435m.g I 0.703
Lus10018518.g Linum usitatissimum Lus10018518.g N 0.694
TRIUR3_31731 Triticum urartu TRIUR3_31731 I 0.692
TCM_007868 Theobroma cacao TCM_007868 I 0.692
Ciclev10017677m.g Citrus clementina Ciclev10017677m.g I 0.692
PK29337.1 Cannabis sativa PK29337.1 I 0.690
SapurV1A.0417s0150 Salix purpurea SapurV1A.0417s0150 I 0.689
POPTR_0019s14120 Populus trichocarpa POPTR_0019s14120 I 0.689
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I 0.686
GLYMA06G45531 Glycine max GLYMA06G45531 N 0.686
GLYMA06G45520 Glycine max GLYMA06G45520 N 0.685
GLYMA12G11490 Glycine max GLYMA12G11490 N 0.681
BGIOSGA031688 Oryza indica BGIOSGA031688 I 0.674
Lus10033737.g Linum usitatissimum Lus10033737.g N 0.674
ORUFI10G14060 Oryza rufipogon ORUFI10G14060 I 0.674
OS10G0478300 Oryza sativa OS10G0478300 I 0.674
SapurV1A.2051s0040 Salix purpurea SapurV1A.2051s0040 I 0.671
SapurV1A.0048s0170 Salix purpurea SapurV1A.0048s0170 I 0.671
OB0039G10010 Oryza brachyantha OB0039G10010 I 0.670
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I 0.670
Gorai.013G071600 Gossypium raimondii Gorai.013G071600 I 0.665
Pm015303 Prunus mume Pm015303 I 0.665
Gorai.013G072900 Gossypium raimondii Gorai.013G072900 I 0.665
gene01997-v1.0-hybrid Fragaria vesca gene01997-v1.0-hybrid I 0.661
PRUPE_ppa025095mg Prunus persica PRUPE_ppa025095mg I 0.661