POPTR_0011s04000 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0011s04000 T278408_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0011s04000.1 Myb 39 86
POPTR_0011s04000.1 Myb 92 137

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0011s04010 Populus trichocarpa POPTR_0011s04010 N 0.761
POPTR_0011s04020 Populus trichocarpa POPTR_0011s04020 N 0.756
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.715
TCM_033016 Theobroma cacao TCM_033016 N 0.710
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.707
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.705
PK20358.1 Cannabis sativa PK20358.1 I 0.703
POPTR_0004s02570 Populus trichocarpa POPTR_0004s02570 I 0.703
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.702
29933.m001454 Ricinus communis 29933.m001454 N 0.700
cassava5261.m1 Manihot esculenta cassava5261.m1 N 0.698
GLYMA03G31980 Glycine max GLYMA03G31980 I 0.697
Cla006077 Citrullus lanatus Cla006077 I 0.694
GSMUA_Achr4G18180_001 Musa acuminata GSMUA_Achr4G18180_001 I 0.693
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I 0.693
GLYMA10G32410 Glycine max GLYMA10G32410 I 0.692
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.690
cassava5263.m1 Manihot esculenta cassava5263.m1 N 0.688
Ciclev10008921m.g Citrus clementina Ciclev10008921m.g I 0.688
Gorai.007G146200 Gossypium raimondii Gorai.007G146200 I 0.686
Ciclev10021699m.g Citrus clementina Ciclev10021699m.g I 0.686
Gorai.001G177100 Gossypium raimondii Gorai.001G177100 I 0.686
TCM_004046 Theobroma cacao TCM_004046 I 0.686
MYB14 Arabidopsis thaliana AT2G31180 I 0.685
Bra018267 Brassica rapa Bra018267 I 0.685
Bo4g176030 Brassica oleracea Bo4g176030 I 0.685
Bo4g176020 Brassica oleracea Bo4g176020 I 0.685
Thhalv10017136m.g Eutrema salsugineum Thhalv10017136m.g I 0.685
ATMYB14 Arabidopsis lyrata Al_scaffold_0004_1573 I 0.685
PK03488.1 Cannabis sativa PK03488.1 I 0.684
Bo3g025100 Brassica oleracea Bo3g025100 I 0.682
OMERI04G13500 Oryza meridionalis OMERI04G13500 I 0.680
Traes_2BL_361925B62 Triticum aestivum Traes_2BL_361925B62 I 0.680
Pavir.Ga01401 Panicum virgatum Pavir.Ga01401 I 0.680
Si012130m.g Setaria italica Si012130m.g I 0.680
F775_22620 Aegilops tauschii F775_22620 I 0.680
BGIOSGA014912 Oryza indica BGIOSGA014912 I 0.680
OB04G23000 Oryza brachyantha OB04G23000 I 0.680
OGLUM04G15520 Oryza glumaepatula OGLUM04G15520 I 0.680
Sb06g019650 Sorghum bicolor Sb06g019650 I 0.680
OPUNC04G13560 Oryza punctata OPUNC04G13560 I 0.680
TRIUR3_35325 Triticum urartu TRIUR3_35325 I 0.680
GRMZM2G173633 Zea mays GRMZM2G173633 I 0.680
ONIVA04G13800 Oryza nivara ONIVA04G13800 I 0.680
ORUFI04G17000 Oryza rufipogon ORUFI04G17000 I 0.680
ORGLA04G0126700 Oryza glaberrima ORGLA04G0126700 I 0.680
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I 0.679
Gorai.011G173900 Gossypium raimondii Gorai.011G173900 I 0.678
PRUPE_ppa021719mg Prunus persica PRUPE_ppa021719mg I 0.677
Cucsa.041880 Cucumis sativus Cucsa.041880 I 0.677
Gorai.009G454000 Gossypium raimondii Gorai.009G454000 I 0.677
cassava33918.m1 Manihot esculenta cassava33918.m1 I 0.677
GLYMA18G07960 Glycine max GLYMA18G07960 I 0.677
Aquca_005_00315 Aquilegia coerulea Aquca_005_00315 I 0.677
TCM_030529 Theobroma cacao TCM_030529 I 0.677
Eucgr.F03656 Eucalyptus grandis Eucgr.F03656 I 0.677
MTR_3g461490 Medicago truncatula MTR_3g461490 I 0.677
Solyc10g005760.1 Solanum lycopersicum Solyc10g005760.1 I 0.677
PGSC0003DMG400008687 Solanum tuberosum PGSC0003DMG400008687 I 0.677
Ca_17657 Cicer arietinum Ca_17657 I 0.677
GLYMA19G34740 Glycine max GLYMA19G34740 I 0.677
AtMYB103 Vitis vinifera VIT_19s0015g01280 I 0.677
Cagra.7286s0009 Capsella grandiflora Cagra.7286s0009 I 0.676
Carubv10023905m.g Capsella rubella Carubv10023905m.g I 0.676
orange1.1g024492m.g Citrus sinensis orange1.1g024492m.g I 0.675
GLYMA20G35180 Glycine max GLYMA20G35180 I 0.674
Ciclev10005629m.g Citrus clementina Ciclev10005629m.g I 0.673
TCM_033015 Theobroma cacao TCM_033015 N 0.673
orange1.1g024484m.g Citrus sinensis orange1.1g024484m.g I 0.673
Lus10042561.g Linum usitatissimum Lus10042561.g I 0.672
Pavir.Aa01310 Panicum virgatum Pavir.Aa01310 I 0.672
Bra022831 Brassica rapa Bra022831 I 0.672
Pavir.Ab02340 Panicum virgatum Pavir.Ab02340 I 0.672
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.672
LPERR04G12420 Leersia perrieri LPERR04G12420 I 0.671
TCM_020889 Theobroma cacao TCM_020889 I 0.670
gene01457-v1.0-hybrid Fragaria vesca gene01457-v1.0-hybrid I 0.670
Lus10003557.g Linum usitatissimum Lus10003557.g I 0.669
POPTR_0005s24550 Populus trichocarpa POPTR_0005s24550 I 0.669
cassava25784.m1 Manihot esculenta cassava25784.m1 I 0.669
cassava37350.valid.m1 Manihot esculenta cassava37350.valid.m1 I 0.669
Lus10033889.g Linum usitatissimum Lus10033889.g I 0.669
POPTR_0011s17060 Populus trichocarpa POPTR_0011s17060 I 0.668
Eucgr.D00040 Eucalyptus grandis Eucgr.D00040 I 0.668
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I 0.668
Pavir.Aa01159 Panicum virgatum Pavir.Aa01159 I 0.667
Si017704m.g Setaria italica Si017704m.g I 0.667
Eucgr.K03262 Eucalyptus grandis Eucgr.K03262 I 0.666
PK08038.1 Cannabis sativa PK08038.1 I 0.666
Cla004524 Citrullus lanatus Cla004524 I 0.666
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.666
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.665
VIT_07s0005g03340 Vitis vinifera VIT_07s0005g03340 I 0.665
cassava35427.valid.m1 Manihot esculenta cassava35427.valid.m1 I 0.665
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.665
MDP0000145050 Malus domestica MDP0000145050 I 0.664
Pavir.J10932 Panicum virgatum Pavir.J10932 I 0.664
Traes_2DL_54E6F0446 Triticum aestivum Traes_2DL_54E6F0446 I 0.663
Traes_2AL_CC403D182 Triticum aestivum Traes_2AL_CC403D182 I 0.663
F775_18231 Aegilops tauschii F775_18231 I 0.663
MLOC_53640 Hordeum vulgare MLOC_53640 I 0.663
Traes_2BL_FD8C2F815 Triticum aestivum Traes_2BL_FD8C2F815 I 0.663
Traes_2BL_34A0848F2 Triticum aestivum Traes_2BL_34A0848F2 I 0.663
TRIUR3_18702 Triticum urartu TRIUR3_18702 I 0.663
Traes_2DL_D39684C41 Triticum aestivum Traes_2DL_D39684C41 I 0.663
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.662
PGSC0003DMG400017223 Solanum tuberosum PGSC0003DMG400017223 I 0.662
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.662
GRMZM2G095904 Zea mays GRMZM2G095904 I 0.662
Cucsa.053600 Cucumis sativus Cucsa.053600 I 0.662
Solyc09g090130.2 Solanum lycopersicum Solyc09g090130.2 I 0.662
BRADI5G13041 Brachypodium distachyon BRADI5G13041 I 0.662
PGSC0003DMG400016292 Solanum tuberosum PGSC0003DMG400016292 I 0.661
TCM_007865 Theobroma cacao TCM_007865 I 0.661
MDP0000155426 Malus domestica MDP0000155426 I 0.661
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.661
Solyc06g053610.2 Solanum lycopersicum Solyc06g053610.2 I 0.661
SapurV1A.1746s0010 Salix purpurea SapurV1A.1746s0010 I 0.661