CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1.C_230193
(
Phytophthora capsici
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
estExt_Genewise1.C_230193
T290825_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Phyra73031
M02332_2.00
Phytophthora ramorum
NDRKTCAGTN
NACTGAMYHN
PBM
Weirauch et al.(2014)
pTH7816
0.757
0.775
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1.C_230193
Myb
95
141
PKRWTQDEDEKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVL
estExt_Genewise1.C_230193
Myb
147
192
KGHWRPEEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHL
estExt_Genewise1.C_230193
Myb
198
242
RGEYTAEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSL
Links
Other
Myb/SANT
family TFs
Other
Phytophthora capsici
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy