PDK_20s1584192g001 (Phoenix dactylifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PDK_20s1584192g001 T291175_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT5G56840
M07144_2.00
Arabidopsis thaliana
WWYMTTATCCAWWWN

NWWWTGGATAAKRWW
Dap-seq
OMalley et al.(2016)
AT5G56840_col_a
0.664 0.773
AT5G56840
M07145_2.00
Arabidopsis thaliana
HHHWWYHTTATCCWHW

WDWGGATAADRWWDDD
Dap-seq
OMalley et al.(2016)
AT5G56840_colamp_a
0.664 0.773
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1584192g001 Myb 472 516

Links

Other Myb/SANT family TFs
Other Phoenix dactylifera TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29912.m005387 Ricinus communis 29912.m005387 I 0.668
AT5G56840 Arabidopsis thaliana AT5G56840 D 0.664
Bo9g127350 Brassica oleracea Bo9g127350 I 0.699
Bostr.26833s0577 Boechera stricta Bostr.26833s0577 I 0.699
Cagra.4138s0007 Capsella grandiflora Cagra.4138s0007 I 0.699
Carubv10026949m.g Capsella rubella Carubv10026949m.g I 0.699
chr2.CM0373.230.nd Lotus japonicus chr2.CM0373.230.nd I 0.667
Cla010879 Citrullus lanatus Cla010879 I 0.668
Eucgr.C00908 Eucalyptus grandis Eucgr.C00908 I 0.667
gene11419-v1.0-hybrid Fragaria vesca gene11419-v1.0-hybrid I 0.667
Gorai.006G274300 Gossypium raimondii Gorai.006G274300 I 0.668
GSMUA_Achr11G00670_001 Musa acuminata GSMUA_Achr11G00670_001 I 0.676
MDP0000537549 Malus domestica MDP0000537549 I 0.667
MDP0000875621 Malus domestica MDP0000875621 I 0.667
PDK_20s1503511g002 Phoenix dactylifera PDK_20s1503511g002 I 0.694
PK11714.1 Cannabis sativa PK11714.1 I 0.676
Pm027228 Prunus mume Pm027228 I 0.667
POPTR_0006s15480 Populus trichocarpa POPTR_0006s15480 I 0.676
PRUPE_ppa008425mg Prunus persica PRUPE_ppa008425mg I 0.667
scaffold_802240.1 Arabidopsis lyrata scaffold_802240.1 I 0.689
Thhalv10014394m.g Eutrema salsugineum Thhalv10014394m.g I 0.699
VIT_04s0008g00900 Vitis vinifera VIT_04s0008g00900 I 0.676
VIT_11s0016g02410 Vitis vinifera VIT_11s0016g02410 I 0.676