CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDK_20s1584192g001
(
Phoenix dactylifera
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
PDK_20s1584192g001
T291175_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT5G56840
M07144_2.00
Arabidopsis thaliana
WWYMTTATCCAWWWN
NWWWTGGATAAKRWW
Dap-seq
OMalley et al.(2016)
AT5G56840_col_a
0.664
0.773
AT5G56840
M07145_2.00
Arabidopsis thaliana
HHHWWYHTTATCCWHW
WDWGGATAADRWWDDD
Dap-seq
OMalley et al.(2016)
AT5G56840_colamp_a
0.664
0.773
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1584192g001
Myb
472
516
GVPWIEEEHTTCLAGLLKLGEGDWRGISRHFVTTKTPTQVANHAQ
Links
Other
Myb/SANT
family TFs
Other
Phoenix dactylifera
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy