CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002166953.1
(
Hydra magnipapillata
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
XP_002166953.1
T291257_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Myb
M00179_2.00
Mus musculus
HAACGGHHNN
NNDDCCGTTD
PBM
Badis et al.(2009)
Myb_1047
0.661
0.714
MYB
M08150_2.00
Homo sapiens
NNCAACTGHN
NDCAGTTGNN
ChIP-seq
Mathelier et al.(2014)
MA0100.3
0.661
0.714
MYB
M09260_2.00
Homo sapiens
NYAACKGYYDNH
DNHRRCMGTTRN
Misc
Kulakovskiy et al.(2013)
MYB_HUMAN.H11MO.0.A
0.661
0.714
Myb
M09261_2.00
Mus musculus
NYAACKGHHNBN
NVNDDCMGTTRN
Misc
Kulakovskiy et al.(2013)
MYB_MOUSE.H11MO.0.A
0.661
0.714
Myb
M09601_2.00
Mus musculus
YAACBGYC
GRCVGTTR
Misc
Heinz et al.(2010)
ERMYB-Myb_GSE22095
0.661
0.714
MYB
M11050_2.00
Homo sapiens
CMVNCAACBGYCNBYNBV
BVNRVNGRCVGTTGNBKG
Transfac
Matys et al.(2006)
V$CMYB_01
0.661
0.714
MYB
M11051_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CMYB_Q5
0.661
0.714
MYB
M11052_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYB_Q3
0.661
0.714
MYB
M11053_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYB_Q4
0.661
0.714
MYB
M11054_2.00
Homo sapiens
VNNAACKDBB
VVHMGTTNNB
Transfac
Matys et al.(2006)
V$MYB_Q6
0.661
0.714
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002166953.1
Myb
30
76
KSKWTKSDDNRLKELCQEFGTYDWSFIASHFPRHTEIQCQQRWKKVL
XP_002166953.1
Myb
82
128
KGAWTKEEDDLVTELVLKYGPKKWSLIASHLKGRIGKQCRERWHNHL
XP_002166953.1
Myb
134
179
KTAWSEEEDRLIFDAHDRMGNRWADIAKLLPGRTDNAIKNHWNSTM
Links
Other
Myb/SANT
family TFs
Other
Hydra magnipapillata
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy