anac016 (Arabidopsis thaliana)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 AT1G34180 T292026_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
anac016
M07172_2.00		 Arabidopsis thaliana
DVCKTGNBNNNCAMG
CKTGNNNVNCAMGBH		 Dap-seq
OMalley et al.(2016)
ANAC016_col_a		 (Direct) (Direct)
anac016
M07173_2.00		 Arabidopsis thaliana
TVCKTGNBNNNCAMG
CKTGNNNVNCAMGBA		 Dap-seq
OMalley et al.(2016)
ANAC016_colamp_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC017
M07174_2.00 		Arabidopsis thaliana
NCKTGNBNNNCAMGNWA
TWNCKTGNNNVNCAMGN		 Dap-seq
OMalley et al.(2016)
ANAC017_colamp_v31 		0.920 0.895
NAC017
M07175_2.00 		Arabidopsis thaliana
NDNTTNCTTGBNNNNCAMG
CKTGNNNNVCAAGNAANHN		 Dap-seq
OMalley et al.(2016)
ANAC017_col 		0.920 0.895
NAC017
M11078_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT1G34190_Q2 		0.920 0.895
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G34180.1 NAC/NAM 17 143
AT1G34180.2 NAC/NAM 17 155
AT1G34180.3 NAC/NAM 17 143
AT1G34180.4 NAC/NAM 17 155

Links

Other NAC/NAM family TFs
Other Arabidopsis thaliana TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
anac016 Arabidopsis lyrata fgenesh2_kg.1__3525__AT1G34180.1 I 0.961
Cagra.3375s0006 Capsella grandiflora Cagra.3375s0006 I 0.950
Carubv10008706m.g Capsella rubella Carubv10008706m.g I 0.950
Bra028039 Brassica rapa Bra028039 I 0.947
Bostr.1040s0051 Boechera stricta Bostr.1040s0051 I 0.942
Bra034439 Brassica rapa Bra034439 I 0.936
Bo5g085440 Brassica oleracea Bo5g085440 I 0.936
Bo8g027120 Brassica oleracea Bo8g027120 I 0.934
Bra036744 Brassica rapa Bra036744 I 0.934
Bo6g044390 Brassica oleracea Bo6g044390 I 0.934
Thhalv10007196m.g Eutrema salsugineum Thhalv10007196m.g I 0.933
Cagra.3375s0004 Capsella grandiflora Cagra.3375s0004 I 0.926
Carubv10008761m.g Capsella rubella Carubv10008761m.g I 0.926
anac017 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1003048 I 0.926
NAC017 Arabidopsis thaliana AT1G34190 D 0.923
Bra034436 Brassica rapa Bra034436 I 0.922
Thhalv10007221m.g Eutrema salsugineum Thhalv10007221m.g I 0.918
Bostr.1040s0050 Boechera stricta Bostr.1040s0050 I 0.918
cassava19069.valid.m1 Manihot esculenta cassava19069.valid.m1 I 0.880
Bo5g085430 Brassica oleracea Bo5g085430 I 0.879