CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo3g009490
(
Brassica oleracea
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bo3g009490
T292344_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo3g009490.1
NAC/NAM
16
141
PVGYRFHPTEQELILHYLLPKAFSSPLPSSIIPVFDVFFSHPLTFPGDQEERQRYFFSKKRQEVSSNDHRIKISSGNGYWKPIRKERGVIACGRTVGIRRTLVFYGTNSSSSSSNKIRWCMTEYCL
Links
Other
NAC/NAM
family TFs
Other
Brassica oleracea
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra006229
Brassica rapa
Bra006229
N
0.963
Bra008788
Brassica rapa
Bra008788
N
0.932
Bostr.2902s0136
Boechera stricta
Bostr.2902s0136
N
0.924
anac084
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6001091
N
0.924
anac084
Arabidopsis thaliana
AT5G14000
N
0.923
Thhalv10014659m.g
Eutrema salsugineum
Thhalv10014659m.g
N
0.922
Bo9g166250
Brassica oleracea
Bo9g166250
N
0.916
Cagra.3166s0006
Capsella grandiflora
Cagra.3166s0006
N
0.899
Carubv10001688m.g
Capsella rubella
Carubv10001688m.g
N
0.899