Bo7g087220 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo7g087220 T292449_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC59
M11080_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANAC059_01
0.958 0.895
NAC92
M00979_2.00
Arabidopsis thaliana
NNDYACGBHA

TDVCGTRHNN
PBM
Lindemose et al.(2014)
ANAC092
0.958 0.877
NAC92
M00730_2.00
Arabidopsis thaliana
DYACGNHAN

NTDNCGTRH
PBM
Chang et al.(2013)
pTH7335
0.958 0.877
NAC92
M07234_2.00
Arabidopsis thaliana
TWNCKTGHNNHDCAMGYWAY

RTWRCKTGHDNNDCAMGNWA
Dap-seq
OMalley et al.(2016)
ANAC092_colamp_a
0.958 0.877
NAC92
M07235_2.00
Arabidopsis thaliana
WRCKTGTNNNDCAMG

CKTGHNNNACAMGYW
Dap-seq
OMalley et al.(2016)
ANAC092_col_v3a
0.958 0.877
NAC100
M02375_2.00
Arabidopsis thaliana
NBAMKNHWNN

NNWDNMKTVN
PBM
Weirauch et al.(2014)
pTH7239
0.941 0.842
ANAC100
M02377_2.00
Arabidopsis lyrata
DYACGYHANN

NNTDRCGTRH
PBM
Weirauch et al.(2014)
pTH9234
0.934 0.833
NAC079
M02373_2.00
Arabidopsis thaliana
TTGCGTRY

RYACGCAA
PBM
Weirauch et al.(2014)
pTH7399
0.933 0.842
NAC079
M07228_2.00
Arabidopsis thaliana
CBWNHNNHACACGYWA

TWRCGTGTDNNDNWVG
Dap-seq
OMalley et al.(2016)
ANAC079_colamp_a
0.933 0.842
NAC079
M07229_2.00
Arabidopsis thaliana
NTWNCKTVHNNHWCAMGYWAH

DTWRCKTGWDNNDBAMGNWAN
Dap-seq
OMalley et al.(2016)
ANAC079_col
0.933 0.842
ANAC080
M02376_2.00
Arabidopsis lyrata
NBAMKNHWNN

NNWDNMKTVN
PBM
Weirauch et al.(2014)
pTH9230
0.932 0.825
NAC098
M07239_2.00
Arabidopsis thaliana
CKTGTNNNDYAMGYHA

TDRCKTRHNNNACAMG
Dap-seq
OMalley et al.(2016)
CUC2_colamp_a
0.907 0.772
NAC098
M07240_2.00
Arabidopsis thaliana
NNNTWNCKTGHNNHWCAMG

CKTGWDNNDCAMGNWANNN
Dap-seq
OMalley et al.(2016)
CUC2_col
0.907 0.772
ANAC087
M07232_2.00
Arabidopsis thaliana
TDNCKTSHNNNDYACGYHANB

VNTDRCGTRHNNNDSAMGNHA
Dap-seq
OMalley et al.(2016)
ANAC087_colamp_a
0.880 0.754
ANAC087
M07233_2.00
Arabidopsis thaliana
TWNCKTGWNNNDCAMGYHA

TDRCKTGHNNNWCAMGNWA
Dap-seq
OMalley et al.(2016)
ANAC087_col_v3a
0.880 0.754
NAC054
M07205_2.00
Arabidopsis thaliana
CKTVHNNHRCACGYHANCW

WGNTDRCGTGYDNNDBAMG
Dap-seq
OMalley et al.(2016)
CUC1_colamp_a
0.876 0.737
NAC054
M07206_2.00
Arabidopsis thaliana
TWNCKTGHNNNDCAMG

CKTGHNNNDCAMGNWA
Dap-seq
OMalley et al.(2016)
CUC1_col_v31
0.876 0.737
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g087220.1 NAC/NAM 21 145

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

Invalid Input OrderBy

281 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action