CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ANAC040
(
Arabidopsis lyrata
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
fgenesh2_kg.4__689__AT2G27300.1
T292976_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NTL8
M00975_2.00
Arabidopsis thaliana
TWNCYYHNNN
NNNDRRGNWA
PBM
Lindemose et al.(2014)
NTL8
0.918
0.886
NTL8
M07190_2.00
Arabidopsis thaliana
NTTNCTTCDHNNNNARGNA
TNCYTNNNNDHGAAGNAAN
Dap-seq
OMalley et al.(2016)
NTL8_col
0.918
0.886
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.4__689__AT2G27300.1
NAC/NAM
15
140
FPGFRFSPTDVELISYYLRRKIDGDEDSVAVIAEVEIYKFEPWDLPEESKLKSENEWFYFCARGRKYPHGSQSRRATKLGYWKATGKERTVKSGNQFVGTKRTLVFHIGRAPRGERTEWIMHEYCI
Links
Other
NAC/NAM
family TFs
Other
Arabidopsis lyrata
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy