ORGLA01G0055000 (Oryza glaberrima)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 ORGLA01G0055000 T294734_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK27085.1
M01293_2.00
Cannabis sativa
AATTTATT

AATAAATT
PBM
Lambert et al.(2019)
pTH11262
0.994 0.921
anac075
M07223_2.00
Arabidopsis thaliana
CTTSWNNNWYAMGYT

ARCKTRWNNNWSAAG
Dap-seq
OMalley et al.(2016)
ANAC075_col_a
0.993 0.921
NAC010
M07167_2.00
Arabidopsis thaliana
NWWNCTTSWNNNWYAMGHHWYH

DRWDDCKTRWNNNWSAAGNWWN
Dap-seq
OMalley et al.(2016)
SND3_colamp_a
0.973 0.728
NAC010
M07168_2.00
Arabidopsis thaliana
CKTSWNNNWYAMGYW

WRCKTRWNNNWSAMG
Dap-seq
OMalley et al.(2016)
SND3_col_b
0.973 0.728
NAC073
M07221_2.00
Arabidopsis thaliana
CTTSWNNNWYAMGYH

DRCKTRWNNNWSAAG
Dap-seq
OMalley et al.(2016)
SND2_col_a
0.953 0.719
NAC073
M07222_2.00
Arabidopsis thaliana
CKTSWNNNWYACGYW

WRCGTRWNNNWSAMG
Dap-seq
OMalley et al.(2016)
SND2_colamp_a
0.953 0.719
PK11990.1
M01290_2.00
Cannabis sativa
DNAHDNHDNN

NNHDNHDTNH
PBM
Lambert et al.(2019)
pTH11336
0.933 0.763
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA01G0055000.1 NAC/NAM 97 238

Links

Other NAC/NAM family TFs
Other Oryza glaberrima TFs

351 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACLA_021410 Aspergillus clavatus CADACLAG00002561 N 0.000
fgenesh1_pg.00042_#_210 Aspergillus carbonarius fgenesh1_pg.00042_#_210 N 0.000
U727_00432720111 Penicillium solitum U727_00432720111 N 0.000
PITC_091390 Penicillium italicum PITC_091390 N 0.000
PDIP_67050 Penicillium digitatum PDIP_67050 N 0.000
PCH_Pc16g12600 Penicillium rubens PCH_Pc16g12600 N 0.000
EURHEDRAFT_447212 Aspergillus ruber EURHEDRAFT_447212 N 0.000
NFIA_011410 Neosartorya fischeri CADNFIAG00000993 N 0.000
CADAORAG00006035 Aspergillus oryzae CADAORAG00006035 N 0.000
ANIA_00714 Aspergillus nidulans CADANIAG00001954 N 0.000
CADANGAG00001188 Aspergillus niger CADANGAG00001188 N 0.000
AFUA_1G14060 Aspergillus fumigatus CADAFUAG00007701 N 0.000
CADAFLAG00003606 Aspergillus flavus CADAFLAG00003606 N 0.000
Pc16g12600 Penicillium chrysogenum Pc16g12600 N 0.000