PGSC0003DMG400004740 (Solanum tuberosum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 PGSC0003DMG400004740 T295101_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC007
M07164_2.00 		Arabidopsis thaliana
TTRCKTVHDNNNYAMG
CKTRNNNHDBAMGYAA		 Dap-seq
OMalley et al.(2016)
VND4_colamp_a 		0.889 0.817
NAC007
M07165_2.00 		Arabidopsis thaliana
TGCKTVHDNHDYAMG
CKTRHDNHDBAMGCA		 Dap-seq
OMalley et al.(2016)
VND4_col 		0.889 0.817
NAC105
M00980_2.00 		Arabidopsis thaliana
NYWHKNHWNN
NNWDNMDWRN		 PBM
Lindemose et al.(2014)
VND3 		0.886 0.788
NAC105
M07245_2.00 		Arabidopsis thaliana
NTTGCTTVNNNHNYAMG
CKTRNDNNNBAAGCAAN		 Dap-seq
OMalley et al.(2016)
VND3_colamp_a 		0.886 0.788
NAC105
M07246_2.00 		Arabidopsis thaliana
TTGCTTVHNNHNYAMG
CKTRNDNNDBAAGCAA		 Dap-seq
OMalley et al.(2016)
VND3_col 		0.886 0.788
NAC037
M07187_2.00 		Arabidopsis thaliana
CKTVNDNHNYAMG
CKTRNDNHNBAMG		 Dap-seq
OMalley et al.(2016)
VND1_col_a 		0.883 0.808
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400012079 NAC/NAM 8 141

Links

Other NAC/NAM family TFs
Other Solanum tuberosum TFs

208 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc08g079120.1 Solanum lycopersicum Solyc08g079120.1 I 0.965
Ca_02365 Cicer arietinum Ca_02365 I 0.946
Gorai.008G236400 Gossypium raimondii Gorai.008G236400 I 0.945
GLYMA05G04250 Glycine max GLYMA05G04250 I 0.942
GLYMA17G14700 Glycine max GLYMA17G14700 I 0.942
PK23416.1 Cannabis sativa PK23416.1 I 0.935
orange1.1g020354m.g Citrus sinensis orange1.1g020354m.g I 0.932
LjSGA_013013.1 Lotus japonicus LjSGA_013013.1 I 0.932
Ciclev10024218m.g Citrus clementina Ciclev10024218m.g I 0.932
MTR_4g101680 Medicago truncatula MTR_4g101680 I 0.930
Lus10004338.g Linum usitatissimum Lus10004338.g I 0.929
Cucsa.302120 Cucumis sativus Cucsa.302120 I 0.929
gene32254-v1.0-hybrid Fragaria vesca gene32254-v1.0-hybrid I 0.927
SELMODRAFT_57388 Selaginella moellendorffii SELMODRAFT_57388 I 0.927
SELMODRAFT_451784 Selaginella moellendorffii SELMODRAFT_451784 I 0.927
mgf020336m Mimulus guttatus mgf020336m I 0.926
SapurV1A.0634s0120 Salix purpurea SapurV1A.0634s0120 I 0.924
Pm023559 Prunus mume Pm023559 I 0.924
PRUPE_ppa015786mg Prunus persica PRUPE_ppa015786mg I 0.924
Lus10024601.g Linum usitatissimum Lus10024601.g I 0.924
GRMZM2G178998 Zea mays GRMZM2G178998 I 0.923
cassava46384.m1 Manihot esculenta cassava46384.m1 I 0.923
SapurV1A.1275s0070 Salix purpurea SapurV1A.1275s0070 I 0.921
TCM_016035 Theobroma cacao TCM_016035 I 0.921
POPTR_0001s00220 Populus trichocarpa POPTR_0001s00220 I 0.921
POPTR_0003s11250 Populus trichocarpa POPTR_0003s11250 I 0.921
PK28510.1 Cannabis sativa PK28510.1 I 0.921
28200.m000189 Ricinus communis 28200.m000189 I 0.921
evm.TU.supercontig_29.118 Carica papaya evm.TU.supercontig_29.118 I 0.921
Lus10032238.g Linum usitatissimum Lus10032238.g I 0.919
MTR_5g012080 Medicago truncatula MTR_5g012080 I 0.918
VIT_02s0154g00020 Vitis vinifera VIT_02s0154g00020 I 0.917
Gorai.003G169000 Gossypium raimondii Gorai.003G169000 I 0.914
GLYMA11G03340 Glycine max GLYMA11G03340 I 0.913
LjSGA_069569.1 Lotus japonicus LjSGA_069569.1 I 0.913
MTR_5g021710 Medicago truncatula MTR_5g021710 I 0.912
Gorai.001G048200 Gossypium raimondii Gorai.001G048200 I 0.912
orange1.1g018596m.g Citrus sinensis orange1.1g018596m.g I 0.912
TCM_014939 Theobroma cacao TCM_014939 I 0.912
Sb06g023780 Sorghum bicolor Sb06g023780 I 0.912
Ciclev10006988m.g Citrus clementina Ciclev10006988m.g I 0.912
Eucgr.A02887 Eucalyptus grandis Eucgr.A02887 I 0.912
Gorai.007G048000 Gossypium raimondii Gorai.007G048000 I 0.911
Lus10031142.g Linum usitatissimum Lus10031142.g I 0.911
Lus10031721.g Linum usitatissimum Lus10031721.g I 0.911
Pavir.Gb00744 Panicum virgatum Pavir.Gb00744 I 0.911
Pavir.J07126 Panicum virgatum Pavir.J07126 I 0.911
Si010504m.g Setaria italica Si010504m.g I 0.911
Ca_08693 Cicer arietinum Ca_08693 I 0.910
mgf021916m Mimulus guttatus mgf021916m I 0.909
PGSC0003DMG400021576 Solanum tuberosum PGSC0003DMG400021576 I 0.908
Solyc06g034340.1 Solanum lycopersicum Solyc06g034340.1 I 0.908
PRUPE_ppa020139mg Prunus persica PRUPE_ppa020139mg I 0.908
POPTR_0015s14770 Populus trichocarpa POPTR_0015s14770 I 0.908
VIT_16s0022g00690 Vitis vinifera VIT_16s0022g00690 I 0.908
GLYMA06G47680 Glycine max GLYMA06G47680 I 0.908
30147.m014211 Ricinus communis 30147.m014211 I 0.908
Ca_01981 Cicer arietinum Ca_01981 I 0.908
Pm019490 Prunus mume Pm019490 I 0.908
Pm019488 Prunus mume Pm019488 I 0.908
BGIOSGA005950 Oryza indica BGIOSGA005950 I 0.908
GLYMA01G37310 Glycine max GLYMA01G37310 I 0.908
GLYMA11G07990 Glycine max GLYMA11G07990 I 0.908
ORUFI04G21580 Oryza rufipogon ORUFI04G21580 I 0.907
ORGLA04G0171200 Oryza glaberrima ORGLA04G0171200 I 0.907
OS04G0536500 Oryza sativa OS04G0536500 I 0.907
Cucsa.251620 Cucumis sativus Cucsa.251620 I 0.907
Cla006372 Citrullus lanatus Cla006372 I 0.907
MDP0000226701 Malus domestica MDP0000226701 I 0.907
OPUNC04G17680 Oryza punctata OPUNC04G17680 I 0.907
Solyc03g083880.2 Solanum lycopersicum Solyc03g083880.2 I 0.907
OB04G27030 Oryza brachyantha OB04G27030 I 0.907
OMERI03G30800 Oryza meridionalis OMERI03G30800 I 0.907
OBART04G20020 Oryza barthii OBART04G20020 I 0.907
OGLUM04G19900 Oryza glumaepatula OGLUM04G19900 I 0.907
ONIVA04G18230 Oryza nivara ONIVA04G18230 I 0.907
LPERR04G16200 Leersia perrieri LPERR04G16200 I 0.907
BGIOSGA014649 Oryza indica BGIOSGA014649 I 0.907
GLYMA09G36600 Glycine max GLYMA09G36600 I 0.906
Cucsa.320590 Cucumis sativus Cucsa.320590 I 0.906
MLOC_56103 Hordeum vulgare MLOC_56103 I 0.906
OGLUM02G26220 Oryza glumaepatula OGLUM02G26220 I 0.905
AMTR_s00011p00251570 Amborella trichopoda AMTR_s00011p00251570 I 0.905
OMERI02G25220 Oryza meridionalis OMERI02G25220 I 0.905
OB02G33070 Oryza brachyantha OB02G33070 I 0.905
OBART02G25700 Oryza barthii OBART02G25700 I 0.905
LPERR02G21010 Leersia perrieri LPERR02G21010 I 0.905
cassava47039.m1 Manihot esculenta cassava47039.m1 I 0.905
OS02G0643600 Oryza sativa OS02G0643600 I 0.905
ORUFI02G27110 Oryza rufipogon ORUFI02G27110 I 0.905
ONIVA02G28150 Oryza nivara ONIVA02G28150 I 0.905
Aquca_013_00692 Aquilegia coerulea Aquca_013_00692 I 0.904
gene21248-v1.0-hybrid Fragaria vesca gene21248-v1.0-hybrid I 0.904
POPTR_0012s14660 Populus trichocarpa POPTR_0012s14660 I 0.904
MDP0000246470 Malus domestica MDP0000246470 I 0.903
MDP0000254112 Malus domestica MDP0000254112 I 0.903
GLYMA04G13660 Glycine max GLYMA04G13660 I 0.903
MDP0000221977 Malus domestica MDP0000221977 I 0.902
MDP0000131126 Malus domestica MDP0000131126 I 0.902
F775_08057 Aegilops tauschii F775_08057 I 0.902
TRIUR3_20707 Triticum urartu TRIUR3_20707 I 0.902
Traes_6DL_D0BE06357 Triticum aestivum Traes_6DL_D0BE06357 I 0.902
Traes_6AL_BB7207AD1 Triticum aestivum Traes_6AL_BB7207AD1 I 0.902
Traes_6BL_8F77BF933 Triticum aestivum Traes_6BL_8F77BF933 I 0.902
SELMODRAFT_89986 Selaginella moellendorffii SELMODRAFT_89986 I 0.902
SELMODRAFT_93824 Selaginella moellendorffii SELMODRAFT_93824 I 0.902
Thhalv10005380m.g Eutrema salsugineum Thhalv10005380m.g I 0.901
OPUNC02G23550 Oryza punctata OPUNC02G23550 I 0.901
Bo7g065010 Brassica oleracea Bo7g065010 I 0.901
GLYMA02G05620 Glycine max GLYMA02G05620 I 0.901
Bra012065 Brassica rapa Bra012065 I 0.901
Bostr.0568s0042 Boechera stricta Bostr.0568s0042 I 0.900
Carubv10026898m.g Capsella rubella Carubv10026898m.g I 0.900
ANAC105 Arabidopsis lyrata fgenesh2_kg.8__2792__AT5G66300.1 I 0.900
Cagra.10427s0040 Capsella grandiflora Cagra.10427s0040 I 0.900
SELMODRAFT_408624 Selaginella moellendorffii SELMODRAFT_408624 I 0.899
GLYMA12G00760 Glycine max GLYMA12G00760 I 0.899
Cagra.1670s0031 Capsella grandiflora Cagra.1670s0031 I 0.899
SapurV1A.0129s0210 Salix purpurea SapurV1A.0129s0210 I 0.899
Carubv10022351m.g Capsella rubella Carubv10022351m.g I 0.899
SELMODRAFT_402243 Selaginella moellendorffii SELMODRAFT_402243 I 0.899
Cla005768 Citrullus lanatus Cla005768 I 0.898
OLONG_018618 Oryza longistaminata OLONG_018618 I 0.898
BRADI3G50067 Brachypodium distachyon BRADI3G50067 I 0.898
GLYMA16G24200 Glycine max GLYMA16G24200 I 0.897
GRMZM2G354151 Zea mays GRMZM2G354151 I 0.897
MTR_4g036030 Medicago truncatula MTR_4g036030 I 0.894
Bostr.22157s0066 Boechera stricta Bostr.22157s0066 I 0.894
Si017679m.g Setaria italica Si017679m.g I 0.893
GRMZM2G315140 Zea mays GRMZM2G315140 I 0.893
VND5 Arabidopsis lyrata fgenesh2_kg.2__212__AT1G62700.1 I 0.893
Pavir.J39804 Panicum virgatum Pavir.J39804 I 0.893
POPTR_0007s13910 Populus trichocarpa POPTR_0007s13910 I 0.892
OGLUM06G18230 Oryza glumaepatula OGLUM06G18230 I 0.890
ORUFI06G18140 Oryza rufipogon ORUFI06G18140 I 0.890
OB06G24850 Oryza brachyantha OB06G24850 I 0.890
OPUNC06G15490 Oryza punctata OPUNC06G15490 I 0.890
ONIVA06G20460 Oryza nivara ONIVA06G20460 I 0.890
LPERR06G14120 Leersia perrieri LPERR06G14120 I 0.890
OS06G0530400 Oryza sativa OS06G0530400 I 0.890
OBART06G17120 Oryza barthii OBART06G17120 I 0.890
BGIOSGA021116 Oryza indica BGIOSGA021116 I 0.890
OMERI06G17980 Oryza meridionalis OMERI06G17980 I 0.890
Cagra.0568s0135 Capsella grandiflora Cagra.0568s0135 I 0.889
Bra016783 Brassica rapa Bra016783 I 0.889
Thhalv10007823m.g Eutrema salsugineum Thhalv10007823m.g I 0.889
NAC007 Arabidopsis thaliana AT1G12260 D 0.889
Bo8g062650 Brassica oleracea Bo8g062650 I 0.889
Gorai.003G010700 Gossypium raimondii Gorai.003G010700 I 0.889
VND4 Arabidopsis lyrata fgenesh2_kg.1__1330__AT1G12260.1 I 0.889
Carubv10009366m.g Capsella rubella Carubv10009366m.g I 0.889
Aquca_007_00369 Aquilegia coerulea Aquca_007_00369 I 0.889
Bostr.13671s0233 Boechera stricta Bostr.13671s0233 I 0.889
BRADI1G52187 Brachypodium distachyon BRADI1G52187 I 0.887
F775_07224 Aegilops tauschii F775_07224 I 0.887
Traes_7DS_7F0AF83B0 Triticum aestivum Traes_7DS_7F0AF83B0 I 0.887
Traes_7AS_6398221B7 Triticum aestivum Traes_7AS_6398221B7 I 0.887
MDP0000320566 Malus domestica MDP0000320566 I 0.887
Traes_4AL_F853C8660 Triticum aestivum Traes_4AL_F853C8660 I 0.887
MLOC_53086 Hordeum vulgare MLOC_53086 I 0.887
TRIUR3_08851 Triticum urartu TRIUR3_08851 I 0.887
NAC105 Arabidopsis thaliana AT5G66300 D 0.886
Sb04g033570 Sorghum bicolor Sb04g033570 I 0.886
NAC037 Arabidopsis thaliana AT2G18060 D 0.883
evm.TU.supercontig_3.311 Carica papaya evm.TU.supercontig_3.311 I 0.883
PK11173.1 Cannabis sativa PK11173.1 I 0.883
Thhalv10022756m.g Eutrema salsugineum Thhalv10022756m.g I 0.882
Bra039915 Brassica rapa Bra039915 I 0.882
SELMODRAFT_100973 Selaginella moellendorffii SELMODRAFT_100973 I 0.882
SELMODRAFT_71405 Selaginella moellendorffii SELMODRAFT_71405 I 0.882
MLOC_15746 Hordeum vulgare MLOC_15746 I 0.881
Bra026981 Brassica rapa Bra026981 I 0.881
VND1 Arabidopsis lyrata Al_scaffold_0003_3772 I 0.881
Bo8g108300 Brassica oleracea Bo8g108300 I 0.881
Traes_2BL_24E6E8DF9 Triticum aestivum Traes_2BL_24E6E8DF9 I 0.881
Cla014492 Citrullus lanatus Cla014492 I 0.881
Traes_2AL_82C3E7E14 Triticum aestivum Traes_2AL_82C3E7E14 I 0.881
TCM_000235 Theobroma cacao TCM_000235 I 0.878
Ciclev10026114m.g Citrus clementina Ciclev10026114m.g I 0.878
orange1.1g021187m.g Citrus sinensis orange1.1g021187m.g I 0.878
PGSC0003DMG401003552 Solanum tuberosum PGSC0003DMG401003552 I 0.878
POPTR_0005s11870 Populus trichocarpa POPTR_0005s11870 I 0.878
evm.TU.supercontig_6.226 Carica papaya evm.TU.supercontig_6.226 I 0.878
ANAC076 Vitis vinifera VIT_04s0023g03110 I 0.878
Solyc02g084350.2 Solanum lycopersicum Solyc02g084350.2 I 0.878
cassava24947.valid.m1 Manihot esculenta cassava24947.valid.m1 I 0.878
SapurV1A.0487s0230 Salix purpurea SapurV1A.0487s0230 I 0.878
Bo7g011640 Brassica oleracea Bo7g011640 I 0.877
Solyc12g017400.1 Solanum lycopersicum Solyc12g017400.1 I 0.877
Traes_2DL_343FA6101 Triticum aestivum Traes_2DL_343FA6101 I 0.877
Cucsa.043420 Cucumis sativus Cucsa.043420 I 0.877
PGSC0003DMG400009665 Solanum tuberosum PGSC0003DMG400009665 I 0.877
Gorai.004G201100 Gossypium raimondii Gorai.004G201100 I 0.876
GSMUA_Achr11G03040_001 Musa acuminata GSMUA_Achr11G03040_001 I 0.875
PDK_20s1306451g001 Phoenix dactylifera PDK_20s1306451g001 I 0.875
GSMUA_Achr8G12100_001 Musa acuminata GSMUA_Achr8G12100_001 I 0.875
Aquca_006_00155 Aquilegia coerulea Aquca_006_00155 I 0.875
Gorai.007G196400 Gossypium raimondii Gorai.007G196400 I 0.875
Bo3g093950 Brassica oleracea Bo3g093950 I 0.875
Bo5g017120 Brassica oleracea Bo5g017120 I 0.873
orange1.1g046523m.g Citrus sinensis orange1.1g046523m.g I 0.873
Gorai.003G114100 Gossypium raimondii Gorai.003G114100 I 0.873
Ciclev10006623m.g Citrus clementina Ciclev10006623m.g I 0.873
28623.m000400 Ricinus communis 28623.m000400 I 0.873
Eucgr.I02366 Eucalyptus grandis Eucgr.I02366 I 0.872
cassava26615.m1 Manihot esculenta cassava26615.m1 I 0.872
Bra019750 Brassica rapa Bra019750 I 0.872
GSMUA_Achr7G06640_001 Musa acuminata GSMUA_Achr7G06640_001 I 0.872