CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb04g023990
(
Sorghum bicolor
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Sb04g023990
T295540_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb04g023990.1
NAC/NAM
20
144
PPGFRFHPTDEELITHYLARKAADPRFAPRAVGVADLNKCEPWDLPYRATMGEKEWYFFCVKDRKYPTGLRTNRATESGYWKATGKDREIFRGKALVGLKKTLVFYTGRAPRGGKTGWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Sorghum bicolor
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si017567m.g
Setaria italica
Si017567m.g
N
0.986
GRMZM5G898290
Zea mays
GRMZM5G898290
N
0.985
OB02G29280
Oryza brachyantha
OB02G29280
N
0.984
LPERR02G17680
Leersia perrieri
LPERR02G17680
N
0.981
OBART02G21850
Oryza barthii
OBART02G21850
I
0.980
OMERI02G21390
Oryza meridionalis
OMERI02G21390
I
0.980
OS02G0579000
Oryza sativa
OS02G0579000
I
0.980
ORUFI02G22930
Oryza rufipogon
ORUFI02G22930
I
0.980
OGLUM02G22030
Oryza glumaepatula
OGLUM02G22030
I
0.980
ONIVA02G24080
Oryza nivara
ONIVA02G24080
I
0.980
BGIOSGA008492
Oryza indica
BGIOSGA008492
I
0.980
BRADI3G46900
Brachypodium distachyon
BRADI3G46900
I
0.976
Traes_2DL_DF7B995C9
Triticum aestivum
Traes_2DL_DF7B995C9
N
0.976
Traes_2AL_57BF37A86
Triticum aestivum
Traes_2AL_57BF37A86
N
0.976
F775_32832
Aegilops tauschii
F775_32832
N
0.976
Traes_2BL_6AEE8AC28
Triticum aestivum
Traes_2BL_6AEE8AC28
N
0.976
TRIUR3_09915
Triticum urartu
TRIUR3_09915
N
0.976
OLONG_008218
Oryza longistaminata
OLONG_008218
I
0.966
Pavir.J24971
Panicum virgatum
Pavir.J24971
N
0.963
GRMZM2G009892
Zea mays
GRMZM2G009892
I
0.958
LPERR04G11740
Leersia perrieri
LPERR04G11740
I
0.956
Si010553m.g
Setaria italica
Si010553m.g
I
0.956
ORUFI04G16370
Oryza rufipogon
ORUFI04G16370
I
0.955
BGIOSGA016546
Oryza indica
BGIOSGA016546
I
0.955
ORGLA04G0119700
Oryza glaberrima
ORGLA04G0119700
I
0.955
ONIVA04G13100
Oryza nivara
ONIVA04G13100
I
0.955
Pavir.Gb01850
Panicum virgatum
Pavir.Gb01850
I
0.955
OGLUM04G14830
Oryza glumaepatula
OGLUM04G14830
I
0.955
OBART04G14970
Oryza barthii
OBART04G14970
I
0.955
OS04G0460600
Oryza sativa
OS04G0460600
I
0.955
Sb06g019010
Sorghum bicolor
Sb06g019010
I
0.954
F775_20638
Aegilops tauschii
F775_20638
I
0.937
Traes_7AL_74CC91D39
Triticum aestivum
Traes_7AL_74CC91D39
I
0.937
MLOC_65286
Hordeum vulgare
MLOC_65286
I
0.920
GRMZM2G139700
Zea mays
GRMZM2G139700
I
0.916
Bostr.0556s0555
Boechera stricta
Bostr.0556s0555
I
0.903
AMTR_s00022p00160350
Amborella trichopoda
AMTR_s00022p00160350
I
0.893
LPERR08G17020
Leersia perrieri
LPERR08G17020
I
0.891
Solyc08g074300.2
Solanum lycopersicum
Solyc08g074300.2
I
0.890
PGSC0003DMG400029593
Solanum tuberosum
PGSC0003DMG400029593
I
0.889
PGSC0003DMG400009920
Solanum tuberosum
PGSC0003DMG400009920
I
0.886
ORGLA08G0177600
Oryza glaberrima
ORGLA08G0177600
I
0.883
ORUFI08G22550
Oryza rufipogon
ORUFI08G22550
I
0.883
OGLUM08G21360
Oryza glumaepatula
OGLUM08G21360
I
0.883
OS08G0511200
Oryza sativa
OS08G0511200
I
0.883
OPUNC08G18240
Oryza punctata
OPUNC08G18240
I
0.877
MLOC_13932
Hordeum vulgare
MLOC_13932
I
0.875
BGIOSGA026695
Oryza indica
BGIOSGA026695
I
0.875
ONIVA08G22710
Oryza nivara
ONIVA08G22710
I
0.875
MTR_1g008740
Medicago truncatula
MTR_1g008740
I
0.871
OS01G0104500
Oryza sativa
OS01G0104500
I
0.871
OB01G10300
Oryza brachyantha
OB01G10300
I
0.871