CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb06g019010
(
Sorghum bicolor
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Sb06g019010
T295561_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC098
M07239_2.00
Arabidopsis thaliana
CKTGTNNNDYAMGYHA
TDRCKTRHNNNACAMG
Dap-seq
OMalley et al.(2016)
CUC2_colamp_a
0.878
0.772
NAC098
M07240_2.00
Arabidopsis thaliana
NNNTWNCKTGHNNHWCAMG
CKTGWDNNDCAMGNWANNN
Dap-seq
OMalley et al.(2016)
CUC2_col
0.878
0.772
e_gw1.327.11.1
M02382_2.00
Physcomitrella patens
NTTDYRTWWN
NWWAYRHAAN
PBM
Weirauch et al.(2014)
pTH8478
0.871
0.693
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb06g019010.1
NAC/NAM
12
139
PPGFRFHPTDEELITHYLARKVADARFAALAVGEADLNKCEPWDLPSLAKMGEKEWYFFCLKDRKYPTGLRTNRATEAGYWKATGKDKDIFRGNGGKVLVGSKKTLVFYTGRAPKGEKSGWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Sorghum bicolor
TFs
166 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART04G14970
Oryza barthii
OBART04G14970
I
0.993
ORUFI04G16370
Oryza rufipogon
ORUFI04G16370
I
0.993
OS04G0460600
Oryza sativa
OS04G0460600
I
0.993
ORGLA04G0119700
Oryza glaberrima
ORGLA04G0119700
I
0.993
BGIOSGA016546
Oryza indica
BGIOSGA016546
I
0.993
Pavir.Gb01850
Panicum virgatum
Pavir.Gb01850
I
0.993
ONIVA04G13100
Oryza nivara
ONIVA04G13100
I
0.993
OGLUM04G14830
Oryza glumaepatula
OGLUM04G14830
I
0.993
Si010553m.g
Setaria italica
Si010553m.g
I
0.992
LPERR04G11740
Leersia perrieri
LPERR04G11740
I
0.991
GRMZM2G009892
Zea mays
GRMZM2G009892
I
0.990
OLONG_008218
Oryza longistaminata
OLONG_008218
I
0.987
F775_32832
Aegilops tauschii
F775_32832
N
0.983
Traes_2BL_6AEE8AC28
Triticum aestivum
Traes_2BL_6AEE8AC28
N
0.983
Traes_2DL_DF7B995C9
Triticum aestivum
Traes_2DL_DF7B995C9
N
0.983
TRIUR3_09915
Triticum urartu
TRIUR3_09915
N
0.983
Traes_2AL_57BF37A86
Triticum aestivum
Traes_2AL_57BF37A86
N
0.982
OB02G29280
Oryza brachyantha
OB02G29280
N
0.981
GRMZM5G898290
Zea mays
GRMZM5G898290
N
0.980
Si017567m.g
Setaria italica
Si017567m.g
N
0.979
LPERR02G17680
Leersia perrieri
LPERR02G17680
N
0.978
OBART02G21850
Oryza barthii
OBART02G21850
I
0.976
ORUFI02G22930
Oryza rufipogon
ORUFI02G22930
I
0.976
BGIOSGA008492
Oryza indica
BGIOSGA008492
I
0.976
ONIVA02G24080
Oryza nivara
ONIVA02G24080
I
0.976
OS02G0579000
Oryza sativa
OS02G0579000
I
0.976
OGLUM02G22030
Oryza glumaepatula
OGLUM02G22030
I
0.976
OMERI02G21390
Oryza meridionalis
OMERI02G21390
I
0.976
BRADI3G46900
Brachypodium distachyon
BRADI3G46900
I
0.973
Pavir.J24971
Panicum virgatum
Pavir.J24971
N
0.971
Cagra.27691s0001
Capsella grandiflora
Cagra.27691s0001
I
0.963
Bostr.0556s0555
Boechera stricta
Bostr.0556s0555
I
0.963
AMTR_s00022p00160350
Amborella trichopoda
AMTR_s00022p00160350
I
0.962
LPERR08G17020
Leersia perrieri
LPERR08G17020
I
0.956
Sb04g023990
Sorghum bicolor
Sb04g023990
N
0.954
OS08G0511200
Oryza sativa
OS08G0511200
I
0.952
ORUFI08G22550
Oryza rufipogon
ORUFI08G22550
I
0.952
OGLUM08G21360
Oryza glumaepatula
OGLUM08G21360
I
0.952
ORGLA08G0177600
Oryza glaberrima
ORGLA08G0177600
I
0.952
PGSC0003DMG400009920
Solanum tuberosum
PGSC0003DMG400009920
I
0.951
ONIVA08G22710
Oryza nivara
ONIVA08G22710
I
0.950
MLOC_13932
Hordeum vulgare
MLOC_13932
I
0.950
BGIOSGA026695
Oryza indica
BGIOSGA026695
I
0.950
OPUNC08G18240
Oryza punctata
OPUNC08G18240
I
0.950
GRMZM2G139700
Zea mays
GRMZM2G139700
I
0.947
MLOC_65286
Hordeum vulgare
MLOC_65286
I
0.945
Traes_7AL_74CC91D39
Triticum aestivum
Traes_7AL_74CC91D39
I
0.945
F775_20638
Aegilops tauschii
F775_20638
I
0.945
OPUNC04G12870
Oryza punctata
OPUNC04G12870
I
0.944
MLOC_65714
Hordeum vulgare
MLOC_65714
N
0.942
OS01G0104500
Oryza sativa
OS01G0104500
I
0.941
OB01G10300
Oryza brachyantha
OB01G10300
I
0.941
LPERR01G00270
Leersia perrieri
LPERR01G00270
I
0.940
MTR_1g008740
Medicago truncatula
MTR_1g008740
I
0.939
OPUNC01G00320
Oryza punctata
OPUNC01G00320
I
0.936
e_gw1.259.32.1
Physcomitrella patens
e_gw1.259.32.1
I
0.935
OLONG_023103
Oryza longistaminata
OLONG_023103
I
0.934
PGSC0003DMG400029593
Solanum tuberosum
PGSC0003DMG400029593
I
0.933
Pavir.J23199
Panicum virgatum
Pavir.J23199
I
0.933
Solyc08g074300.2
Solanum lycopersicum
Solyc08g074300.2
I
0.932
OB04G22290
Oryza brachyantha
OB04G22290
I
0.932
ORGLA12G0187900
Oryza glaberrima
ORGLA12G0187900
I
0.931
ONIVA01G18370
Oryza nivara
ONIVA01G18370
I
0.931
ORUFI01G18470
Oryza rufipogon
ORUFI01G18470
I
0.931
OS01G0393100
Oryza sativa
OS01G0393100
I
0.931
ONIVA01G00280
Oryza nivara
ONIVA01G00280
I
0.931
ORUFI01G00320
Oryza rufipogon
ORUFI01G00320
I
0.931
OMERI01G15230
Oryza meridionalis
OMERI01G15230
I
0.931
OGLUM01G19440
Oryza glumaepatula
OGLUM01G19440
I
0.931
BGIOSGA001578
Oryza indica
BGIOSGA001578
I
0.931
OGLUM01G00350
Oryza glumaepatula
OGLUM01G00350
I
0.931
BGIOSGA002597
Oryza indica
BGIOSGA002597
I
0.931
OBART01G16620
Oryza barthii
OBART01G16620
I
0.931
OLONG_022415
Oryza longistaminata
OLONG_022415
I
0.931
OBART01G00360
Oryza barthii
OBART01G00360
I
0.931
OMERI01G15210
Oryza meridionalis
OMERI01G15210
I
0.928
BRADI5G12407
Brachypodium distachyon
BRADI5G12407
I
0.924
GSMUA_Achr7G23250_001
Musa acuminata
GSMUA_Achr7G23250_001
I
0.912
mgf002183m
Mimulus guttatus
mgf002183m
I
0.906
LPERR06G20430
Leersia perrieri
LPERR06G20430
N
0.900
MLOC_53744
Hordeum vulgare
MLOC_53744
N
0.898
Sb09g008000
Sorghum bicolor
Sb09g008000
N
0.897
OLONG_010248
Oryza longistaminata
OLONG_010248
N
0.897
Si006975m.g
Setaria italica
Si006975m.g
N
0.896
TRIUR3_03895
Triticum urartu
TRIUR3_03895
N
0.895
Traes_7AL_BE3253C8F
Triticum aestivum
Traes_7AL_BE3253C8F
N
0.895
Pavir.Db00380
Panicum virgatum
Pavir.Db00380
N
0.894
Thhalv10012158m.g
Eutrema salsugineum
Thhalv10012158m.g
I
0.893
Aquca_009_00966
Aquilegia coerulea
Aquca_009_00966
I
0.893
gene04424-v1.0-hybrid
Fragaria vesca
gene04424-v1.0-hybrid
I
0.893
Cla010484
Citrullus lanatus
Cla010484
I
0.891
cassava27052.m1
Manihot esculenta
cassava27052.m1
I
0.891
GLYMA18G49620
Glycine max
GLYMA18G49620
I
0.890
MDP0000232050
Malus domestica
MDP0000232050
I
0.887
F775_26920
Aegilops tauschii
F775_26920
N
0.887
MDP0000129335
Malus domestica
MDP0000129335
I
0.887
ONIVA04G29890
Oryza nivara
ONIVA04G29890
I
0.886
BGIOSGA014034
Oryza indica
BGIOSGA014034
I
0.886
OGLUM04G30580
Oryza glumaepatula
OGLUM04G30580
I
0.886
ORUFI04G32410
Oryza rufipogon
ORUFI04G32410
I
0.886
OS04G0691300
Oryza sativa
OS04G0691300
I
0.886
Pavir.J04049
Panicum virgatum
Pavir.J04049
I
0.886
ORGLA04G0270600
Oryza glaberrima
ORGLA04G0270600
I
0.886
GLYMA09G37050
Glycine max
GLYMA09G37050
I
0.885
28649.m000212
Ricinus communis
28649.m000212
I
0.884
SELMODRAFT_86855
Selaginella moellendorffii
SELMODRAFT_86855
I
0.883
SELMODRAFT_71307
Selaginella moellendorffii
SELMODRAFT_71307
I
0.883
Bo5g002810
Brassica oleracea
Bo5g002810
I
0.883
cassava1758.valid.m1
Manihot esculenta
cassava1758.valid.m1
I
0.882
cassava361.valid.m1
Manihot esculenta
cassava361.valid.m1
I
0.882
gw1.1.690.1
Physcomitrella patens
gw1.1.690.1
I
0.882
Aquca_002_00662
Aquilegia coerulea
Aquca_002_00662
I
0.882
AMTR_s00010p00266320
Amborella trichopoda
AMTR_s00010p00266320
I
0.882
Ciclev10012093m.g
Citrus clementina
Ciclev10012093m.g
I
0.881
orange1.1g018950m.g
Citrus sinensis
orange1.1g018950m.g
I
0.881
cassava1757.valid.m1
Manihot esculenta
cassava1757.valid.m1
I
0.878
Bostr.26833s0880
Boechera stricta
Bostr.26833s0880
I
0.878
NAC098
Arabidopsis thaliana
AT5G53950
D
0.878
Carubv10009049m.g
Capsella rubella
Carubv10009049m.g
I
0.878
CUC2
Arabidopsis lyrata
Al_scaffold_0008_1815
I
0.878
Carubv10028330m.g
Capsella rubella
Carubv10028330m.g
I
0.878
Thhalv10013863m.g
Eutrema salsugineum
Thhalv10013863m.g
I
0.878
Bo9g113820
Brassica oleracea
Bo9g113820
I
0.878
Cagra.4622s0005
Capsella grandiflora
Cagra.4622s0005
I
0.878
Cagra.1968s0045
Capsella grandiflora
Cagra.1968s0045
I
0.878
mgf015836m
Mimulus guttatus
mgf015836m
I
0.877
Cla017258
Citrullus lanatus
Cla017258
I
0.876
Pm028711
Prunus mume
Pm028711
I
0.876
Bostr.25375s0002
Boechera stricta
Bostr.25375s0002
I
0.875
evm.TU.supercontig_131.88
Carica papaya
evm.TU.supercontig_131.88
I
0.875
Solyc07g062840.2
Solanum lycopersicum
Solyc07g062840.2
I
0.875
SapurV1A.1325s0010
Salix purpurea
SapurV1A.1325s0010
I
0.875
cassava44869.m1
Manihot esculenta
cassava44869.m1
I
0.875
MDP0000310981
Malus domestica
MDP0000310981
I
0.875
Gorai.002G067300
Gossypium raimondii
Gorai.002G067300
I
0.875
POPTR_0011s11600
Populus trichocarpa
POPTR_0011s11600
I
0.875
PRUPE_ppa026810mg
Prunus persica
PRUPE_ppa026810mg
I
0.875
27950.m000105
Ricinus communis
27950.m000105
I
0.875
Pm011397
Prunus mume
Pm011397
I
0.875
TCM_031619
Theobroma cacao
TCM_031619
I
0.875
SapurV1A.2059s0010
Salix purpurea
SapurV1A.2059s0010
I
0.875
Lus10041924.g
Linum usitatissimum
Lus10041924.g
I
0.874
Gorai.007G079900
Gossypium raimondii
Gorai.007G079900
I
0.874
GRMZM2G003715
Zea mays
GRMZM2G003715
I
0.874
Bostr.5325s0019
Boechera stricta
Bostr.5325s0019
I
0.874
Carubv10009451m.g
Capsella rubella
Carubv10009451m.g
I
0.874
Lus10005537.g
Linum usitatissimum
Lus10005537.g
I
0.874
GRMZM2G052239
Zea mays
GRMZM2G052239
I
0.873
GLYMA05G00930
Glycine max
GLYMA05G00930
I
0.872
AMTR_s00058p00136280
Amborella trichopoda
AMTR_s00058p00136280
I
0.872
LPERR06G12840
Leersia perrieri
LPERR06G12840
I
0.872
BGIOSGA022861
Oryza indica
BGIOSGA022861
I
0.871
ORGLA06G0124600
Oryza glaberrima
ORGLA06G0124600
I
0.871
OBART06G13940
Oryza barthii
OBART06G13940
I
0.871
OPUNC06G13130
Oryza punctata
OPUNC06G13130
I
0.871
OGLUM06G14810
Oryza glumaepatula
OGLUM06G14810
I
0.871
ONIVA03G33370
Oryza nivara
ONIVA03G33370
I
0.871
OLONG_019251
Oryza longistaminata
OLONG_019251
I
0.871
OB06G22100
Oryza brachyantha
OB06G22100
I
0.871
ORUFI06G14810
Oryza rufipogon
ORUFI06G14810
I
0.871
GLYMA13G05540
Glycine max
GLYMA13G05540
I
0.871
e_gw1.327.11.1
Physcomitrella patens
e_gw1.327.11.1
D
0.871
GSMUA_Achr10G22350_001
Musa acuminata
GSMUA_Achr10G22350_001
I
0.871
OS06G0344900
Oryza sativa
OS06G0344900
I
0.871
GSMUA_Achr9G10040_001
Musa acuminata
GSMUA_Achr9G10040_001
I
0.871
Carubv10017737m.g
Capsella rubella
Carubv10017737m.g
I
0.871