CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI5G12407
(
Brachypodium distachyon
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
BRADI5G12407
T292798_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
e_gw1.288.15.1
M02381_2.00
Physcomitrella patens
NNNBAMKNHW
WDNMKTVNNN
PBM
Weirauch et al.(2014)
pTH8467
0.889
0.728
NAC098
M07239_2.00
Arabidopsis thaliana
CKTGTNNNDYAMGYHA
TDRCKTRHNNNACAMG
Dap-seq
OMalley et al.(2016)
CUC2_colamp_a
0.888
0.781
NAC098
M07240_2.00
Arabidopsis thaliana
NNNTWNCKTGHNNHWCAMG
CKTGWDNNDCAMGNWANNN
Dap-seq
OMalley et al.(2016)
CUC2_col
0.888
0.781
NAC100
M02375_2.00
Arabidopsis thaliana
NBAMKNHWNN
NNWDNMKTVN
PBM
Weirauch et al.(2014)
pTH7239
0.886
0.781
ANAC100
M02377_2.00
Arabidopsis lyrata
DYACGYHANN
NNTDRCGTRH
PBM
Weirauch et al.(2014)
pTH9234
0.884
0.781
NAC079
M02373_2.00
Arabidopsis thaliana
TTGCGTRY
RYACGCAA
PBM
Weirauch et al.(2014)
pTH7399
0.878
0.763
NAC079
M07228_2.00
Arabidopsis thaliana
CBWNHNNHACACGYWA
TWRCGTGTDNNDNWVG
Dap-seq
OMalley et al.(2016)
ANAC079_colamp_a
0.878
0.763
NAC079
M07229_2.00
Arabidopsis thaliana
NTWNCKTVHNNHWCAMGYWAH
DTWRCKTGWDNNDBAMGNWAN
Dap-seq
OMalley et al.(2016)
ANAC079_col
0.878
0.763
ANAC080
M02376_2.00
Arabidopsis lyrata
NBAMKNHWNN
NNWDNMKTVN
PBM
Weirauch et al.(2014)
pTH9230
0.877
0.772
NAC59
M11080_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANAC059_01
0.872
0.754
e_gw1.159.34.1
M02379_2.00
Physcomitrella patens
DYACGNHANN
NNTDNCGTRH
PBM
Weirauch et al.(2014)
pTH8477
0.872
0.728
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI5G12407.1
NAC/NAM
4
129
PPGFRFHPTDEELITHYLAKKVADARFTAFAVSEADLNKCEPWDLPSLARMGEKEWYFFCLKDRKYPTGLRTNRATESGYWKATGKDKDIFRGKGTLVGMKKTLVFYTGRAPKGEKSGWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Brachypodium distachyon
TFs
159 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OB04G22290
Oryza brachyantha
OB04G22290
I
0.954
OPUNC04G12870
Oryza punctata
OPUNC04G12870
I
0.946
Pavir.J23199
Panicum virgatum
Pavir.J23199
I
0.936
LPERR04G11740
Leersia perrieri
LPERR04G11740
I
0.934
OBART04G14970
Oryza barthii
OBART04G14970
I
0.928
ONIVA04G13100
Oryza nivara
ONIVA04G13100
I
0.928
OGLUM04G14830
Oryza glumaepatula
OGLUM04G14830
I
0.928
ORGLA04G0119700
Oryza glaberrima
ORGLA04G0119700
I
0.928
OS04G0460600
Oryza sativa
OS04G0460600
I
0.928
ORUFI04G16370
Oryza rufipogon
ORUFI04G16370
I
0.928
BGIOSGA016546
Oryza indica
BGIOSGA016546
I
0.928
Si010553m.g
Setaria italica
Si010553m.g
I
0.924
Sb06g019010
Sorghum bicolor
Sb06g019010
I
0.924
GRMZM2G009892
Zea mays
GRMZM2G009892
I
0.920
Pavir.Gb01850
Panicum virgatum
Pavir.Gb01850
I
0.912
OLONG_008218
Oryza longistaminata
OLONG_008218
I
0.909
GSMUA_Achr10G22350_001
Musa acuminata
GSMUA_Achr10G22350_001
I
0.908
Aquca_002_00662
Aquilegia coerulea
Aquca_002_00662
I
0.907
AMTR_s00058p00136280
Amborella trichopoda
AMTR_s00058p00136280
I
0.902
Cla010484
Citrullus lanatus
Cla010484
I
0.902
Solyc07g062840.2
Solanum lycopersicum
Solyc07g062840.2
I
0.899
Gorai.007G079900
Gossypium raimondii
Gorai.007G079900
I
0.898
28649.m000212
Ricinus communis
28649.m000212
I
0.896
cassava1758.valid.m1
Manihot esculenta
cassava1758.valid.m1
I
0.896
POPTR_0011s11600
Populus trichocarpa
POPTR_0011s11600
I
0.895
PRUPE_ppa026810mg
Prunus persica
PRUPE_ppa026810mg
I
0.895
Pm011397
Prunus mume
Pm011397
I
0.895
cassava44869.m1
Manihot esculenta
cassava44869.m1
I
0.895
orange1.1g047710m.g
Citrus sinensis
orange1.1g047710m.g
I
0.895
SapurV1A.1325s0010
Salix purpurea
SapurV1A.1325s0010
I
0.895
SapurV1A.2059s0010
Salix purpurea
SapurV1A.2059s0010
I
0.895
MDP0000310981
Malus domestica
MDP0000310981
I
0.895
Gorai.002G067300
Gossypium raimondii
Gorai.002G067300
I
0.895
Ciclev10008619m.g
Citrus clementina
Ciclev10008619m.g
I
0.895
evm.TU.supercontig_131.88
Carica papaya
evm.TU.supercontig_131.88
I
0.895
27950.m000105
Ricinus communis
27950.m000105
I
0.895
TCM_031619
Theobroma cacao
TCM_031619
I
0.895
GLYMA09G37050
Glycine max
GLYMA09G37050
I
0.895
GLYMA18G49620
Glycine max
GLYMA18G49620
I
0.894
cassava361.valid.m1
Manihot esculenta
cassava361.valid.m1
I
0.894
e_gw1.227.43.1
Physcomitrella patens
e_gw1.227.43.1
I
0.893
cassava1757.valid.m1
Manihot esculenta
cassava1757.valid.m1
I
0.893
Lus10041924.g
Linum usitatissimum
Lus10041924.g
I
0.892
Lus10005537.g
Linum usitatissimum
Lus10005537.g
I
0.892
chr4.CM0087.800.nd
Lotus japonicus
chr4.CM0087.800.nd
I
0.891
Gorai.013G171300
Gossypium raimondii
Gorai.013G171300
I
0.891
estExt_gwp_gw1.C_460173
Physcomitrella patens
estExt_gwp_gw1.C_460173
I
0.891
GLYMA05G00930
Glycine max
GLYMA05G00930
I
0.890
MTR_2g078700
Medicago truncatula
MTR_2g078700
I
0.890
Thhalv10004550m.g
Eutrema salsugineum
Thhalv10004550m.g
I
0.889
e_gw1.288.15.1
Physcomitrella patens
e_gw1.288.15.1
D
0.889
NAC098
Arabidopsis thaliana
AT5G53950
D
0.888
CUC2
Arabidopsis lyrata
Al_scaffold_0008_1815
I
0.888
Bostr.26833s0880
Boechera stricta
Bostr.26833s0880
I
0.888
Cagra.4622s0005
Capsella grandiflora
Cagra.4622s0005
I
0.888
Carubv10028330m.g
Capsella rubella
Carubv10028330m.g
I
0.888
gene04424-v1.0-hybrid
Fragaria vesca
gene04424-v1.0-hybrid
I
0.888
Bo9g113820
Brassica oleracea
Bo9g113820
I
0.888
Thhalv10013863m.g
Eutrema salsugineum
Thhalv10013863m.g
I
0.888
orange1.1g018950m.g
Citrus sinensis
orange1.1g018950m.g
I
0.887
Ciclev10012093m.g
Citrus clementina
Ciclev10012093m.g
I
0.887
MDP0000135860
Malus domestica
MDP0000135860
I
0.887
MDP0000232050
Malus domestica
MDP0000232050
I
0.887
MDP0000129335
Malus domestica
MDP0000129335
I
0.887
VIT_19s0014g02200
Vitis vinifera
VIT_19s0014g02200
I
0.886
OPUNC02G19580
Oryza punctata
OPUNC02G19580
I
0.886
NAC100
Arabidopsis thaliana
AT5G61430
D
0.886
Ca_22532
Cicer arietinum
Ca_22532
I
0.886
Aquca_033_00035
Aquilegia coerulea
Aquca_033_00035
I
0.886
AMTR_s00010p00266320
Amborella trichopoda
AMTR_s00010p00266320
I
0.885
gene00971-v1.0-hybrid
Fragaria vesca
gene00971-v1.0-hybrid
I
0.885
Eucgr.B00529
Eucalyptus grandis
Eucgr.B00529
I
0.885
Bo7g098620
Brassica oleracea
Bo7g098620
I
0.884
Cucsa.122890
Cucumis sativus
Cucsa.122890
I
0.884
mgf003818m
Mimulus guttatus
mgf003818m
I
0.884
Carubv10017737m.g
Capsella rubella
Carubv10017737m.g
I
0.884
Cagra.0542s0037
Capsella grandiflora
Cagra.0542s0037
I
0.884
Bra029313
Brassica rapa
Bra029313
I
0.884
Carubv10026752m.g
Capsella rubella
Carubv10026752m.g
I
0.884
ANAC100
Arabidopsis lyrata
fgenesh2_kg.8__2118__AT5G61430.1
D
0.884
Cla017258
Citrullus lanatus
Cla017258
I
0.884
Bra012960
Brassica rapa
Bra012960
I
0.884
LPERR06G12840
Leersia perrieri
LPERR06G12840
I
0.883
OB06G22100
Oryza brachyantha
OB06G22100
I
0.882
LjSGA_071377.1
Lotus japonicus
LjSGA_071377.1
I
0.882
GRMZM2G386163
Zea mays
GRMZM2G386163
I
0.882
TRIUR3_09915
Triticum urartu
TRIUR3_09915
N
0.882
GLYMA06G35660
Glycine max
GLYMA06G35660
I
0.882
chr3.CM0282.730.nc
Lotus japonicus
chr3.CM0282.730.nc
I
0.882
OGLUM06G14810
Oryza glumaepatula
OGLUM06G14810
I
0.882
ORGLA06G0124600
Oryza glaberrima
ORGLA06G0124600
I
0.882
ORUFI06G14810
Oryza rufipogon
ORUFI06G14810
I
0.882
OLONG_019251
Oryza longistaminata
OLONG_019251
I
0.882
OPUNC06G13130
Oryza punctata
OPUNC06G13130
I
0.882
BGIOSGA022861
Oryza indica
BGIOSGA022861
I
0.882
OS06G0344900
Oryza sativa
OS06G0344900
I
0.882
F775_32832
Aegilops tauschii
F775_32832
N
0.882
Traes_2BL_6AEE8AC28
Triticum aestivum
Traes_2BL_6AEE8AC28
N
0.882
OBART06G13940
Oryza barthii
OBART06G13940
I
0.882
GLYMA12G26190
Glycine max
GLYMA12G26190
I
0.882
ONIVA03G33370
Oryza nivara
ONIVA03G33370
I
0.882
Traes_2DL_DF7B995C9
Triticum aestivum
Traes_2DL_DF7B995C9
N
0.882
Cla023717
Citrullus lanatus
Cla023717
I
0.881
GLYMA17G10970
Glycine max
GLYMA17G10970
I
0.880
Bostr.13129s0198
Boechera stricta
Bostr.13129s0198
I
0.880
Gorai.007G323900
Gossypium raimondii
Gorai.007G323900
I
0.880
Traes_2AL_57BF37A86
Triticum aestivum
Traes_2AL_57BF37A86
N
0.880
Bostr.26833s0095
Boechera stricta
Bostr.26833s0095
I
0.880
POPTR_0001s40680
Populus trichocarpa
POPTR_0001s40680
I
0.879
Bo2g161570
Brassica oleracea
Bo2g161570
I
0.879
SapurV1A.0207s0120
Salix purpurea
SapurV1A.0207s0120
I
0.879
Gorai.008G194400
Gossypium raimondii
Gorai.008G194400
I
0.878
Thhalv10014081m.g
Eutrema salsugineum
Thhalv10014081m.g
I
0.878
Carubv10001372m.g
Capsella rubella
Carubv10001372m.g
I
0.878
NAC079
Arabidopsis thaliana
AT5G07680
D
0.878
GLYMA06G21020
Glycine max
GLYMA06G21020
I
0.878
Cagra.2925s0018
Capsella grandiflora
Cagra.2925s0018
I
0.878
TCM_018621
Theobroma cacao
TCM_018621
I
0.877
PRUPE_ppa007653mg
Prunus persica
PRUPE_ppa007653mg
I
0.877
ANAC080
Arabidopsis lyrata
fgenesh2_kg.6__736__AT5G07680.1
D
0.877
TCM_014073
Theobroma cacao
TCM_014073
I
0.876
Ca_22370
Cicer arietinum
Ca_22370
I
0.876
Bo6g062160
Brassica oleracea
Bo6g062160
I
0.875
GLYMA13G05540
Glycine max
GLYMA13G05540
I
0.875
VIT_14s0108g01070
Vitis vinifera
VIT_14s0108g01070
I
0.874
Cucsa.338700
Cucumis sativus
Cucsa.338700
I
0.874
ORGLA09G0117400
Oryza glaberrima
ORGLA09G0117400
I
0.873
OPUNC09G13640
Oryza punctata
OPUNC09G13640
I
0.873
OLONG_009674
Oryza longistaminata
OLONG_009674
I
0.873
OGLUM09G15820
Oryza glumaepatula
OGLUM09G15820
I
0.873
Bo00578s090
Brassica oleracea
Bo00578s090
I
0.873
BGIOSGA029508
Oryza indica
BGIOSGA029508
I
0.873
Pavir.J02772
Panicum virgatum
Pavir.J02772
I
0.873
OMERI07G04410
Oryza meridionalis
OMERI07G04410
I
0.873
ONIVA09G15800
Oryza nivara
ONIVA09G15800
I
0.873
GLYMA13G34950
Glycine max
GLYMA13G34950
I
0.873
PK13860.1
Cannabis sativa
PK13860.1
I
0.873
Sb02g028870
Sorghum bicolor
Sb02g028870
I
0.873
GLYMA12G35530
Glycine max
GLYMA12G35530
I
0.873
Si030187m.g
Setaria italica
Si030187m.g
I
0.873
Bra025658
Brassica rapa
Bra025658
I
0.873
OBART09G15220
Oryza barthii
OBART09G15220
I
0.873
ORUFI09G16430
Oryza rufipogon
ORUFI09G16430
I
0.873
PDK_20s1323531g003
Phoenix dactylifera
PDK_20s1323531g003
I
0.873
OS09G0497900
Oryza sativa
OS09G0497900
I
0.873
LPERR09G11330
Leersia perrieri
LPERR09G11330
I
0.873
MTR_3g435150
Medicago truncatula
MTR_3g435150
I
0.872
Thhalv10027874m.g
Eutrema salsugineum
Thhalv10027874m.g
I
0.872
Bra028435
Brassica rapa
Bra028435
I
0.872
PRUPE_ppa007883mg
Prunus persica
PRUPE_ppa007883mg
I
0.872
e_gw1.159.34.1
Physcomitrella patens
e_gw1.159.34.1
D
0.872
Bra009246
Brassica rapa
Bra009246
I
0.872
NAC59
Arabidopsis thaliana
AT3G29035
D
0.872
Gorai.007G038100
Gossypium raimondii
Gorai.007G038100
I
0.872
Bo2g043280
Brassica oleracea
Bo2g043280
I
0.871
TRIUR3_20591
Triticum urartu
TRIUR3_20591
I
0.871
MLOC_68185
Hordeum vulgare
MLOC_68185
I
0.871
Bra022685
Brassica rapa
Bra022685
I
0.871
F775_52293
Aegilops tauschii
F775_52293
I
0.871