e_gw1.327.11.1 (Physcomitrella patens)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 e_gw1.327.11.1 T297040_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.327.11.1
M02382_2.00		 Physcomitrella patens
NTTDYRTWWN
NWWAYRHAAN		 PBM
Weirauch et al.(2014)
pTH8478		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.288.15.1
M02381_2.00 		Physcomitrella patens
NNNBAMKNHW
WDNMKTVNNN		 PBM
Weirauch et al.(2014)
pTH8467 		0.938 0.798
e_gw1.159.34.1
M02379_2.00 		Physcomitrella patens
DYACGNHANN
NNTDNCGTRH		 PBM
Weirauch et al.(2014)
pTH8477 		0.925 0.825
e_gw1.279.28.1
M02380_2.00 		Physcomitrella patens
NNNTTGHKTDY
RHAMDCAANNN		 PBM
Weirauch et al.(2014)
pTH8466 		0.906 0.798
NAC098
M07239_2.00 		Arabidopsis thaliana
CKTGTNNNDYAMGYHA
TDRCKTRHNNNACAMG		 Dap-seq
OMalley et al.(2016)
CUC2_colamp_a 		0.900 0.737
NAC098
M07240_2.00 		Arabidopsis thaliana
NNNTWNCKTGHNNHWCAMG
CKTGWDNNDCAMGNWANNN		 Dap-seq
OMalley et al.(2016)
CUC2_col 		0.900 0.737
NAC079
M02373_2.00 		Arabidopsis thaliana
TTGCGTRY
RYACGCAA		 PBM
Weirauch et al.(2014)
pTH7399 		0.881 0.719
NAC079
M07228_2.00 		Arabidopsis thaliana
CBWNHNNHACACGYWA
TWRCGTGTDNNDNWVG		 Dap-seq
OMalley et al.(2016)
ANAC079_colamp_a 		0.881 0.719
NAC079
M07229_2.00 		Arabidopsis thaliana
NTWNCKTVHNNHWCAMGYWAH
DTWRCKTGWDNNDBAMGNWAN		 Dap-seq
OMalley et al.(2016)
ANAC079_col 		0.881 0.719
ANAC080
M02376_2.00 		Arabidopsis lyrata
NBAMKNHWNN
NNWDNMKTVN		 PBM
Weirauch et al.(2014)
pTH9230 		0.881 0.711
NAC100
M02375_2.00 		Arabidopsis thaliana
NBAMKNHWNN
NNWDNMKTVN		 PBM
Weirauch et al.(2014)
pTH7239 		0.874 0.711
For this family, TFs with SR scores > 0.870 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02382_2.00 NAC/NAM 4 130

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.327.11.1 NAC/NAM 4 130

Links

Other NAC/NAM family TFs
Other Physcomitrella patens TFs

173 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
e_gw1.288.15.1 Physcomitrella patens e_gw1.288.15.1 D 0.938
e_gw1.227.43.1 Physcomitrella patens e_gw1.227.43.1 I 0.926
e_gw1.159.34.1 Physcomitrella patens e_gw1.159.34.1 D 0.925
estExt_gwp_gw1.C_460173 Physcomitrella patens estExt_gwp_gw1.C_460173 I 0.923
TCM_031619 Theobroma cacao TCM_031619 I 0.914
27950.m000105 Ricinus communis 27950.m000105 I 0.914
evm.TU.supercontig_131.88 Carica papaya evm.TU.supercontig_131.88 I 0.914
Lus10005537.g Linum usitatissimum Lus10005537.g I 0.914
Gorai.002G067300 Gossypium raimondii Gorai.002G067300 I 0.914
Lus10041924.g Linum usitatissimum Lus10041924.g I 0.914
OGLUM06G14810 Oryza glumaepatula OGLUM06G14810 I 0.913
OLONG_019251 Oryza longistaminata OLONG_019251 I 0.913
ONIVA03G33370 Oryza nivara ONIVA03G33370 I 0.913
OPUNC06G13130 Oryza punctata OPUNC06G13130 I 0.913
OBART06G13940 Oryza barthii OBART06G13940 I 0.913
OS06G0344900 Oryza sativa OS06G0344900 I 0.913
LPERR06G12840 Leersia perrieri LPERR06G12840 I 0.913
OB06G22100 Oryza brachyantha OB06G22100 I 0.913
BGIOSGA022861 Oryza indica BGIOSGA022861 I 0.913
ORGLA06G0124600 Oryza glaberrima ORGLA06G0124600 I 0.913
ORUFI06G14810 Oryza rufipogon ORUFI06G14810 I 0.913
cassava44869.m1 Manihot esculenta cassava44869.m1 I 0.910
MDP0000135860 Malus domestica MDP0000135860 I 0.910
Pm011397 Prunus mume Pm011397 I 0.910
PRUPE_ppa026810mg Prunus persica PRUPE_ppa026810mg I 0.910
MDP0000310981 Malus domestica MDP0000310981 I 0.910
GRMZM2G386163 Zea mays GRMZM2G386163 I 0.908
Solyc07g062840.2 Solanum lycopersicum Solyc07g062840.2 I 0.906
Si030187m.g Setaria italica Si030187m.g I 0.906
LPERR09G11330 Leersia perrieri LPERR09G11330 I 0.906
Sb02g028870 Sorghum bicolor Sb02g028870 I 0.906
OS09G0497900 Oryza sativa OS09G0497900 I 0.906
ORUFI09G16430 Oryza rufipogon ORUFI09G16430 I 0.906
OBART09G15220 Oryza barthii OBART09G15220 I 0.906
OGLUM09G15820 Oryza glumaepatula OGLUM09G15820 I 0.906
OLONG_009674 Oryza longistaminata OLONG_009674 I 0.906
OMERI07G04410 Oryza meridionalis OMERI07G04410 I 0.906
ONIVA09G15800 Oryza nivara ONIVA09G15800 I 0.906
OPUNC09G13640 Oryza punctata OPUNC09G13640 I 0.906
ORGLA09G0117400 Oryza glaberrima ORGLA09G0117400 I 0.906
e_gw1.279.28.1 Physcomitrella patens e_gw1.279.28.1 D 0.906
BGIOSGA029508 Oryza indica BGIOSGA029508 I 0.906
Pavir.J02772 Panicum virgatum Pavir.J02772 I 0.906
SapurV1A.2059s0010 Salix purpurea SapurV1A.2059s0010 I 0.905
SapurV1A.1325s0010 Salix purpurea SapurV1A.1325s0010 I 0.905
e_gw1.164.23.1 Physcomitrella patens e_gw1.164.23.1 I 0.905
POPTR_0011s11600 Populus trichocarpa POPTR_0011s11600 I 0.905
Bo9g113820 Brassica oleracea Bo9g113820 I 0.904
Thhalv10013863m.g Eutrema salsugineum Thhalv10013863m.g I 0.904
AMTR_s00022p00160350 Amborella trichopoda AMTR_s00022p00160350 I 0.904
AMTR_s00058p00136280 Amborella trichopoda AMTR_s00058p00136280 I 0.904
Gorai.013G171300 Gossypium raimondii Gorai.013G171300 I 0.904
orange1.1g047710m.g Citrus sinensis orange1.1g047710m.g I 0.903
Ciclev10008619m.g Citrus clementina Ciclev10008619m.g I 0.903
Cagra.4622s0005 Capsella grandiflora Cagra.4622s0005 I 0.900
Carubv10028330m.g Capsella rubella Carubv10028330m.g I 0.900
Bostr.26833s0880 Boechera stricta Bostr.26833s0880 I 0.900
NAC098 Arabidopsis thaliana AT5G53950 D 0.900
CUC2 Arabidopsis lyrata Al_scaffold_0008_1815 I 0.900
MTR_2g078700 Medicago truncatula MTR_2g078700 I 0.899
Bo2g008760 Brassica oleracea Bo2g008760 I 0.898
AMTR_s00010p00266320 Amborella trichopoda AMTR_s00010p00266320 I 0.898
Ca_22532 Cicer arietinum Ca_22532 I 0.897
Aquca_033_00035 Aquilegia coerulea Aquca_033_00035 I 0.897
gene00971-v1.0-hybrid Fragaria vesca gene00971-v1.0-hybrid I 0.896
Bo2g043280 Brassica oleracea Bo2g043280 I 0.895
Bra022685 Brassica rapa Bra022685 I 0.895
Cucsa.122890 Cucumis sativus Cucsa.122890 I 0.894
Cla023717 Citrullus lanatus Cla023717 I 0.894
Gorai.007G323900 Gossypium raimondii Gorai.007G323900 I 0.894
VIT_19s0014g02200 Vitis vinifera VIT_19s0014g02200 I 0.894
OPUNC04G12870 Oryza punctata OPUNC04G12870 I 0.894
GLYMA06G35660 Glycine max GLYMA06G35660 I 0.893
OLONG_008218 Oryza longistaminata OLONG_008218 I 0.893
orange1.1g018950m.g Citrus sinensis orange1.1g018950m.g I 0.893
Ciclev10012093m.g Citrus clementina Ciclev10012093m.g I 0.893
GLYMA12G26190 Glycine max GLYMA12G26190 I 0.893
LjSGA_071377.1 Lotus japonicus LjSGA_071377.1 I 0.891
GSMUA_Achr10G22350_001 Musa acuminata GSMUA_Achr10G22350_001 I 0.891
Si007886m.g Setaria italica Si007886m.g I 0.890
Eucgr.B00529 Eucalyptus grandis Eucgr.B00529 I 0.890
Pavir.J00978 Panicum virgatum Pavir.J00978 I 0.890
Sb08g006330 Sorghum bicolor Sb08g006330 I 0.890
GRMZM2G393433 Zea mays GRMZM2G393433 I 0.890
BRADI4G34157 Brachypodium distachyon BRADI4G34157 I 0.889
GSMUA_Achr8G24680_001 Musa acuminata GSMUA_Achr8G24680_001 I 0.889
Cla012339 Citrullus lanatus Cla012339 I 0.889
GLYMA13G05540 Glycine max GLYMA13G05540 I 0.888
chr3.CM0282.730.nc Lotus japonicus chr3.CM0282.730.nc I 0.887
ONIVA04G13100 Oryza nivara ONIVA04G13100 I 0.886
ORUFI04G16370 Oryza rufipogon ORUFI04G16370 I 0.886
ORGLA04G0119700 Oryza glaberrima ORGLA04G0119700 I 0.886
Ca_22370 Cicer arietinum Ca_22370 I 0.886
OBART04G14970 Oryza barthii OBART04G14970 I 0.886
OS04G0460600 Oryza sativa OS04G0460600 I 0.886
Pavir.J23199 Panicum virgatum Pavir.J23199 I 0.886
OGLUM04G14830 Oryza glumaepatula OGLUM04G14830 I 0.886
BGIOSGA016546 Oryza indica BGIOSGA016546 I 0.886
chr4.CM0087.800.nd Lotus japonicus chr4.CM0087.800.nd I 0.886
PDK_20s1323531g003 Phoenix dactylifera PDK_20s1323531g003 I 0.885
MLOC_68185 Hordeum vulgare MLOC_68185 I 0.885
Bra009246 Brassica rapa Bra009246 I 0.885
TRIUR3_20591 Triticum urartu TRIUR3_20591 I 0.885
F775_52293 Aegilops tauschii F775_52293 I 0.885
Aquca_002_00662 Aquilegia coerulea Aquca_002_00662 I 0.884
Si010553m.g Setaria italica Si010553m.g I 0.884
Bostr.13129s0198 Boechera stricta Bostr.13129s0198 I 0.883
GLYMA13G34950 Glycine max GLYMA13G34950 I 0.882
GLYMA06G21020 Glycine max GLYMA06G21020 I 0.882
PRUPE_ppa007653mg Prunus persica PRUPE_ppa007653mg I 0.882
GLYMA12G35530 Glycine max GLYMA12G35530 I 0.882
ANAC080 Arabidopsis lyrata fgenesh2_kg.6__736__AT5G07680.1 D 0.881
Carubv10001372m.g Capsella rubella Carubv10001372m.g I 0.881
Eucgr.F03588 Eucalyptus grandis Eucgr.F03588 I 0.881
SELMODRAFT_95019 Selaginella moellendorffii SELMODRAFT_95019 I 0.881
Cagra.2925s0018 Capsella grandiflora Cagra.2925s0018 I 0.881
NAC079 Arabidopsis thaliana AT5G07680 D 0.881
Thhalv10014081m.g Eutrema salsugineum Thhalv10014081m.g I 0.881
SELMODRAFT_67245 Selaginella moellendorffii SELMODRAFT_67245 I 0.881
SELMODRAFT_71303 Selaginella moellendorffii SELMODRAFT_71303 I 0.881
Bostr.26833s0095 Boechera stricta Bostr.26833s0095 I 0.881
POPTR_0001s40680 Populus trichocarpa POPTR_0001s40680 I 0.880
SapurV1A.0207s0120 Salix purpurea SapurV1A.0207s0120 I 0.880
GLYMA17G10970 Glycine max GLYMA17G10970 I 0.880
Gorai.009G186000 Gossypium raimondii Gorai.009G186000 I 0.880
GLYMA05G00930 Glycine max GLYMA05G00930 I 0.880
GLYMA04G33270 Glycine max GLYMA04G33270 I 0.879
SELMODRAFT_77371 Selaginella moellendorffii SELMODRAFT_77371 I 0.879
Pm024887 Prunus mume Pm024887 I 0.879
mgf003818m Mimulus guttatus mgf003818m I 0.879
GRMZM2G008374 Zea mays GRMZM2G008374 I 0.878
Eucgr.I01958 Eucalyptus grandis Eucgr.I01958 I 0.878
cassava41252.m1 Manihot esculenta cassava41252.m1 I 0.878
GSMUA_Achr9G20090_001 Musa acuminata GSMUA_Achr9G20090_001 I 0.877
TCM_034835 Theobroma cacao TCM_034835 I 0.877
30170.m014236 Ricinus communis 30170.m014236 I 0.877
Bra028685 Brassica rapa Bra028685 I 0.877
Gorai.007G079900 Gossypium raimondii Gorai.007G079900 I 0.876
cassava361.valid.m1 Manihot esculenta cassava361.valid.m1 I 0.876
Gorai.008G194400 Gossypium raimondii Gorai.008G194400 I 0.876
GSMUA_Achr6G01770_001 Musa acuminata GSMUA_Achr6G01770_001 I 0.876
gene04424-v1.0-hybrid Fragaria vesca gene04424-v1.0-hybrid I 0.876
orange1.1g016283m.g Citrus sinensis orange1.1g016283m.g I 0.875
evm.TU.supercontig_286.12 Carica papaya evm.TU.supercontig_286.12 I 0.875
GLYMA09G37050 Glycine max GLYMA09G37050 I 0.875
Ciclev10001403m.g Citrus clementina Ciclev10001403m.g I 0.875
Thhalv10004550m.g Eutrema salsugineum Thhalv10004550m.g I 0.875
NAC100 Arabidopsis thaliana AT5G61430 D 0.874
cassava1758.valid.m1 Manihot esculenta cassava1758.valid.m1 I 0.874
PK13860.1 Cannabis sativa PK13860.1 I 0.874
Bo6g062160 Brassica oleracea Bo6g062160 I 0.874
28649.m000212 Ricinus communis 28649.m000212 I 0.874
LPERR04G11740 Leersia perrieri LPERR04G11740 I 0.874
Bo00578s090 Brassica oleracea Bo00578s090 I 0.873
SapurV1A.0266s0070 Salix purpurea SapurV1A.0266s0070 I 0.873
OGLUM08G21360 Oryza glumaepatula OGLUM08G21360 I 0.873
CUC3 Vitis vinifera VIT_18s0122g00800 I 0.873
ORUFI08G22550 Oryza rufipogon ORUFI08G22550 I 0.873
OS08G0511200 Oryza sativa OS08G0511200 I 0.873
cassava21580.m1 Manihot esculenta cassava21580.m1 I 0.873
Cucsa.112890 Cucumis sativus Cucsa.112890 I 0.873
Bra025658 Brassica rapa Bra025658 I 0.873
ORGLA08G0177600 Oryza glaberrima ORGLA08G0177600 I 0.873
Bra003023 Brassica rapa Bra003023 I 0.873
POPTR_0002s00730 Populus trichocarpa POPTR_0002s00730 I 0.873
POPTR_0005s27720 Populus trichocarpa POPTR_0005s27720 I 0.873
Thhalv10019493m.g Eutrema salsugineum Thhalv10019493m.g I 0.872
Cucsa.002980 Cucumis sativus Cucsa.002980 I 0.872
OB04G22290 Oryza brachyantha OB04G22290 I 0.872
GRMZM2G139700 Zea mays GRMZM2G139700 I 0.872
MLOC_13932 Hordeum vulgare MLOC_13932 I 0.871
Sb06g019010 Sorghum bicolor Sb06g019010 I 0.871
Cla017258 Citrullus lanatus Cla017258 I 0.871