CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SELMODRAFT_67245
(
Selaginella moellendorffii
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
SELMODRAFT_67245
T295654_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
e_gw1.288.15.1
M02381_2.00
Physcomitrella patens
NNNBAMKNHW
WDNMKTVNNN
PBM
Weirauch et al.(2014)
pTH8467
0.910
0.789
ANAC038
M07188_2.00
Arabidopsis thaliana
DNCKTRHNNHDCAMGYWA
TWRCKTGHDNNDYAMGNH
Dap-seq
OMalley et al.(2016)
ANAC038_col_a
0.891
0.719
ANAC038
M07189_2.00
Arabidopsis thaliana
TTDCTTGWNNHDYAMGHHAHH
DDTDDCKTRHDNNWCAAGHAA
Dap-seq
OMalley et al.(2016)
ANAC038_colamp_a
0.891
0.719
e_gw1.327.11.1
M02382_2.00
Physcomitrella patens
NTTDYRTWWN
NWWAYRHAAN
PBM
Weirauch et al.(2014)
pTH8478
0.881
0.754
NAC054
M07205_2.00
Arabidopsis thaliana
CKTVHNNHRCACGYHANCW
WGNTDRCGTGYDNNDBAMG
Dap-seq
OMalley et al.(2016)
CUC1_colamp_a
0.881
0.772
NAC054
M07206_2.00
Arabidopsis thaliana
TWNCKTGHNNNDCAMG
CKTGHNNNDCAMGNWA
Dap-seq
OMalley et al.(2016)
CUC1_col_v31
0.881
0.772
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFJ32111
NAC/NAM
2
136
PPGFRFHPTDEELIDCYLIKKVENNKFSVRAIQDVDLNKNEPWELPDKAKMGEKEWYFFTLRDRKYPTGMRTNRATEAGYWKATGKDRDITRTSANSTTNSSSNTLVGAKKTLVFYRGRAPKGVKTNWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Selaginella moellendorffii
TFs
173 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SELMODRAFT_71303
Selaginella moellendorffii
SELMODRAFT_71303
I
0.974
Cla019391
Citrullus lanatus
Cla019391
I
0.930
Cucsa.197830
Cucumis sativus
Cucsa.197830
I
0.929
MTR_4g108760
Medicago truncatula
MTR_4g108760
I
0.917
estExt_gwp_gw1.C_460173
Physcomitrella patens
estExt_gwp_gw1.C_460173
I
0.916
Ca_22532
Cicer arietinum
Ca_22532
I
0.915
orange1.1g017827m.g
Citrus sinensis
orange1.1g017827m.g
I
0.914
Ciclev10020480m.g
Citrus clementina
Ciclev10020480m.g
I
0.914
Aquca_033_00035
Aquilegia coerulea
Aquca_033_00035
I
0.914
gene26043-v1.0-hybrid
Fragaria vesca
gene26043-v1.0-hybrid
I
0.914
Bra003023
Brassica rapa
Bra003023
I
0.913
gene00971-v1.0-hybrid
Fragaria vesca
gene00971-v1.0-hybrid
I
0.913
Bo4g154590
Brassica oleracea
Bo4g154590
I
0.912
e_gw1.288.15.1
Physcomitrella patens
e_gw1.288.15.1
D
0.910
POPTR_0012s01610
Populus trichocarpa
POPTR_0012s01610
I
0.910
SapurV1A.0377s0130
Salix purpurea
SapurV1A.0377s0130
I
0.910
30138.m004055
Ricinus communis
30138.m004055
I
0.908
cassava17517.valid.m1
Manihot esculenta
cassava17517.valid.m1
I
0.908
e_gw1.227.43.1
Physcomitrella patens
e_gw1.227.43.1
I
0.908
GLYMA12G35530
Glycine max
GLYMA12G35530
I
0.907
GLYMA13G34950
Glycine max
GLYMA13G34950
I
0.907
MTR_2g078700
Medicago truncatula
MTR_2g078700
I
0.905
Lus10021659.g
Linum usitatissimum
Lus10021659.g
I
0.903
VIT_19s0014g02200
Vitis vinifera
VIT_19s0014g02200
I
0.903
Lus10001648.g
Linum usitatissimum
Lus10001648.g
I
0.903
GLYMA12G26190
Glycine max
GLYMA12G26190
I
0.902
Cla023717
Citrullus lanatus
Cla023717
I
0.902
GLYMA06G35660
Glycine max
GLYMA06G35660
I
0.902
Cucsa.122890
Cucumis sativus
Cucsa.122890
I
0.901
POPTR_0015s02170
Populus trichocarpa
POPTR_0015s02170
I
0.901
LjSGA_071377.1
Lotus japonicus
LjSGA_071377.1
I
0.900
Lus10026966.g
Linum usitatissimum
Lus10026966.g
I
0.900
Bo1g117610
Brassica oleracea
Bo1g117610
I
0.900
Bra037585
Brassica rapa
Bra037585
I
0.900
PK02366.1
Cannabis sativa
PK02366.1
I
0.898
GLYMA06G08440
Glycine max
GLYMA06G08440
I
0.898
gene08765-v1.0-hybrid
Fragaria vesca
gene08765-v1.0-hybrid
I
0.897
Eucgr.C02105
Eucalyptus grandis
Eucgr.C02105
I
0.897
GLYMA04G08320
Glycine max
GLYMA04G08320
I
0.897
Thhalv10000520m.g
Eutrema salsugineum
Thhalv10000520m.g
I
0.897
Solyc03g115850.2
Solanum lycopersicum
Solyc03g115850.2
I
0.896
GSMUA_Achr7G19680_001
Musa acuminata
GSMUA_Achr7G19680_001
I
0.896
28226.m000851
Ricinus communis
28226.m000851
I
0.895
evm.TU.supercontig_244.7
Carica papaya
evm.TU.supercontig_244.7
I
0.895
POPTR_0001s40680
Populus trichocarpa
POPTR_0001s40680
I
0.894
SapurV1A.0207s0120
Salix purpurea
SapurV1A.0207s0120
I
0.894
cassava44869.m1
Manihot esculenta
cassava44869.m1
I
0.893
Pm011397
Prunus mume
Pm011397
I
0.893
chr3.CM0282.730.nc
Lotus japonicus
chr3.CM0282.730.nc
I
0.893
PRUPE_ppa026810mg
Prunus persica
PRUPE_ppa026810mg
I
0.893
Cucsa.161510
Cucumis sativus
Cucsa.161510
I
0.893
SapurV1A.1363s0020
Salix purpurea
SapurV1A.1363s0020
I
0.893
Lus10020165.g
Linum usitatissimum
Lus10020165.g
I
0.893
MDP0000310981
Malus domestica
MDP0000310981
I
0.893
SapurV1A.1285s0100
Salix purpurea
SapurV1A.1285s0100
I
0.893
Cla022572
Citrullus lanatus
Cla022572
I
0.893
POPTR_0018s03910
Populus trichocarpa
POPTR_0018s03910
I
0.893
GLYMA14G20276
Glycine max
GLYMA14G20276
I
0.893
MDP0000135860
Malus domestica
MDP0000135860
I
0.893
MTR_3g109340
Medicago truncatula
MTR_3g109340
I
0.892
mgf025158m
Mimulus guttatus
mgf025158m
I
0.892
POPTR_0006s29180
Populus trichocarpa
POPTR_0006s29180
I
0.892
PGSC0003DMG400019523
Solanum tuberosum
PGSC0003DMG400019523
I
0.892
Bra032095
Brassica rapa
Bra032095
I
0.891
ANAC039
Vitis vinifera
VIT_04s0008g02710
I
0.891
Bra007855
Brassica rapa
Bra007855
I
0.891
ANAC038
Arabidopsis thaliana
AT2G24430
D
0.891
Bo8g099810
Brassica oleracea
Bo8g099810
I
0.891
ANAC039
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_4000352
I
0.891
Bostr.27895s0039
Boechera stricta
Bostr.27895s0039
I
0.891
BRADI1G14467
Brachypodium distachyon
BRADI1G14467
I
0.891
Cagra.4091s0015
Capsella grandiflora
Cagra.4091s0015
I
0.891
MLOC_68284
Hordeum vulgare
MLOC_68284
I
0.891
Carubv10025508m.g
Capsella rubella
Carubv10025508m.g
I
0.891
Traes_4AL_B44DF4ACC
Triticum aestivum
Traes_4AL_B44DF4ACC
I
0.890
TCM_036791
Theobroma cacao
TCM_036791
I
0.890
Pm005091
Prunus mume
Pm005091
I
0.890
orange1.1g037591m.g
Citrus sinensis
orange1.1g037591m.g
I
0.890
cassava18338.valid.m1
Manihot esculenta
cassava18338.valid.m1
I
0.890
MDP0000232008
Malus domestica
MDP0000232008
I
0.890
F775_05949
Aegilops tauschii
F775_05949
I
0.890
PRUPE_ppa025916mg
Prunus persica
PRUPE_ppa025916mg
I
0.890
mgf003818m
Mimulus guttatus
mgf003818m
I
0.890
MDP0000690168
Malus domestica
MDP0000690168
I
0.890
TRIUR3_27612
Triticum urartu
TRIUR3_27612
I
0.890
Gorai.010G124100
Gossypium raimondii
Gorai.010G124100
I
0.890
Ciclev10008885m.g
Citrus clementina
Ciclev10008885m.g
I
0.890
PK26741.1
Cannabis sativa
PK26741.1
I
0.889
chr1.LjT35C22.60.nc
Lotus japonicus
chr1.LjT35C22.60.nc
I
0.889
cassava46147.m1
Manihot esculenta
cassava46147.m1
I
0.889
mgf021404m
Mimulus guttatus
mgf021404m
I
0.889
Aquca_018_00116
Aquilegia coerulea
Aquca_018_00116
I
0.889
Traes_4BS_373BDBA94
Triticum aestivum
Traes_4BS_373BDBA94
I
0.888
SapurV1A.0263s0310
Salix purpurea
SapurV1A.0263s0310
I
0.887
Gorai.007G323900
Gossypium raimondii
Gorai.007G323900
I
0.887
evm.TU.supercontig_131.88
Carica papaya
evm.TU.supercontig_131.88
I
0.887
PGSC0003DMG400033047
Solanum tuberosum
PGSC0003DMG400033047
I
0.887
27950.m000105
Ricinus communis
27950.m000105
I
0.887
Solyc06g069710.2
Solanum lycopersicum
Solyc06g069710.2
I
0.887
TCM_031619
Theobroma cacao
TCM_031619
I
0.887
Gorai.002G067300
Gossypium raimondii
Gorai.002G067300
I
0.887
GSMUA_Achr10G22350_001
Musa acuminata
GSMUA_Achr10G22350_001
I
0.886
Lus10041924.g
Linum usitatissimum
Lus10041924.g
I
0.886
Gorai.013G171300
Gossypium raimondii
Gorai.013G171300
I
0.886
Lus10005537.g
Linum usitatissimum
Lus10005537.g
I
0.886
AMTR_s00058p00136280
Amborella trichopoda
AMTR_s00058p00136280
I
0.886
POPTR_0011s11600
Populus trichocarpa
POPTR_0011s11600
I
0.882
SapurV1A.2059s0010
Salix purpurea
SapurV1A.2059s0010
I
0.882
SapurV1A.1325s0010
Salix purpurea
SapurV1A.1325s0010
I
0.882
mgf006090m
Mimulus guttatus
mgf006090m
I
0.881
Carubv10014276m.g
Capsella rubella
Carubv10014276m.g
I
0.881
Thhalv10021186m.g
Eutrema salsugineum
Thhalv10021186m.g
I
0.881
Cagra.0007s0060
Capsella grandiflora
Cagra.0007s0060
I
0.881
Bo3g066690
Brassica oleracea
Bo3g066690
I
0.881
Bra001586
Brassica rapa
Bra001586
I
0.881
Bostr.28625s0180
Boechera stricta
Bostr.28625s0180
I
0.881
CUC1
Arabidopsis lyrata
fgenesh2_kg.3__1650__AT3G15170.1
I
0.881
NAC054
Arabidopsis thaliana
AT3G15170
D
0.881
e_gw1.327.11.1
Physcomitrella patens
e_gw1.327.11.1
D
0.881
MDP0000276765
Malus domestica
MDP0000276765
I
0.879
Bra021592
Brassica rapa
Bra021592
I
0.879
Bo1g129730
Brassica oleracea
Bo1g129730
I
0.879
Solyc07g062840.2
Solanum lycopersicum
Solyc07g062840.2
I
0.879
TCM_018621
Theobroma cacao
TCM_018621
I
0.879
Si036535m.g
Setaria italica
Si036535m.g
I
0.878
Eucgr.I01958
Eucalyptus grandis
Eucgr.I01958
I
0.878
Bra022685
Brassica rapa
Bra022685
I
0.878
Lus10009669.g
Linum usitatissimum
Lus10009669.g
I
0.878
Bo2g043280
Brassica oleracea
Bo2g043280
I
0.878
Eucgr.B00529
Eucalyptus grandis
Eucgr.B00529
I
0.877
GLYMA17G10970
Glycine max
GLYMA17G10970
I
0.877
LPERR06G12840
Leersia perrieri
LPERR06G12840
I
0.877
GLYMA05G00930
Glycine max
GLYMA05G00930
I
0.877
OB06G22100
Oryza brachyantha
OB06G22100
I
0.876
OBART06G13940
Oryza barthii
OBART06G13940
I
0.876
ONIVA03G33370
Oryza nivara
ONIVA03G33370
I
0.876
ORUFI06G14810
Oryza rufipogon
ORUFI06G14810
I
0.876
BGIOSGA022861
Oryza indica
BGIOSGA022861
I
0.876
OS06G0344900
Oryza sativa
OS06G0344900
I
0.876
OGLUM06G14810
Oryza glumaepatula
OGLUM06G14810
I
0.876
ORGLA06G0124600
Oryza glaberrima
ORGLA06G0124600
I
0.876
Solyc08g006020.2
Solanum lycopersicum
Solyc08g006020.2
I
0.876
evm.TU.supercontig_3.509
Carica papaya
evm.TU.supercontig_3.509
I
0.876
OPUNC06G13130
Oryza punctata
OPUNC06G13130
I
0.876
OLONG_019251
Oryza longistaminata
OLONG_019251
I
0.876
Pm015914
Prunus mume
Pm015914
I
0.876
SapurV1A.0346s0160
Salix purpurea
SapurV1A.0346s0160
I
0.875
Solyc02g088180.2
Solanum lycopersicum
Solyc02g088180.2
I
0.874
AMTR_s00079p00099620
Amborella trichopoda
AMTR_s00079p00099620
I
0.874
SELMODRAFT_95019
Selaginella moellendorffii
SELMODRAFT_95019
I
0.874
PGSC0003DMG400001338
Solanum tuberosum
PGSC0003DMG400001338
I
0.874
Lus10009029.g
Linum usitatissimum
Lus10009029.g
I
0.874
LPERR03G21900
Leersia perrieri
LPERR03G21900
I
0.873
Thhalv10013863m.g
Eutrema salsugineum
Thhalv10013863m.g
I
0.873
Bo9g113820
Brassica oleracea
Bo9g113820
I
0.873
GLYMA19G02850
Glycine max
GLYMA19G02850
I
0.873
VIT_14s0108g01070
Vitis vinifera
VIT_14s0108g01070
I
0.872
anac058
Vitis vinifera
VIT_17s0000g03660
I
0.872
orange1.1g047710m.g
Citrus sinensis
orange1.1g047710m.g
I
0.872
SELMODRAFT_77371
Selaginella moellendorffii
SELMODRAFT_77371
I
0.872
PGSC0003DMG400014845
Solanum tuberosum
PGSC0003DMG400014845
I
0.872
Ciclev10008619m.g
Citrus clementina
Ciclev10008619m.g
I
0.872
BGIOSGA013151
Oryza indica
BGIOSGA013151
I
0.871
OMERI03G23890
Oryza meridionalis
OMERI03G23890
I
0.871
PGSC0003DMG400029593
Solanum tuberosum
PGSC0003DMG400029593
I
0.871
PRUPE_ppa007653mg
Prunus persica
PRUPE_ppa007653mg
I
0.871
Sb01g014310
Sorghum bicolor
Sb01g014310
I
0.871
OS03G0624600
Oryza sativa
OS03G0624600
I
0.871
ORUFI03G27440
Oryza rufipogon
ORUFI03G27440
I
0.871
OGLUM03G27330
Oryza glumaepatula
OGLUM03G27330
I
0.871
ONIVA03G27500
Oryza nivara
ONIVA03G27500
I
0.871
ORGLA03G0246300
Oryza glaberrima
ORGLA03G0246300
I
0.871
OBART03G26480
Oryza barthii
OBART03G26480
I
0.871