Bo4g154590 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo4g154590 T292384_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC038
M07188_2.00 		Arabidopsis thaliana
DNCKTRHNNHDCAMGYWA
TWRCKTGHDNNDYAMGNH		 Dap-seq
OMalley et al.(2016)
ANAC038_col_a 		0.969 0.982
ANAC038
M07189_2.00 		Arabidopsis thaliana
TTDCTTGWNNHDYAMGHHAHH
DDTDDCKTRHDNNWCAAGHAA		 Dap-seq
OMalley et al.(2016)
ANAC038_colamp_a 		0.969 0.982
anac058
M00886_2.00 		Arabidopsis thaliana
CGTTGTCT
AGACAACG		 PBM
Franco-Zorrilla et al.(2014)
ANAC58 		0.883 0.772
anac058
M07210_2.00 		Arabidopsis thaliana
CKTGHNNNRCAMGYWA
TWRCKTGYNNNDCAMG		 Dap-seq
OMalley et al.(2016)
ANAC058_col_a 		0.883 0.772
anac058
M07211_2.00 		Arabidopsis thaliana
TDCKTGHNNNDCAMGHHA
TDDCKTGHNNNDCAMGHA		 Dap-seq
OMalley et al.(2016)
ANAC058_colamp_a 		0.883 0.772
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g154590.1 NAC/NAM 17 143

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10025508m.g Capsella rubella Carubv10025508m.g I 0.969
Bra032095 Brassica rapa Bra032095 I 0.969
Cagra.4091s0015 Capsella grandiflora Cagra.4091s0015 I 0.969
Bo8g099810 Brassica oleracea Bo8g099810 I 0.969
ANAC039 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4000352 I 0.969
Bostr.27895s0039 Boechera stricta Bostr.27895s0039 I 0.969
ANAC038 Arabidopsis thaliana AT2G24430 D 0.969
Bra007855 Brassica rapa Bra007855 I 0.969
Thhalv10000520m.g Eutrema salsugineum Thhalv10000520m.g I 0.967
Solyc08g006020.2 Solanum lycopersicum Solyc08g006020.2 I 0.944
GLYMA14G20276 Glycine max GLYMA14G20276 I 0.944
PGSC0003DMG400014845 Solanum tuberosum PGSC0003DMG400014845 I 0.941
28226.m000851 Ricinus communis 28226.m000851 I 0.939
evm.TU.supercontig_244.7 Carica papaya evm.TU.supercontig_244.7 I 0.939
gene08765-v1.0-hybrid Fragaria vesca gene08765-v1.0-hybrid I 0.938
PRUPE_ppa025916mg Prunus persica PRUPE_ppa025916mg I 0.938
Pm005091 Prunus mume Pm005091 I 0.938
MTR_3g109340 Medicago truncatula MTR_3g109340 I 0.937
Eucgr.C02105 Eucalyptus grandis Eucgr.C02105 I 0.937
ANAC039 Vitis vinifera VIT_04s0008g02710 I 0.937
orange1.1g037591m.g Citrus sinensis orange1.1g037591m.g I 0.936
Ciclev10008885m.g Citrus clementina Ciclev10008885m.g I 0.936
Gorai.010G124100 Gossypium raimondii Gorai.010G124100 I 0.936
MDP0000690168 Malus domestica MDP0000690168 I 0.936
MDP0000232008 Malus domestica MDP0000232008 I 0.936
cassava18338.valid.m1 Manihot esculenta cassava18338.valid.m1 I 0.936
TCM_036791 Theobroma cacao TCM_036791 I 0.936
chr1.LjT35C22.60.nc Lotus japonicus chr1.LjT35C22.60.nc I 0.935
PK02366.1 Cannabis sativa PK02366.1 I 0.932
GLYMA04G08320 Glycine max GLYMA04G08320 I 0.925
GLYMA06G08440 Glycine max GLYMA06G08440 I 0.924
Cucsa.161510 Cucumis sativus Cucsa.161510 I 0.923
Cla022572 Citrullus lanatus Cla022572 I 0.923
SapurV1A.1285s0100 Salix purpurea SapurV1A.1285s0100 I 0.921
Aquca_018_00116 Aquilegia coerulea Aquca_018_00116 I 0.921
SapurV1A.1363s0020 Salix purpurea SapurV1A.1363s0020 I 0.921
POPTR_0018s03910 Populus trichocarpa POPTR_0018s03910 I 0.921
Lus10026966.g Linum usitatissimum Lus10026966.g I 0.919
SapurV1A.0263s0310 Salix purpurea SapurV1A.0263s0310 I 0.918
Cucsa.197830 Cucumis sativus Cucsa.197830 I 0.918
Cla019391 Citrullus lanatus Cla019391 I 0.918
Lus10020165.g Linum usitatissimum Lus10020165.g I 0.916
mgf025158m Mimulus guttatus mgf025158m I 0.915
POPTR_0006s29180 Populus trichocarpa POPTR_0006s29180 I 0.915
GSMUA_Achr7G19680_001 Musa acuminata GSMUA_Achr7G19680_001 I 0.913
SELMODRAFT_67245 Selaginella moellendorffii SELMODRAFT_67245 I 0.912
SELMODRAFT_71303 Selaginella moellendorffii SELMODRAFT_71303 I 0.912
Bra037585 Brassica rapa Bra037585 I 0.906
Bo1g117610 Brassica oleracea Bo1g117610 I 0.906
gene26043-v1.0-hybrid Fragaria vesca gene26043-v1.0-hybrid I 0.903
Lus10021659.g Linum usitatissimum Lus10021659.g I 0.900
Lus10001648.g Linum usitatissimum Lus10001648.g I 0.900
MTR_4g108760 Medicago truncatula MTR_4g108760 I 0.899
GLYMA13G34950 Glycine max GLYMA13G34950 I 0.897
GLYMA12G35530 Glycine max GLYMA12G35530 I 0.897
MTR_1g008740 Medicago truncatula MTR_1g008740 I 0.897
AMTR_s00025p00174590 Amborella trichopoda AMTR_s00025p00174590 I 0.896
Bra003023 Brassica rapa Bra003023 I 0.896
GSMUA_Achr10G22350_001 Musa acuminata GSMUA_Achr10G22350_001 I 0.896
cassava17517.valid.m1 Manihot esculenta cassava17517.valid.m1 I 0.895
30138.m004055 Ricinus communis 30138.m004055 I 0.895
POPTR_0012s01610 Populus trichocarpa POPTR_0012s01610 I 0.895
GRMZM2G386163 Zea mays GRMZM2G386163 I 0.895
SapurV1A.0377s0130 Salix purpurea SapurV1A.0377s0130 I 0.895
Ca_11021 Cicer arietinum Ca_11021 I 0.894
cassava46147.m1 Manihot esculenta cassava46147.m1 I 0.893
Si030187m.g Setaria italica Si030187m.g I 0.893
Sb02g028870 Sorghum bicolor Sb02g028870 I 0.893
ORGLA09G0117400 Oryza glaberrima ORGLA09G0117400 I 0.893
OBART09G15220 Oryza barthii OBART09G15220 I 0.893
OGLUM09G15820 Oryza glumaepatula OGLUM09G15820 I 0.893
OMERI07G04410 Oryza meridionalis OMERI07G04410 I 0.893
ONIVA09G15800 Oryza nivara ONIVA09G15800 I 0.893
LPERR09G11330 Leersia perrieri LPERR09G11330 I 0.893
Bra022319 Brassica rapa Bra022319 I 0.893
BGIOSGA029508 Oryza indica BGIOSGA029508 I 0.893
Bo01320s020 Brassica oleracea Bo01320s020 I 0.893
Bo3g071500 Brassica oleracea Bo3g071500 I 0.893
Bra001705 Brassica rapa Bra001705 I 0.893
OPUNC09G13640 Oryza punctata OPUNC09G13640 I 0.893
OLONG_009674 Oryza longistaminata OLONG_009674 I 0.893
ORUFI09G16430 Oryza rufipogon ORUFI09G16430 I 0.893
OS09G0497900 Oryza sativa OS09G0497900 I 0.893
Pavir.J02772 Panicum virgatum Pavir.J02772 I 0.893
Ciclev10020480m.g Citrus clementina Ciclev10020480m.g I 0.892
orange1.1g017827m.g Citrus sinensis orange1.1g017827m.g I 0.892
Solyc03g115850.2 Solanum lycopersicum Solyc03g115850.2 I 0.892
VIT_19s0014g02200 Vitis vinifera VIT_19s0014g02200 I 0.891
Thhalv10021200m.g Eutrema salsugineum Thhalv10021200m.g I 0.889
POPTR_0015s02170 Populus trichocarpa POPTR_0015s02170 I 0.889
PGSC0003DMG400033047 Solanum tuberosum PGSC0003DMG400033047 I 0.889
Solyc06g069710.2 Solanum lycopersicum Solyc06g069710.2 I 0.889
MDP0000246482 Malus domestica MDP0000246482 I 0.888
LjSGA_071377.1 Lotus japonicus LjSGA_071377.1 I 0.888
POPTR_0012s05280 Populus trichocarpa POPTR_0012s05280 I 0.888
Cucsa.122890 Cucumis sativus Cucsa.122890 I 0.888
MDP0000153949 Malus domestica MDP0000153949 I 0.888
PGSC0003DMG400019523 Solanum tuberosum PGSC0003DMG400019523 I 0.887
27950.m000105 Ricinus communis 27950.m000105 I 0.887
Cagra.1681s0009 Capsella grandiflora Cagra.1681s0009 I 0.887
evm.TU.supercontig_131.88 Carica papaya evm.TU.supercontig_131.88 I 0.887
Gorai.002G067300 Gossypium raimondii Gorai.002G067300 I 0.887
TCM_031619 Theobroma cacao TCM_031619 I 0.887
GLYMA06G35660 Glycine max GLYMA06G35660 I 0.886
AMTR_s00079p00099620 Amborella trichopoda AMTR_s00079p00099620 I 0.886
GLYMA12G26190 Glycine max GLYMA12G26190 I 0.886
Cla023717 Citrullus lanatus Cla023717 I 0.886
PDK_20s1323531g003 Phoenix dactylifera PDK_20s1323531g003 I 0.886
GRMZM2G008374 Zea mays GRMZM2G008374 I 0.885
Carubv10015990m.g Capsella rubella Carubv10015990m.g I 0.884
PGSC0003DMG400029593 Solanum tuberosum PGSC0003DMG400029593 I 0.884
SapurV1A.1146s0010 Salix purpurea SapurV1A.1146s0010 I 0.884
SapurV1A.1381s0060 Salix purpurea SapurV1A.1381s0060 I 0.884
evm.TU.supercontig_3.509 Carica papaya evm.TU.supercontig_3.509 I 0.884
SapurV1A.1381s0050 Salix purpurea SapurV1A.1381s0050 I 0.884
estExt_gwp_gw1.C_460173 Physcomitrella patens estExt_gwp_gw1.C_460173 I 0.883
anac058 Arabidopsis thaliana AT3G18400 D 0.883
Lus10005537.g Linum usitatissimum Lus10005537.g I 0.883
Solyc08g074300.2 Solanum lycopersicum Solyc08g074300.2 I 0.883
anac058 Arabidopsis lyrata Al_scaffold_0003_1942 I 0.883
Lus10041924.g Linum usitatissimum Lus10041924.g I 0.883
MDP0000310981 Malus domestica MDP0000310981 I 0.882
Ca_22532 Cicer arietinum Ca_22532 I 0.882
PRUPE_ppa026810mg Prunus persica PRUPE_ppa026810mg I 0.882
Pm011397 Prunus mume Pm011397 I 0.882
mgf021065m Mimulus guttatus mgf021065m I 0.882
cassava44869.m1 Manihot esculenta cassava44869.m1 I 0.882
cassava9086.m1 Manihot esculenta cassava9086.m1 I 0.881
SapurV1A.0207s0120 Salix purpurea SapurV1A.0207s0120 I 0.881
POPTR_0001s40680 Populus trichocarpa POPTR_0001s40680 I 0.881
Gorai.006G060900 Gossypium raimondii Gorai.006G060900 I 0.880
Ciclev10023578m.g Citrus clementina Ciclev10023578m.g I 0.880
POPTR_0015s03700 Populus trichocarpa POPTR_0015s03700 I 0.880
OBART06G13940 Oryza barthii OBART06G13940 I 0.880
OGLUM06G14810 Oryza glumaepatula OGLUM06G14810 I 0.880
Bostr.26675s0262 Boechera stricta Bostr.26675s0262 I 0.880
OB06G22100 Oryza brachyantha OB06G22100 I 0.880
MTR_2g078700 Medicago truncatula MTR_2g078700 I 0.880
BGIOSGA022861 Oryza indica BGIOSGA022861 I 0.880
GSMUA_Achr6G01770_001 Musa acuminata GSMUA_Achr6G01770_001 I 0.880
ONIVA03G33370 Oryza nivara ONIVA03G33370 I 0.880
OLONG_019251 Oryza longistaminata OLONG_019251 I 0.880
29974.m000235 Ricinus communis 29974.m000235 I 0.880
OPUNC06G13130 Oryza punctata OPUNC06G13130 I 0.880
ORUFI06G14810 Oryza rufipogon ORUFI06G14810 I 0.880
OS06G0344900 Oryza sativa OS06G0344900 I 0.880
Bostr.19424s0822 Boechera stricta Bostr.19424s0822 I 0.880
ORGLA06G0124600 Oryza glaberrima ORGLA06G0124600 I 0.880
chr3.CM0282.730.nc Lotus japonicus chr3.CM0282.730.nc I 0.879
F775_52293 Aegilops tauschii F775_52293 I 0.879
LPERR06G12840 Leersia perrieri LPERR06G12840 I 0.879
Gorai.013G171300 Gossypium raimondii Gorai.013G171300 I 0.879
Gorai.007G323900 Gossypium raimondii Gorai.007G323900 I 0.879
MLOC_68185 Hordeum vulgare MLOC_68185 I 0.879
TCM_012350 Theobroma cacao TCM_012350 I 0.879
TRIUR3_20591 Triticum urartu TRIUR3_20591 I 0.879
Thhalv10011708m.g Eutrema salsugineum Thhalv10011708m.g I 0.878
Solyc12g036480.1 Solanum lycopersicum Solyc12g036480.1 I 0.878
Eucgr.K02225 Eucalyptus grandis Eucgr.K02225 I 0.878
cassava2919.m1 Manihot esculenta cassava2919.m1 I 0.877
Aquca_033_00035 Aquilegia coerulea Aquca_033_00035 I 0.877
Eucgr.B00724 Eucalyptus grandis Eucgr.B00724 I 0.877
Aquca_026_00305 Aquilegia coerulea Aquca_026_00305 I 0.876
SapurV1A.2059s0010 Salix purpurea SapurV1A.2059s0010 I 0.875
SapurV1A.1325s0010 Salix purpurea SapurV1A.1325s0010 I 0.875
Si036535m.g Setaria italica Si036535m.g I 0.875
POPTR_0011s11600 Populus trichocarpa POPTR_0011s11600 I 0.875
gene00971-v1.0-hybrid Fragaria vesca gene00971-v1.0-hybrid I 0.875
mgf021404m Mimulus guttatus mgf021404m I 0.874
TRIUR3_00446 Triticum urartu TRIUR3_00446 I 0.873
SapurV1A.0719s0060 Salix purpurea SapurV1A.0719s0060 I 0.873
ONIVA03G27500 Oryza nivara ONIVA03G27500 I 0.872
OMERI03G23890 Oryza meridionalis OMERI03G23890 I 0.872
OGLUM03G27330 Oryza glumaepatula OGLUM03G27330 I 0.872
OPUNC03G24220 Oryza punctata OPUNC03G24220 I 0.872
OBART03G26480 Oryza barthii OBART03G26480 I 0.872
ORUFI03G27440 Oryza rufipogon ORUFI03G27440 I 0.872
BGIOSGA013151 Oryza indica BGIOSGA013151 I 0.872
AMTR_s00058p00136280 Amborella trichopoda AMTR_s00058p00136280 I 0.872
OS03G0624600 Oryza sativa OS03G0624600 I 0.872
ORGLA03G0246300 Oryza glaberrima ORGLA03G0246300 I 0.872
PGSC0003DMG400005384 Solanum tuberosum PGSC0003DMG400005384 I 0.871
MDP0000135860 Malus domestica MDP0000135860 I 0.871
LPERR03G21900 Leersia perrieri LPERR03G21900 I 0.871