CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb09g008000
(
Sorghum bicolor
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Sb09g008000
T295589_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb09g008000.1
NAC/NAM
23
152
LPGFRFHPNDFEIVNDYLMKKVHNRDFICAIGEVDLNKTEPWDLPREAKMNEKEWYFFSKKDRKYPTGLRANRATEAGYWKATGKDKEVYKPSKGEGVVLLIGMKKTLVFYEGRAPRGNKTNWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Sorghum bicolor
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.0556s0555
Boechera stricta
Bostr.0556s0555
I
0.945
OLONG_022415
Oryza longistaminata
OLONG_022415
I
0.943
OGLUM01G19440
Oryza glumaepatula
OGLUM01G19440
I
0.943
OBART01G16620
Oryza barthii
OBART01G16620
I
0.943
ONIVA01G00280
Oryza nivara
ONIVA01G00280
I
0.943
OGLUM01G00350
Oryza glumaepatula
OGLUM01G00350
I
0.943
ORGLA12G0187900
Oryza glaberrima
ORGLA12G0187900
I
0.943
OS01G0393100
Oryza sativa
OS01G0393100
I
0.943
ORUFI01G18470
Oryza rufipogon
ORUFI01G18470
I
0.943
ORUFI01G00320
Oryza rufipogon
ORUFI01G00320
I
0.943
OBART01G00360
Oryza barthii
OBART01G00360
I
0.943
ONIVA01G18370
Oryza nivara
ONIVA01G18370
I
0.943
OMERI01G15230
Oryza meridionalis
OMERI01G15230
I
0.943
BGIOSGA002597
Oryza indica
BGIOSGA002597
I
0.943
BGIOSGA001578
Oryza indica
BGIOSGA001578
I
0.943
OS01G0104500
Oryza sativa
OS01G0104500
I
0.942
OPUNC01G00320
Oryza punctata
OPUNC01G00320
I
0.941
OMERI01G15210
Oryza meridionalis
OMERI01G15210
I
0.940
OB01G10300
Oryza brachyantha
OB01G10300
I
0.940
LPERR01G00270
Leersia perrieri
LPERR01G00270
I
0.938
AMTR_s00022p00160350
Amborella trichopoda
AMTR_s00022p00160350
I
0.924
Cagra.27691s0001
Capsella grandiflora
Cagra.27691s0001
I
0.921
OPUNC08G18240
Oryza punctata
OPUNC08G18240
I
0.917
BGIOSGA026695
Oryza indica
BGIOSGA026695
I
0.916
ONIVA08G22710
Oryza nivara
ONIVA08G22710
I
0.916
ORGLA08G0177600
Oryza glaberrima
ORGLA08G0177600
I
0.915
OGLUM08G21360
Oryza glumaepatula
OGLUM08G21360
I
0.915
OS08G0511200
Oryza sativa
OS08G0511200
I
0.915
MLOC_13932
Hordeum vulgare
MLOC_13932
I
0.915
ORUFI08G22550
Oryza rufipogon
ORUFI08G22550
I
0.915
LPERR08G17020
Leersia perrieri
LPERR08G17020
I
0.913
Pavir.Gb01850
Panicum virgatum
Pavir.Gb01850
I
0.905
OS04G0460600
Oryza sativa
OS04G0460600
I
0.902
ORUFI04G16370
Oryza rufipogon
ORUFI04G16370
I
0.902
BGIOSGA016546
Oryza indica
BGIOSGA016546
I
0.902
ORGLA04G0119700
Oryza glaberrima
ORGLA04G0119700
I
0.902
OBART04G14970
Oryza barthii
OBART04G14970
I
0.902
OGLUM04G14830
Oryza glumaepatula
OGLUM04G14830
I
0.902
ONIVA04G13100
Oryza nivara
ONIVA04G13100
I
0.902
Solyc08g074300.2
Solanum lycopersicum
Solyc08g074300.2
I
0.901
GRMZM2G139700
Zea mays
GRMZM2G139700
I
0.898
Sb06g019010
Sorghum bicolor
Sb06g019010
I
0.897
Si010553m.g
Setaria italica
Si010553m.g
I
0.894
PGSC0003DMG400009920
Solanum tuberosum
PGSC0003DMG400009920
I
0.894
OBART11G01600
Oryza barthii
OBART11G01600
N
0.894
PGSC0003DMG400029593
Solanum tuberosum
PGSC0003DMG400029593
I
0.894
GRMZM2G154182
Zea mays
GRMZM2G154182
N
0.893
MLOC_65286
Hordeum vulgare
MLOC_65286
I
0.890
Traes_7AL_74CC91D39
Triticum aestivum
Traes_7AL_74CC91D39
I
0.890
F775_20638
Aegilops tauschii
F775_20638
I
0.890
e_gw1.259.32.1
Physcomitrella patens
e_gw1.259.32.1
I
0.887
LPERR02G17680
Leersia perrieri
LPERR02G17680
N
0.886
OMERI12G00500
Oryza meridionalis
OMERI12G00500
N
0.885
LPERR04G11740
Leersia perrieri
LPERR04G11740
I
0.881
OLONG_023103
Oryza longistaminata
OLONG_023103
I
0.880
OLONG_008218
Oryza longistaminata
OLONG_008218
I
0.880
OGLUM11G01330
Oryza glumaepatula
OGLUM11G01330
N
0.880
BGIOSGA034714
Oryza indica
BGIOSGA034714
N
0.873
ONIVA11G01640
Oryza nivara
ONIVA11G01640
N
0.873
orange1.1g021772m.g
Citrus sinensis
orange1.1g021772m.g
N
0.873