CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
29992.m001406
(
Ricinus communis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
29992.m001406
T296777_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.906
0.407
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.906
0.407
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY
RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.906
0.407
NAC48
M11084_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.879
0.372
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29992.m001406
NAC/NAM
10
129
PPGFRFCPTDEELVSHFLYPKASLSSSCSNLIPELFLPPDPWKLHGKALSSGNQWYFFTQKKIMQSHQETENGFWKHLDIEEPILSDAGTKIGLKKLVMYYIGQHPTAIETSWMMQEYHL
Links
Other
NAC/NAM
family TFs
Other
Ricinus communis
TFs
81 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA05G32590
Glycine max
GLYMA05G32590
I
0.954
MTR_8g093790
Medicago truncatula
MTR_8g093790
I
0.932
AMTR_s00017p00255350
Amborella trichopoda
AMTR_s00017p00255350
I
0.921
e_gw1.259.4.1
Physcomitrella patens
e_gw1.259.4.1
I
0.913
e_gw1.164.26.1
Physcomitrella patens
e_gw1.164.26.1
I
0.912
Ca_00111
Cicer arietinum
Ca_00111
I
0.911
e_gw1.117.35.1
Physcomitrella patens
e_gw1.117.35.1
I
0.910
SapurV1A.0171s0340
Salix purpurea
SapurV1A.0171s0340
I
0.910
e_gw1.140.53.1
Physcomitrella patens
e_gw1.140.53.1
I
0.909
e_gw1.164.18.1
Physcomitrella patens
e_gw1.164.18.1
I
0.908
mgf019285m
Mimulus guttatus
mgf019285m
I
0.908
ATAF1
Arabidopsis lyrata
scaffold_100066.1
I
0.908
GSMUA_Achr4G02390_001
Musa acuminata
GSMUA_Achr4G02390_001
I
0.907
MTR_3g096400
Medicago truncatula
MTR_3g096400
N
0.907
GSMUA_Achr7G21780_001
Musa acuminata
GSMUA_Achr7G21780_001
I
0.906
Cagra.1968s0112
Capsella grandiflora
Cagra.1968s0112
I
0.906
Bostr.5325s0094
Boechera stricta
Bostr.5325s0094
I
0.906
SapurV1A.0740s0040
Salix purpurea
SapurV1A.0740s0040
I
0.906
Bra033239
Brassica rapa
Bra033239
I
0.906
NAC002
Arabidopsis thaliana
AT1G01720
D
0.906
SapurV1A.3767s0010
Salix purpurea
SapurV1A.3767s0010
I
0.906
cassava28909.valid.m1
Manihot esculenta
cassava28909.valid.m1
I
0.906
Carubv10009926m.g
Capsella rubella
Carubv10009926m.g
I
0.906
Bo5g001100
Brassica oleracea
Bo5g001100
I
0.906
GLYMA14G24220
Glycine max
GLYMA14G24220
I
0.905
e_gw1.5.134.1
Physcomitrella patens
e_gw1.5.134.1
I
0.904
SapurV1A.0365s0200
Salix purpurea
SapurV1A.0365s0200
I
0.903
Aquca_014_00255
Aquilegia coerulea
Aquca_014_00255
I
0.902
VIT_06s0004g00020
Vitis vinifera
VIT_06s0004g00020
I
0.901
PK26157.1
Cannabis sativa
PK26157.1
I
0.897
anac032
Vitis vinifera
VIT_18s0001g02300
I
0.896
TCM_035160
Theobroma cacao
TCM_035160
I
0.895
Gorai.010G051900
Gossypium raimondii
Gorai.010G051900
I
0.895
Solyc11g017470.1
Solanum lycopersicum
Solyc11g017470.1
I
0.892
Sb02g006680
Sorghum bicolor
Sb02g006680
I
0.892
GRMZM2G162739
Zea mays
GRMZM2G162739
I
0.892
GRMZM2G079632
Zea mays
GRMZM2G079632
I
0.892
Solyc04g009440.2
Solanum lycopersicum
Solyc04g009440.2
I
0.891
GSMUA_Achr6G18720_001
Musa acuminata
GSMUA_Achr6G18720_001
I
0.891
Gorai.005G088800
Gossypium raimondii
Gorai.005G088800
I
0.890
LPERR05G13490
Leersia perrieri
LPERR05G13490
I
0.890
SapurV1A.0869s0210
Salix purpurea
SapurV1A.0869s0210
I
0.888
Pavir.Ba03301
Panicum virgatum
Pavir.Ba03301
I
0.885
LPERR07G06440
Leersia perrieri
LPERR07G06440
I
0.883
Si030752m.g
Setaria italica
Si030752m.g
I
0.883
Cucsa.228480
Cucumis sativus
Cucsa.228480
N
0.883
SapurV1A.0344s0360
Salix purpurea
SapurV1A.0344s0360
I
0.882
BRADI2G03467
Brachypodium distachyon
BRADI2G03467
I
0.882
Pavir.Bb00806
Panicum virgatum
Pavir.Bb00806
I
0.882
ORGLA01G0334900
Oryza glaberrima
ORGLA01G0334900
I
0.879
BRADI2G57100
Brachypodium distachyon
BRADI2G57100
I
0.879
GSMUA_Achr4G32010_001
Musa acuminata
GSMUA_Achr4G32010_001
I
0.879
LPERR01G34090
Leersia perrieri
LPERR01G34090
I
0.879
OB01G48340
Oryza brachyantha
OB01G48340
I
0.879
OPUNC01G38300
Oryza punctata
OPUNC01G38300
I
0.879
OMERI01G36460
Oryza meridionalis
OMERI01G36460
I
0.879
ONIVA01G44460
Oryza nivara
ONIVA01G44460
I
0.879
BGIOSGA000374
Oryza indica
BGIOSGA000374
I
0.879
NAC48
Oryza sativa
OS01G0884300
D
0.879
cassava27052.m1
Manihot esculenta
cassava27052.m1
I
0.879
ORUFI01G42940
Oryza rufipogon
ORUFI01G42940
I
0.879
OBART01G39590
Oryza barthii
OBART01G39590
I
0.879
OGLUM01G43820
Oryza glumaepatula
OGLUM01G43820
I
0.879
Sb03g041920
Sorghum bicolor
Sb03g041920
I
0.878
F775_28813
Aegilops tauschii
F775_28813
I
0.878
GLYMA05G32850
Glycine max
GLYMA05G32850
I
0.878
Si002413m.g
Setaria italica
Si002413m.g
I
0.878
TRIUR3_14109
Triticum urartu
TRIUR3_14109
I
0.878
OB05G24820
Oryza brachyantha
OB05G24820
I
0.878
TRAES3BF002300010CFD_g
Triticum aestivum
TRAES3BF002300010CFD_g
I
0.878
Gorai.006G088400
Gossypium raimondii
Gorai.006G088400
I
0.877
OGLUM05G17980
Oryza glumaepatula
OGLUM05G17980
I
0.877
ORGLA05G0146600
Oryza glaberrima
ORGLA05G0146600
I
0.877
ONIVA05G17670
Oryza nivara
ONIVA05G17670
I
0.877
BGIOSGA019897
Oryza indica
BGIOSGA019897
I
0.877
GRMZM2G014653
Zea mays
GRMZM2G014653
I
0.877
SapurV1A.0093s0260
Salix purpurea
SapurV1A.0093s0260
I
0.876
GSMUA_Achr9G10040_001
Musa acuminata
GSMUA_Achr9G10040_001
I
0.875
MTR_8g094580
Medicago truncatula
MTR_8g094580
I
0.874
POPTR_0007s04780
Populus trichocarpa
POPTR_0007s04780
I
0.871
PK25436.1
Cannabis sativa
PK25436.1
N
0.871