cassava22173.valid.m1 (Manihot esculenta)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 cassava22173.valid.m1 T296856_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
anac028
M01289_2.00
Arabidopsis thaliana
NTTGCGTRH

DYACGCAAN
PBM
Lambert et al.(2019)
pTH9962
0.873 0.702
anac028
M07179_2.00
Arabidopsis thaliana
CTTSHNNHDCAMGYWA

TWRCKTGHDNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC028_col_a
0.873 0.702
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava22173.valid.m1 NAC/NAM 20 146

Links

Other NAC/NAM family TFs
Other Manihot esculenta TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
anac028 Arabidopsis lyrata Al_scaffold_0002_1137 I 0.873
anac028 Arabidopsis thaliana AT1G65910 D 0.873
ANAC13 Arabidopsis lyrata fgenesh2_kg.1__3425__AT1G32870.2 I 0.880
Aquca_017_00010 Aquilegia coerulea Aquca_017_00010 N 0.914
Bo2g052630 Brassica oleracea Bo2g052630 I 0.875
Bostr.26959s0323 Boechera stricta Bostr.26959s0323 I 0.875
Bostr.3359s0074 Boechera stricta Bostr.3359s0074 I 0.873
Bra039745 Brassica rapa Bra039745 I 0.875
Cagra.11446s0003 Capsella grandiflora Cagra.11446s0003 I 0.875
Carubv10021788m.g Capsella rubella Carubv10021788m.g I 0.875
cassava19069.valid.m1 Manihot esculenta cassava19069.valid.m1 I 0.902
Ca_04337 Cicer arietinum Ca_04337 N 0.904
Ciclev10000612m.g Citrus clementina Ciclev10000612m.g I 0.942
Cla013854 Citrullus lanatus Cla013854 I 0.943
Cla016588 Citrullus lanatus Cla016588 N 0.924
Cucsa.364130 Cucumis sativus Cucsa.364130 N 0.934
Eucgr.F02771 Eucalyptus grandis Eucgr.F02771 N 0.910
evm.TU.supercontig_26.135 Carica papaya evm.TU.supercontig_26.135 I 0.943
gene27539-v1.0-hybrid Fragaria vesca gene27539-v1.0-hybrid N 0.919
GLYMA10G36360 Glycine max GLYMA10G36360 N 0.924
GLYMA20G31210 Glycine max GLYMA20G31210 N 0.919
Gorai.005G076200 Gossypium raimondii Gorai.005G076200 I 0.939
Gorai.009G260000 Gossypium raimondii Gorai.009G260000 I 0.959
GSMUA_AchrUn_randomG11980_001 Musa acuminata GSMUA_AchrUn_randomG11980_001 I 0.893
LjSGA_007769.1 Lotus japonicus LjSGA_007769.1 N 0.889
Lus10008285.g Linum usitatissimum Lus10008285.g I 0.878
Lus10028713.g Linum usitatissimum Lus10028713.g I 0.932
Lus10033251.g Linum usitatissimum Lus10033251.g I 0.878
MDP0000146969 Malus domestica MDP0000146969 I 0.933
MDP0000169485 Malus domestica MDP0000169485 I 0.933
MDP0000852271 Malus domestica MDP0000852271 I 0.919
mg018130m Mimulus guttatus mg018130m I 0.884
MTR_1g097300 Medicago truncatula MTR_1g097300 N 0.897
PGSC0003DMG400031149 Solanum tuberosum PGSC0003DMG400031149 I 0.882
Pm022358 Prunus mume Pm022358 N 0.918
POPTR_0001s45700 Populus trichocarpa POPTR_0001s45700 I 0.890
POPTR_0002s06210 Populus trichocarpa POPTR_0002s06210 I 0.946
POPTR_0005s22180 Populus trichocarpa POPTR_0005s22180 I 0.942
POPTR_0011s15230 Populus trichocarpa POPTR_0011s15230 I 0.884
PRUPE_ppa003410mg Prunus persica PRUPE_ppa003410mg N 0.918
SapurV1A.0134s0420 Salix purpurea SapurV1A.0134s0420 I 0.945
SapurV1A.0348s0040 Salix purpurea SapurV1A.0348s0040 I 0.932
Solyc04g072220.2 Solanum lycopersicum Solyc04g072220.2 I 0.881
TCM_036587 Theobroma cacao TCM_036587 I 0.953
Thhalv10018275m.g Eutrema salsugineum Thhalv10018275m.g I 0.875
VIT_18s0001g01820 Vitis vinifera VIT_18s0001g01820 I 0.947