e_gw1.164.26.1 (Physcomitrella patens)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 e_gw1.164.26.1 T297032_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN

NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.987 0.763
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND

HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.987 0.763
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY

RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.987 0.763
NAC48
M11084_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.984 0.754
AT3G12910
M07204_2.00
Arabidopsis thaliana
YGSCGKNDNDDHNMCGB

VCGKNDHHNHNMCGSCR
Dap-seq
OMalley et al.(2016)
AT3G12910_col_a
0.943 0.553
NAC101
M07241_2.00
Arabidopsis thaliana
TGCKTVNDNHNYAMG

CKTRNDNHNBAMGCA
Dap-seq
OMalley et al.(2016)
VND6_colamp_a
0.892 0.596
NAC101
M07242_2.00
Arabidopsis thaliana
TTGCKTVHDNNNYAMGYHWHN

NDWDRCKTRNNNHDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND6_col_v31
0.892 0.596
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.164.26.1 NAC/NAM 14 140

Links

Other NAC/NAM family TFs
Other Physcomitrella patens TFs

552 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACAC_0000449001 Angiostrongylus cantonensis ACAC_0000449001 I 0.000
ACOC_0001074701 Angiostrongylus costaricensis ACOC_0001074701 I 0.000
ALUE_0000980501 Ascaris lumbricoides ALUE_0000980501 I 0.000
ANCCAN_08211 Ancylostoma caninum ANCCAN_08211 I 0.000
ASU_07400 Ascaris suum ASU_07400 I 0.000
Bm3734 Brugia malayi Bm3734 I 0.000
BXY_0327500 Bursaphelenchus xylophilus BXY_0327500 I 0.000
CBG00123 Caenorhabditis briggsae CBG00123 I 0.000
CRE14738 Caenorhabditis remanei CRE14738 I 0.000
DICVIV_10361 Dictyocaulus viviparus DICVIV_10361 I 0.000
GPLIN_000471400 Globodera pallida GPLIN_000471400 N 0.000
HPBE_0000822201 Heligmosomoides bakeri HPBE_0000822201 I 0.000
HPLM_0000729201 Haemonchus placei HPLM_0000729201 I 0.000
L596_g18571 Steinernema carpocapsae L596_g18571 I 0.000
L889_g13896 Steinernema feltiae L889_g13896 N 0.000
L892_g8133 Steinernema scapterisci L892_g8133 I 0.000
L898_g1167 Steinernema monticolum L898_g1167 I 0.000
LOAG_12992 Loa loa LOAG_12992 I 0.000
Minc08762 Meloidogyne incognita Minc08762 N 0.000
Minc11758 Meloidogyne incognita Minc11758 N 0.000
nDi.2.2.2.g08322 Dirofilaria immitis nDi.2.2.2.g08322 I 0.000
nOo.2.0.1.g08993 Onchocerca ochengi nOo.2.0.1.g08993 I 0.000
OESDEN_00181 Oesophagostomum dentatum OESDEN_00181 I 0.000
scaffold532-EXSNAP2012.4 Pristionchus exspectatus scaffold532-EXSNAP2012.4 I 0.000
SMUV_0000837101 Syphacia muris SMUV_0000837101 I 0.000
SPAL_0001051900 Strongyloides papillosus SPAL_0001051900 I 0.000
SSTP_0000225800 Strongyloides stercoralis SSTP_0000225800 I 0.000
SVE_1772700 Strongyloides venezuelensis SVE_1772700 I 0.000
TCLT_0001044101 Thelazia callipaeda TCLT_0001044101 I 0.000
odr-7 Caenorhabditis elegans WBGene00003854 D 0.000
WBGene00238790 Onchocerca volvulus WBGene00238790 I 0.000