e_gw1.164.26.1 (Physcomitrella patens)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 e_gw1.164.26.1 T297032_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN

NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.987 0.763
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND

HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.987 0.763
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY

RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.987 0.763
NAC48
M11084_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.984 0.754
AT3G12910
M07204_2.00
Arabidopsis thaliana
YGSCGKNDNDDHNMCGB

VCGKNDHHNHNMCGSCR
Dap-seq
OMalley et al.(2016)
AT3G12910_col_a
0.943 0.553
NAC101
M07241_2.00
Arabidopsis thaliana
TGCKTVNDNHNYAMG

CKTRNDNHNBAMGCA
Dap-seq
OMalley et al.(2016)
VND6_colamp_a
0.892 0.596
NAC101
M07242_2.00
Arabidopsis thaliana
TTGCKTVHDNNNYAMGYHWHN

NDWDRCKTRNNNHDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND6_col_v31
0.892 0.596
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.164.26.1 NAC/NAM 14 140

Links

Other NAC/NAM family TFs
Other Physcomitrella patens TFs

552 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ADAC006089 Anopheles darlingi ADAC006089 N 0.000
ASIS008522 Anopheles sinensis ASIS008522 N 0.000
AQUA007639 Anopheles quadriannulatus AQUA007639 N 0.000
AMIN011389 Anopheles minimus AMIN011389 N 0.000
AMEC000015 Anopheles melas AMEC000015 N 0.000
AFUN003720 Anopheles funestus AFUN003720 N 0.000
AFAF016275 Anopheles farauti AFAF016275 N 0.000
AEPI001428 Anopheles epiroticus AEPI001428 N 0.000
ADIR008796 Anopheles dirus ADIR008796 N 0.000
ACUA008783 Anopheles culicifacies ACUA008783 N 0.000
ACOM039160 Anopheles coluzzii ACOM039160 N 0.000
ACHR004176 Anopheles christyi ACHR004176 N 0.000
AATE007835 Anopheles atroparvus AATE007835 N 0.000
AARA002353 Anopheles arabiensis AARA002353 N 0.000
AALB006067 Anopheles albimanus AALB006067 N 0.000
AGAP005446 Anopheles gambiae AGAP005446 N 0.000
ASTEI02067 Anopheles stephensi ASTEI02067 N 0.000