Cagra.27949s0001 (Capsella grandiflora)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cagra.27949s0001 T297421_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC025
M02368_2.00 		Arabidopsis thaliana
YACGYAAY
RTTRCGTR		 PBM
Weirauch et al.(2014)
pTH7656 		0.930 0.878
NAC018
M07176_2.00 		Arabidopsis thaliana
DYACGBMAYYD
HRRTKVCGTRH		 Dap-seq
OMalley et al.(2016)
NAM_colamp_a 		0.923 0.897
NAC018
M07177_2.00 		Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA
TKVCGTRWNNNDNWMGNHW		 Dap-seq
OMalley et al.(2016)
NAM_col_v3a 		0.923 0.897
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.27949s0001.1.p NAC/NAM 1 122

Links

Other NAC/NAM family TFs
Other Capsella grandiflora TFs

152 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.28625s0148 Boechera stricta Bostr.28625s0148 I 0.953
Carubv10014008m.g Capsella rubella Carubv10014008m.g I 0.953
NAC056 Arabidopsis thaliana AT3G15510 I 0.953
Bra027237 Brassica rapa Bra027237 I 0.953
ATNAC2 Arabidopsis lyrata fgenesh2_kg.3__1698__AT3G15510.1 I 0.953
Thhalv10022353m.g Eutrema salsugineum Thhalv10022353m.g I 0.953
VIT_19s0014g03300 Vitis vinifera VIT_19s0014g03300 I 0.952
MTR_4g089135 Medicago truncatula MTR_4g089135 I 0.951
Bo5g127030 Brassica oleracea Bo5g127030 I 0.949
GLYMA13G35560 Glycine max GLYMA13G35560 I 0.944
TCM_031363 Theobroma cacao TCM_031363 I 0.944
Gorai.002G073800 Gossypium raimondii Gorai.002G073800 I 0.944
Ca_06901 Cicer arietinum Ca_06901 I 0.944
evm.TU.supercontig_80.94 Carica papaya evm.TU.supercontig_80.94 I 0.944
MTR_2g080010 Medicago truncatula MTR_2g080010 I 0.944
Gorai.009G433100 Gossypium raimondii Gorai.009G433100 I 0.944
27961.m000091 Ricinus communis 27961.m000091 I 0.944
cassava5169.m1 Manihot esculenta cassava5169.m1 I 0.944
Ca_19654 Cicer arietinum Ca_19654 I 0.943
Gorai.013G167100 Gossypium raimondii Gorai.013G167100 I 0.943
MDP0000868419 Malus domestica MDP0000868419 I 0.943
orange1.1g016791m.g Citrus sinensis orange1.1g016791m.g I 0.941
Ciclev10008628m.g Citrus clementina Ciclev10008628m.g I 0.941
TCM_029931 Theobroma cacao TCM_029931 I 0.940
Cucsa.074600 Cucumis sativus Cucsa.074600 I 0.940
Lus10043095.g Linum usitatissimum Lus10043095.g I 0.940
cassava42314.valid.m1 Manihot esculenta cassava42314.valid.m1 I 0.940
orange1.1g017854m.g Citrus sinensis orange1.1g017854m.g I 0.940
Cla011948 Citrullus lanatus Cla011948 I 0.940
Ciclev10015688m.g Citrus clementina Ciclev10015688m.g I 0.940
Lus10032657.g Linum usitatissimum Lus10032657.g I 0.940
LjSGA_023894.2 Lotus japonicus LjSGA_023894.2 I 0.939
Si032676m.g Setaria italica Si032676m.g I 0.939
evm.TU.supercontig_27.81 Carica papaya evm.TU.supercontig_27.81 I 0.938
PRUPE_ppa007314mg Prunus persica PRUPE_ppa007314mg I 0.938
29851.m002359 Ricinus communis 29851.m002359 I 0.938
Pm009955 Prunus mume Pm009955 I 0.938
Gorai.009G170700 Gossypium raimondii Gorai.009G170700 I 0.938
Cucsa.341790 Cucumis sativus Cucsa.341790 I 0.937
Cla023771 Citrullus lanatus Cla023771 I 0.937
PK19059.1 Cannabis sativa PK19059.1 I 0.936
AMTR_s00003p00252470 Amborella trichopoda AMTR_s00003p00252470 I 0.936
Eucgr.F01091 Eucalyptus grandis Eucgr.F01091 I 0.936
Bra021114 Brassica rapa Bra021114 I 0.935
Bo1g128420 Brassica oleracea Bo1g128420 I 0.935
OB07G24770 Oryza brachyantha OB07G24770 I 0.934
OPUNC07G17890 Oryza punctata OPUNC07G17890 I 0.934
OMERI07G15720 Oryza meridionalis OMERI07G15720 I 0.934
GLYMA12G34990 Glycine max GLYMA12G34990 I 0.933
PRUPE_ppa007577mg Prunus persica PRUPE_ppa007577mg I 0.933
gene30439-v1.0-hybrid Fragaria vesca gene30439-v1.0-hybrid I 0.933
SapurV1A.2174s0010 Salix purpurea SapurV1A.2174s0010 I 0.933
POPTR_0001s41490 Populus trichocarpa POPTR_0001s41490 I 0.933
POPTR_0004s03820 Populus trichocarpa POPTR_0004s03820 I 0.933
OLONG_002265 Oryza longistaminata OLONG_002265 I 0.933
SapurV1A.0127s0010 Salix purpurea SapurV1A.0127s0010 I 0.933
Pm011604 Prunus mume Pm011604 I 0.933
SapurV1A.0746s0010 Salix purpurea SapurV1A.0746s0010 I 0.933
LPERR07G16320 Leersia perrieri LPERR07G16320 I 0.931
mgf016382m Mimulus guttatus mgf016382m I 0.931
mgf025001m Mimulus guttatus mgf025001m I 0.931
Bo01282s010 Brassica oleracea Bo01282s010 I 0.931
SapurV1A.0299s0130 Salix purpurea SapurV1A.0299s0130 I 0.931
mgf007362m Mimulus guttatus mgf007362m I 0.931
Bra027101 Brassica rapa Bra027101 I 0.931
GSMUA_Achr9G19520_001 Musa acuminata GSMUA_Achr9G19520_001 I 0.930
NAC025 Arabidopsis thaliana AT1G61110 D 0.930
Cagra.2213s0001 Capsella grandiflora Cagra.2213s0001 I 0.930
PK08629.1 Cannabis sativa PK08629.1 I 0.930
anac025 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000277 I 0.930
Bra001597 Brassica rapa Bra001597 I 0.930
Pavir.J08552 Panicum virgatum Pavir.J08552 I 0.930
POPTR_0011s12420 Populus trichocarpa POPTR_0011s12420 I 0.930
Bostr.10040s0089 Boechera stricta Bostr.10040s0089 I 0.930
Pavir.Ba00642 Panicum virgatum Pavir.Ba00642 I 0.930
Carubv10021371m.g Capsella rubella Carubv10021371m.g I 0.930
Aquca_059_00027 Aquilegia coerulea Aquca_059_00027 I 0.928
Thhalv10023591m.g Eutrema salsugineum Thhalv10023591m.g I 0.928
GRMZM2G179885 Zea mays GRMZM2G179885 I 0.926
Sb02g036620 Sorghum bicolor Sb02g036620 I 0.926
OBART07G19010 Oryza barthii OBART07G19010 I 0.923
Bostr.0124s0081 Boechera stricta Bostr.0124s0081 I 0.923
NAM Arabidopsis lyrata fgenesh2_kg.1__4366__AT1G52880.1 I 0.923
ONAC010 Oryza indica BGIOSGA024071 I 0.923
NAC018 Arabidopsis thaliana AT1G52880 D 0.923
ONIVA07G17340 Oryza nivara ONIVA07G17340 I 0.923
OGLUM07G18780 Oryza glumaepatula OGLUM07G18780 I 0.923
ORGLA07G0243600 Oryza glaberrima ORGLA07G0243600 I 0.923
ORUFI07G19770 Oryza rufipogon ORUFI07G19770 I 0.923
ONAC010 Oryza sativa OS07G0566500 I 0.922
SapurV1A.0044s0420 Salix purpurea SapurV1A.0044s0420 I 0.922
MDP0000674514 Malus domestica MDP0000674514 I 0.922
POPTR_0011s04650 Populus trichocarpa POPTR_0011s04650 I 0.921
MDP0000120881 Malus domestica MDP0000120881 I 0.920
GSMUA_Achr1G08860_001 Musa acuminata GSMUA_Achr1G08860_001 I 0.919
gene31150-v1.0-hybrid Fragaria vesca gene31150-v1.0-hybrid I 0.918
BRADI1G24390 Brachypodium distachyon BRADI1G24390 I 0.917
PGSC0003DMG400019293 Solanum tuberosum PGSC0003DMG400019293 I 0.916
Solyc07g063420.2 Solanum lycopersicum Solyc07g063420.2 I 0.916
MDP0000173636 Malus domestica MDP0000173636 I 0.915
GLYMA13G31660 Glycine max GLYMA13G31660 I 0.914
anac025 Vitis vinifera VIT_00s0375g00040 I 0.914
Aquca_027_00052 Aquilegia coerulea Aquca_027_00052 I 0.913
Cagra.0946s0024 Capsella grandiflora Cagra.0946s0024 I 0.912
Carubv10009524m.g Capsella rubella Carubv10009524m.g I 0.912
GLYMA07G31220 Glycine max GLYMA07G31220 I 0.911
Traes_2DS_5DF921ABB Triticum aestivum Traes_2DS_5DF921ABB I 0.908
F775_16000 Aegilops tauschii F775_16000 I 0.908
F775_14365 Aegilops tauschii F775_14365 I 0.907
MLOC_8116 Hordeum vulgare MLOC_8116 I 0.907
Traes_2AS_09457EDD8 Triticum aestivum Traes_2AS_09457EDD8 I 0.907
Aquca_024_00081 Aquilegia coerulea Aquca_024_00081 I 0.907
Traes_6DS_90A627C3F Triticum aestivum Traes_6DS_90A627C3F I 0.907
Traes_6AS_6F89CC969 Triticum aestivum Traes_6AS_6F89CC969 I 0.907
GLYMA15G07620 Glycine max GLYMA15G07620 I 0.904
Traes_2BS_58AA829F4 Triticum aestivum Traes_2BS_58AA829F4 I 0.903
TRAES3BF108700110CFD_g Triticum aestivum TRAES3BF108700110CFD_g I 0.903
LjSGA_036741.1 Lotus japonicus LjSGA_036741.1 I 0.901
SELMODRAFT_125697 Selaginella moellendorffii SELMODRAFT_125697 I 0.898
SELMODRAFT_105213 Selaginella moellendorffii SELMODRAFT_105213 I 0.898
PGSC0003DMG400025031 Solanum tuberosum PGSC0003DMG400025031 I 0.897
GLYMA12G22790 Glycine max GLYMA12G22790 I 0.894
Thhalv10012308m.g Eutrema salsugineum Thhalv10012308m.g I 0.892
Ca_12660 Cicer arietinum Ca_12660 I 0.890
GSMUA_Achr4G02380_001 Musa acuminata GSMUA_Achr4G02380_001 I 0.889
GSMUA_Achr10G04570_001 Musa acuminata GSMUA_Achr10G04570_001 I 0.889
LjT04N09.140.nd Lotus japonicus LjT04N09.140.nd I 0.888
GSMUA_Achr6G32320_001 Musa acuminata GSMUA_Achr6G32320_001 I 0.888
SELMODRAFT_147012 Selaginella moellendorffii SELMODRAFT_147012 I 0.887
SELMODRAFT_108667 Selaginella moellendorffii SELMODRAFT_108667 I 0.887
AMTR_s00119p00040230 Amborella trichopoda AMTR_s00119p00040230 I 0.884
GSMUA_Achr6G25380_001 Musa acuminata GSMUA_Achr6G25380_001 I 0.884
Bra018997 Brassica rapa Bra018997 I 0.884
GLYMA06G38440 Glycine max GLYMA06G38440 I 0.884
Bo6g030920 Brassica oleracea Bo6g030920 I 0.884
Lus10011215.g Linum usitatissimum Lus10011215.g I 0.883
Lus10018469.g Linum usitatissimum Lus10018469.g I 0.883
Cla019771 Citrullus lanatus Cla019771 I 0.883
cassava26728.m1 Manihot esculenta cassava26728.m1 I 0.882
GSMUA_Achr7G21770_001 Musa acuminata GSMUA_Achr7G21770_001 I 0.882
TRIUR3_26867 Triticum urartu TRIUR3_26867 I 0.881
MTR_2157s0010 Medicago truncatula MTR_2157s0010 I 0.880
GSMUA_Achr6G32330_001 Musa acuminata GSMUA_Achr6G32330_001 I 0.880
Gorai.010G151400 Gossypium raimondii Gorai.010G151400 I 0.877
GSMUA_Achr3G18010_001 Musa acuminata GSMUA_Achr3G18010_001 I 0.875
LPERR01G00250 Leersia perrieri LPERR01G00250 I 0.874
VIT_08s0040g02110 Vitis vinifera VIT_08s0040g02110 I 0.874
MTR_3g088110 Medicago truncatula MTR_3g088110 I 0.874
PK25206.1 Cannabis sativa PK25206.1 I 0.872
GRMZM2G109627 Zea mays GRMZM2G109627 I 0.872
GLYMA06G11970 Glycine max GLYMA06G11970 I 0.871
e_gw1.259.28.1 Physcomitrella patens e_gw1.259.28.1 I 0.871