CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10030252m.g
(
Citrus clementina
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Ciclev10030252m.g
T297635_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10030252m
NAC/NAM
14
140
PPGFRFHPSDQELIVYYLQNKVTSRPLPASLIAEVDLYKYNPWELPKQALFGEDEWFFFSPRDRKYPNGERPNRAAGSGYWKATGTDKPILSSVGSENLGVKKALVFYTGRPPRGAKTDWMMNEYRL
Links
Other
NAC/NAM
family TFs
Other
Citrus clementina
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g045934m.g
Citrus sinensis
orange1.1g045934m.g
N
0.964
30111.m000742
Ricinus communis
30111.m000742
N
0.938
TCM_041055
Theobroma cacao
TCM_041055
I
0.931
cassava3577.m1
Manihot esculenta
cassava3577.m1
I
0.927
chr3.CM0111.130.nd
Lotus japonicus
chr3.CM0111.130.nd
I
0.920
Lus10007410.g
Linum usitatissimum
Lus10007410.g
I
0.920
evm.TU.supercontig_435.1
Carica papaya
evm.TU.supercontig_435.1
N
0.919
Lus10036117.g
Linum usitatissimum
Lus10036117.g
I
0.917
gene04766-v1.0-hybrid
Fragaria vesca
gene04766-v1.0-hybrid
I
0.912
GLYMA13G40251
Glycine max
GLYMA13G40251
I
0.911
MTR_2g093810
Medicago truncatula
MTR_2g093810
I
0.911
GLYMA12G29360
Glycine max
GLYMA12G29360
I
0.906
MDP0000255884
Malus domestica
MDP0000255884
N
0.906
VIT_06s0004g03080
Vitis vinifera
VIT_06s0004g03080
I
0.904
GLYMA19G36421
Glycine max
GLYMA19G36421
I
0.903
MTR_7g100990
Medicago truncatula
MTR_7g100990
I
0.902
chr1.CM0033.600.nc
Lotus japonicus
chr1.CM0033.600.nc
I
0.901
cassava26728.m1
Manihot esculenta
cassava26728.m1
I
0.898
GLYMA03G33690
Glycine max
GLYMA03G33690
I
0.898
Gorai.009G418700
Gossypium raimondii
Gorai.009G418700
I
0.898
GLYMA12G21272
Glycine max
GLYMA12G21272
I
0.897
GLYMA05G15533
Glycine max
GLYMA05G15533
I
0.896
PRUPE_ppa017586mg
Prunus persica
PRUPE_ppa017586mg
N
0.894
Ca_12031
Cicer arietinum
Ca_12031
I
0.894
VIT_08s0040g02110
Vitis vinifera
VIT_08s0040g02110
I
0.879
Pm001001
Prunus mume
Pm001001
N
0.879
AMTR_s00007p00063550
Amborella trichopoda
AMTR_s00007p00063550
N
0.878
POPTR_0011s05760
Populus trichocarpa
POPTR_0011s05760
N
0.876
Lus10015076.g
Linum usitatissimum
Lus10015076.g
N
0.872
Lus10023179.g
Linum usitatissimum
Lus10023179.g
N
0.872
Ca_02520
Cicer arietinum
Ca_02520
I
0.871
POPTR_0004s04920
Populus trichocarpa
POPTR_0004s04920
I
0.871