gene22522-v1.0-hybrid (Fragaria vesca)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 gene22522-v1.0-hybrid T297976_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC054
M07205_2.00 		Arabidopsis thaliana
CKTVHNNHRCACGYHANCW
WGNTDRCGTGYDNNDBAMG		 Dap-seq
OMalley et al.(2016)
CUC1_colamp_a 		0.911 0.851
NAC054
M07206_2.00 		Arabidopsis thaliana
TWNCKTGHNNNDCAMG
CKTGHNNNDCAMGNWA		 Dap-seq
OMalley et al.(2016)
CUC1_col_v31 		0.911 0.851
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna22522.1-v1.0-hybrid NAC/NAM 10 136

Links

Other NAC/NAM family TFs
Other Fragaria vesca TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra021592 Brassica rapa Bra021592 I 0.913
Bo1g129730 Brassica oleracea Bo1g129730 I 0.913
Thhalv10021186m.g Eutrema salsugineum Thhalv10021186m.g I 0.911
Cagra.0007s0060 Capsella grandiflora Cagra.0007s0060 I 0.911
Bostr.28625s0180 Boechera stricta Bostr.28625s0180 I 0.911
NAC054 Arabidopsis thaliana AT3G15170 D 0.911
CUC1 Arabidopsis lyrata fgenesh2_kg.3__1650__AT3G15170.1 I 0.911
Bo3g066690 Brassica oleracea Bo3g066690 I 0.911
Carubv10014276m.g Capsella rubella Carubv10014276m.g I 0.911
Bra001586 Brassica rapa Bra001586 I 0.911
gene00971-v1.0-hybrid Fragaria vesca gene00971-v1.0-hybrid I 0.896
Aquca_033_00035 Aquilegia coerulea Aquca_033_00035 I 0.895
GLYMA12G26190 Glycine max GLYMA12G26190 I 0.887
GLYMA06G35660 Glycine max GLYMA06G35660 I 0.887
VIT_19s0014g02200 Vitis vinifera VIT_19s0014g02200 I 0.887
MTR_2g078700 Medicago truncatula MTR_2g078700 I 0.885
Ca_22532 Cicer arietinum Ca_22532 I 0.885
LjSGA_071377.1 Lotus japonicus LjSGA_071377.1 I 0.883
Cucsa.122890 Cucumis sativus Cucsa.122890 I 0.879
Cla023717 Citrullus lanatus Cla023717 I 0.877
GLYMA13G34950 Glycine max GLYMA13G34950 I 0.874
GLYMA12G35530 Glycine max GLYMA12G35530 I 0.874