Gorai.013G191800 (Gossypium raimondii)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Gorai.013G191800 T298186_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC047
M07198_2.00
Arabidopsis thaliana
CACGB

VCGTG
Dap-seq
OMalley et al.(2016)
ANAC047_colamp_a
0.903 0.830
NAC047
M07199_2.00
Arabidopsis thaliana
WNNNWYACGYMWYYN

NRRWKRCGTRWNNNW
Dap-seq
OMalley et al.(2016)
ANAC047_col
0.903 0.830
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G191800.1 NAC/NAM 9 142

Links

Other NAC/NAM family TFs
Other Gossypium raimondii TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_02328 Aegilops tauschii F775_02328 I 0.878
RD26 Arabidopsis lyrata fgenesh2_kg.7__1491__AT4G27410.3 I 0.879
anac047 Arabidopsis lyrata fgenesh2_kg.3__367__AT3G04070.1 I 0.916
RD26 Arabidopsis thaliana AT4G27410 I 0.879
NAC047 Arabidopsis thaliana AT3G04070 D 0.903
Bostr.2570s0301 Boechera stricta Bostr.2570s0301 I 0.916
Bostr.7867s0562 Boechera stricta Bostr.7867s0562 I 0.879
BRADI1G17480 Brachypodium distachyon BRADI1G17480 I 0.884
Bo7g111390 Brassica oleracea Bo7g111390 I 0.876
Bo1g048300 Brassica oleracea Bo1g048300 I 0.880
Bo1g152220 Brassica oleracea Bo1g152220 I 0.891
Bo5g148420 Brassica oleracea Bo5g148420 I 0.885
Bra040152 Brassica rapa Bra040152 I 0.891
Bra019052 Brassica rapa Bra019052 I 0.876
Bra026353 Brassica rapa Bra026353 I 0.880
Bra031949 Brassica rapa Bra031949 I 0.881
PK06287.1 Cannabis sativa PK06287.1 N 0.871
Cagra.0570s0027 Capsella grandiflora Cagra.0570s0027 I 0.879
Cagra.2026s0001 Capsella grandiflora Cagra.2026s0001 I 0.916
Carubv10014000m.g Capsella rubella Carubv10014000m.g I 0.916
Carubv10005353m.g Capsella rubella Carubv10005353m.g I 0.879
Cla023770 Citrullus lanatus Cla023770 I 0.875
Ciclev10020717m.g Citrus clementina Ciclev10020717m.g I 0.936
orange1.1g017665m.g Citrus sinensis orange1.1g017665m.g I 0.936
Cucsa.341800 Cucumis sativus Cucsa.341800 I 0.882
Eucgr.K01471 Eucalyptus grandis Eucgr.K01471 N 0.890
Thhalv10025818m.g Eutrema salsugineum Thhalv10025818m.g I 0.876
Thhalv10021011m.g Eutrema salsugineum Thhalv10021011m.g I 0.896
Thhalv10012308m.g Eutrema salsugineum Thhalv10012308m.g I 0.877
Gorai.012G169300 Gossypium raimondii Gorai.012G169300 N 0.918
Gorai.007G267900 Gossypium raimondii Gorai.007G267900 I 0.928
LPERR03G13950 Leersia perrieri LPERR03G13950 I 0.875
Lus10003269.g Linum usitatissimum Lus10003269.g I 0.921
Lus10006547.g Linum usitatissimum Lus10006547.g I 0.920
Lus10042531.g Linum usitatissimum Lus10042531.g I 0.944
chr1.CM0104.240.nc Lotus japonicus chr1.CM0104.240.nc I 0.873
cassava22631.valid.m1 Manihot esculenta cassava22631.valid.m1 I 0.942
cassava35701.valid.m1 Manihot esculenta cassava35701.valid.m1 I 0.935
mgf001766m Mimulus guttatus mgf001766m I 0.895
OBART07G26600 Oryza barthii OBART07G26600 I 0.892
ORGLA07G0209600 Oryza glaberrima ORGLA07G0209600 I 0.892
OGLUM07G26630 Oryza glumaepatula OGLUM07G26630 I 0.892
OGLUM07G26640 Oryza glumaepatula OGLUM07G26640 I 0.892
BGIOSGA026407 Oryza indica BGIOSGA026407 I 0.892
OLONG_012944 Oryza longistaminata OLONG_012944 I 0.890
OMERI07G23240 Oryza meridionalis OMERI07G23240 I 0.892
ONIVA07G26310 Oryza nivara ONIVA07G26310 I 0.878
ORUFI07G27590 Oryza rufipogon ORUFI07G27590 I 0.892
Pavir.J22666 Panicum virgatum Pavir.J22666 I 0.887
Pavir.Bb03737 Panicum virgatum Pavir.Bb03737 I 0.871
POPTR_0013s05080 Populus trichocarpa POPTR_0013s05080 I 0.933
POPTR_0019s04690 Populus trichocarpa POPTR_0019s04690 I 0.922
29950.m001173 Ricinus communis 29950.m001173 I 0.925
SapurV1A.1058s0080 Salix purpurea SapurV1A.1058s0080 I 0.936
SapurV1A.2115s0010 Salix purpurea SapurV1A.2115s0010 I 0.936
SapurV1A.1196s0040 Salix purpurea SapurV1A.1196s0040 I 0.945
SapurV1A.0867s0160 Salix purpurea SapurV1A.0867s0160 I 0.945
Si030267m.g Setaria italica Si030267m.g I 0.871
TCM_026030 Theobroma cacao TCM_026030 I 0.937
Traes_2BS_C116E5668 Triticum aestivum Traes_2BS_C116E5668 I 0.877
Traes_2BS_924D34AA1 Triticum aestivum Traes_2BS_924D34AA1 I 0.877
anac047 Vitis vinifera VIT_08s0007g07670 I 0.930