MDP0000285555 (Malus domestica)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 MDP0000285555 T298512_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC101
M07241_2.00
Arabidopsis thaliana
TGCKTVNDNHNYAMG

CKTRNDNHNBAMGCA
Dap-seq
OMalley et al.(2016)
VND6_colamp_a
0.917 0.368
NAC101
M07242_2.00
Arabidopsis thaliana
TTGCKTVHDNNNYAMGYHWHN

NDWDRCKTRNNNHDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND6_col_v31
0.917 0.368
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000285555 NAC/NAM 8 141

Links

Other NAC/NAM family TFs
Other Malus domestica TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo2g164090 Brassica oleracea Bo2g164090 I 0.911
Bo3g107700 Brassica oleracea Bo3g107700 I 0.911
Bo9g014940 Brassica oleracea Bo9g014940 I 0.915
Bostr.0568s0569 Boechera stricta Bostr.0568s0569 I 0.917
Bra010077 Brassica rapa Bra010077 I 0.910
Bra029266 Brassica rapa Bra029266 I 0.911
Bra035896 Brassica rapa Bra035896 I 0.914
Cagra.4003s0027 Capsella grandiflora Cagra.4003s0027 I 0.917
Carubv10026697m.g Capsella rubella Carubv10026697m.g I 0.917
Cla011742 Citrullus lanatus Cla011742 I 0.875
GLYMA05G32590 Glycine max GLYMA05G32590 I 0.876
GSMUA_Achr11G16860_001 Musa acuminata GSMUA_Achr11G16860_001 I 0.877
MDP0000206868 Malus domestica MDP0000206868 I 0.986
MDP0000772731 Malus domestica MDP0000772731 N 0.915
MDP0000882033 Malus domestica MDP0000882033 N 0.978
MDP0000911336 Malus domestica MDP0000911336 N 0.915
NAC101 Arabidopsis thaliana AT5G62380 D 0.917
Pm001409 Prunus mume Pm001409 N 0.946
Pm003866 Prunus mume Pm003866 N 0.915
Pm011994 Prunus mume Pm011994 N 0.949
Pm012091 Prunus mume Pm012091 N 0.948
Pm013492 Prunus mume Pm013492 N 0.923
Pm028250 Prunus mume Pm028250 N 0.938
Pm031134 Prunus mume Pm031134 N 0.925
PRUPE_ppa015761mg Prunus persica PRUPE_ppa015761mg N 0.965
PRUPE_ppa019675mg Prunus persica PRUPE_ppa019675mg N 0.950
PRUPE_ppa023804mg Prunus persica PRUPE_ppa023804mg N 0.939
PRUPE_ppa025596mg Prunus persica PRUPE_ppa025596mg N 0.939
PRUPE_ppa025721mg Prunus persica PRUPE_ppa025721mg N 0.927
PRUPE_ppa027019mg Prunus persica PRUPE_ppa027019mg N 0.950
Thhalv10004488m.g Eutrema salsugineum Thhalv10004488m.g I 0.911
VND6 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001814 I 0.917