CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000460430
(
Malus domestica
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
MDP0000460430
T298552_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SMB
M07184_2.00
Arabidopsis thaliana
TWNCKTVHDNHNYAMGYWAYH
DRTWRCKTRNDNHDBAMGNWA
Dap-seq
OMalley et al.(2016)
SMB_col_a
0.900
0.658
SMB
M07185_2.00
Arabidopsis thaliana
TWNCKTVNNNNNYAMG
CKTRNNNNNBAMGNWA
Dap-seq
OMalley et al.(2016)
SMB_colamp_a
0.900
0.658
OS06G0131700
M02378_2.00
Oryza sativa
NNNNHMDNND
HNNHKDNNNN
PBM
Weirauch et al.(2014)
pTH8356
0.880
0.614
MDP0000762302
M02383_2.00
Malus domestica
NNNAMKHNWN
NWNDMKTNNN
PBM
Weirauch et al.(2014)
pTH9205
0.873
0.623
BRN2
M07217_2.00
Arabidopsis thaliana
CKTVHDNNNYAMGYWA
TWRCKTRNNNHDBAMG
Dap-seq
OMalley et al.(2016)
ANAC070_colamp_a
0.872
0.570
BRN2
M07218_2.00
Arabidopsis thaliana
TWDCKTVHDNHDYAMGYWAHH
DDTWRCKTRHDNHDBAMGHWA
Dap-seq
OMalley et al.(2016)
ANAC070_col
0.872
0.570
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000460430
NAC/NAM
11
139
PPGFRFHPTDEELLYYYLRKKVSYETIDLDVIREVDLNKLEPWDLKEKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIHLPNSXRIGMRKTLVFYTGRAPHGQKTDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Malus domestica
TFs
160 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_13929
Cicer arietinum
Ca_13929
I
0.928
Pm010886
Prunus mume
Pm010886
I
0.928
29725.m000235
Ricinus communis
29725.m000235
I
0.928
gene19898-v1.0-hybrid
Fragaria vesca
gene19898-v1.0-hybrid
I
0.928
PRUPE_ppa025341mg
Prunus persica
PRUPE_ppa025341mg
I
0.928
PK10271.1
Cannabis sativa
PK10271.1
I
0.926
TCM_033728
Theobroma cacao
TCM_033728
I
0.925
Gorai.004G268500
Gossypium raimondii
Gorai.004G268500
I
0.925
cassava39971.m1
Manihot esculenta
cassava39971.m1
I
0.924
SapurV1A.0093s0460
Salix purpurea
SapurV1A.0093s0460
I
0.924
MTR_2g062730
Medicago truncatula
MTR_2g062730
I
0.924
POPTR_0008s07950
Populus trichocarpa
POPTR_0008s07950
I
0.924
GLYMA08G17140
Glycine max
GLYMA08G17140
I
0.924
cassava32687.m1
Manihot esculenta
cassava32687.m1
I
0.924
SapurV1A.0164s0070
Salix purpurea
SapurV1A.0164s0070
I
0.924
POPTR_0010s18420
Populus trichocarpa
POPTR_0010s18420
I
0.924
LjSGA_059487.1
Lotus japonicus
LjSGA_059487.1
I
0.924
MDP0000652584
Malus domestica
MDP0000652584
I
0.921
MDP0000501518
Malus domestica
MDP0000501518
I
0.921
SMB
Vitis vinifera
VIT_19s0085g01210
I
0.921
Solyc12g017400.1
Solanum lycopersicum
Solyc12g017400.1
I
0.918
PGSC0003DMG400009665
Solanum tuberosum
PGSC0003DMG400009665
I
0.918
Lus10030143.g
Linum usitatissimum
Lus10030143.g
I
0.917
orange1.1g046523m.g
Citrus sinensis
orange1.1g046523m.g
I
0.916
Ciclev10006623m.g
Citrus clementina
Ciclev10006623m.g
I
0.916
Lus10009939.g
Linum usitatissimum
Lus10009939.g
I
0.914
GRMZM2G104074
Zea mays
GRMZM2G104074
I
0.914
GRMZM2G041746
Zea mays
GRMZM2G041746
I
0.914
Sb10g020860
Sorghum bicolor
Sb10g020860
I
0.914
MDP0000168681
Malus domestica
MDP0000168681
N
0.911
GLYMA15G42050
Glycine max
GLYMA15G42050
I
0.911
Si007822m.g
Setaria italica
Si007822m.g
I
0.910
Pavir.Da01009
Panicum virgatum
Pavir.Da01009
I
0.910
Traes_7AL_46F73E667
Triticum aestivum
Traes_7AL_46F73E667
I
0.910
TRIUR3_14210
Triticum urartu
TRIUR3_14210
I
0.910
Traes_7DL_AD6EAD1A6
Triticum aestivum
Traes_7DL_AD6EAD1A6
I
0.910
Traes_7DL_AD6EAD1A61
Triticum aestivum
Traes_7DL_AD6EAD1A61
I
0.910
mg017416m
Mimulus guttatus
mg017416m
I
0.910
BRADI1G38730
Brachypodium distachyon
BRADI1G38730
I
0.910
MLOC_17128
Hordeum vulgare
MLOC_17128
I
0.910
F775_42361
Aegilops tauschii
F775_42361
I
0.910
Pavir.J05053
Panicum virgatum
Pavir.J05053
I
0.910
Pavir.Aa02770
Panicum virgatum
Pavir.Aa02770
I
0.908
Pavir.Ab01037
Panicum virgatum
Pavir.Ab01037
I
0.908
Sb04g009180
Sorghum bicolor
Sb04g009180
I
0.907
Si017641m.g
Setaria italica
Si017641m.g
I
0.907
GSMUA_Achr2G20020_001
Musa acuminata
GSMUA_Achr2G20020_001
I
0.904
ONIVA02G12010
Oryza nivara
ONIVA02G12010
I
0.903
ORGLA02G0097800
Oryza glaberrima
ORGLA02G0097800
I
0.903
OS02G0252200
Oryza sativa
OS02G0252200
I
0.903
ORUFI02G10740
Oryza rufipogon
ORUFI02G10740
I
0.903
OPUNC02G09610
Oryza punctata
OPUNC02G09610
I
0.903
OGLUM02G10770
Oryza glumaepatula
OGLUM02G10770
I
0.903
OB02G19660
Oryza brachyantha
OB02G19660
I
0.903
BRADI3G09520
Brachypodium distachyon
BRADI3G09520
I
0.903
BGIOSGA007898
Oryza indica
BGIOSGA007898
I
0.903
OBART02G10820
Oryza barthii
OBART02G10820
I
0.903
LPERR02G09170
Leersia perrieri
LPERR02G09170
I
0.903
OLONG_007664
Oryza longistaminata
OLONG_007664
I
0.903
mgf025569m
Mimulus guttatus
mgf025569m
I
0.902
Cla005561
Citrullus lanatus
Cla005561
I
0.902
OGLUM06G18230
Oryza glumaepatula
OGLUM06G18230
I
0.901
BGIOSGA021116
Oryza indica
BGIOSGA021116
I
0.901
Cucsa.240210
Cucumis sativus
Cucsa.240210
I
0.901
Bo6g123980
Brassica oleracea
Bo6g123980
I
0.901
Bra008423
Brassica rapa
Bra008423
I
0.901
Bra035127
Brassica rapa
Bra035127
I
0.901
OMERI06G17980
Oryza meridionalis
OMERI06G17980
I
0.901
OS06G0530400
Oryza sativa
OS06G0530400
I
0.901
LPERR06G14120
Leersia perrieri
LPERR06G14120
I
0.901
OPUNC06G15490
Oryza punctata
OPUNC06G15490
I
0.901
OBART06G17120
Oryza barthii
OBART06G17120
I
0.901
ONIVA06G20460
Oryza nivara
ONIVA06G20460
I
0.901
OB06G24850
Oryza brachyantha
OB06G24850
I
0.901
ORUFI06G18140
Oryza rufipogon
ORUFI06G18140
I
0.901
Thhalv10019534m.g
Eutrema salsugineum
Thhalv10019534m.g
I
0.900
SMB
Arabidopsis lyrata
scaffold_202942.1
I
0.900
Carubv10020504m.g
Capsella rubella
Carubv10020504m.g
I
0.900
Bo6g080930
Brassica oleracea
Bo6g080930
I
0.900
SMB
Arabidopsis thaliana
AT1G79580
D
0.900
Aquca_030_00252
Aquilegia coerulea
Aquca_030_00252
I
0.900
Bostr.20129s0396
Boechera stricta
Bostr.20129s0396
I
0.900
GRMZM2G155816
Zea mays
GRMZM2G155816
I
0.900
Cagra.1725s0032
Capsella grandiflora
Cagra.1725s0032
I
0.900
Bo2g095440
Brassica oleracea
Bo2g095440
I
0.895
Bra003602
Brassica rapa
Bra003602
I
0.891
evm.TU.supercontig_118.26
Carica papaya
evm.TU.supercontig_118.26
I
0.891
ORUFI04G15090
Oryza rufipogon
ORUFI04G15090
I
0.890
BGIOSGA015018
Oryza indica
BGIOSGA015018
I
0.888
GRMZM2G099144
Zea mays
GRMZM2G099144
I
0.888
BGIOSGA034998
Oryza indica
BGIOSGA034998
I
0.888
ONIVA04G12040
Oryza nivara
ONIVA04G12040
I
0.888
OBART04G13830
Oryza barthii
OBART04G13830
I
0.888
OLONG_020428
Oryza longistaminata
OLONG_020428
I
0.888
Pavir.Gb01599
Panicum virgatum
Pavir.Gb01599
I
0.886
Ca_15792
Cicer arietinum
Ca_15792
I
0.886
Pavir.J07268
Panicum virgatum
Pavir.J07268
I
0.886
Sb06g017720
Sorghum bicolor
Sb06g017720
I
0.886
MTR_4g035590
Medicago truncatula
MTR_4g035590
I
0.886
Si012319m.g
Setaria italica
Si012319m.g
I
0.886
OB04G21050
Oryza brachyantha
OB04G21050
I
0.886
OGLUM04G13590
Oryza glumaepatula
OGLUM04G13590
I
0.886
AMTR_s00068p00207380
Amborella trichopoda
AMTR_s00068p00207380
I
0.884
F775_23174
Aegilops tauschii
F775_23174
I
0.883
MLOC_19175
Hordeum vulgare
MLOC_19175
I
0.883
BRADI5G11247
Brachypodium distachyon
BRADI5G11247
I
0.883
Traes_2DL_70F83D4B9
Triticum aestivum
Traes_2DL_70F83D4B9
I
0.883
Traes_2AL_F0B17F0EA
Triticum aestivum
Traes_2AL_F0B17F0EA
I
0.883
Traes_2BL_209C14A8F
Triticum aestivum
Traes_2BL_209C14A8F
I
0.883
GLYMA09G36820
Glycine max
GLYMA09G36820
I
0.881
OMERI06G01850
Oryza meridionalis
OMERI06G01850
I
0.880
ONIVA06G02290
Oryza nivara
ONIVA06G02290
I
0.880
OPUNC06G01800
Oryza punctata
OPUNC06G01800
I
0.880
ORGLA06G0019800
Oryza glaberrima
ORGLA06G0019800
I
0.880
OBART06G01950
Oryza barthii
OBART06G01950
I
0.880
ORUFI06G01950
Oryza rufipogon
ORUFI06G01950
I
0.880
LPERR06G01790
Leersia perrieri
LPERR06G01790
I
0.880
OB06G11970
Oryza brachyantha
OB06G11970
I
0.880
BGIOSGA022006
Oryza indica
BGIOSGA022006
I
0.880
OGLUM06G01950
Oryza glumaepatula
OGLUM06G01950
I
0.880
Cla012576
Citrullus lanatus
Cla012576
I
0.880
OS06G0131700
Oryza sativa
OS06G0131700
D
0.880
Cucsa.237820
Cucumis sativus
Cucsa.237820
I
0.880
GRMZM2G435824
Zea mays
GRMZM2G435824
I
0.879
TRIUR3_28259
Triticum urartu
TRIUR3_28259
I
0.879
GSMUA_Achr10G14400_001
Musa acuminata
GSMUA_Achr10G14400_001
I
0.877
VIT_18s0089g01120
Vitis vinifera
VIT_18s0089g01120
I
0.876
TCM_036034
Theobroma cacao
TCM_036034
I
0.876
GSMUA_Achr6G28890_001
Musa acuminata
GSMUA_Achr6G28890_001
I
0.875
MDP0000257674
Malus domestica
MDP0000257674
I
0.875
Aquca_014_00032
Aquilegia coerulea
Aquca_014_00032
I
0.874
PRUPE_ppa026376mg
Prunus persica
PRUPE_ppa026376mg
I
0.873
TCM_015621
Theobroma cacao
TCM_015621
I
0.873
Gorai.004G129200
Gossypium raimondii
Gorai.004G129200
I
0.873
Eucgr.E01053
Eucalyptus grandis
Eucgr.E01053
I
0.873
orange1.1g042376m.g
Citrus sinensis
orange1.1g042376m.g
I
0.873
Pm022820
Prunus mume
Pm022820
I
0.873
POPTR_0011s15640
Populus trichocarpa
POPTR_0011s15640
I
0.873
SapurV1A.0131s0060
Salix purpurea
SapurV1A.0131s0060
I
0.873
Ciclev10021141m.g
Citrus clementina
Ciclev10021141m.g
I
0.873
MDP0000762302
Malus domestica
MDP0000762302
D
0.873
Ciclev10024588m.g
Citrus clementina
Ciclev10024588m.g
I
0.873
orange1.1g014260m.g
Citrus sinensis
orange1.1g014260m.g
I
0.873
30068.m002591
Ricinus communis
30068.m002591
I
0.873
Lus10013782.g
Linum usitatissimum
Lus10013782.g
I
0.873
gene31175-v1.0-hybrid
Fragaria vesca
gene31175-v1.0-hybrid
I
0.873
Gorai.004G267300
Gossypium raimondii
Gorai.004G267300
I
0.873
Lus10039153.g
Linum usitatissimum
Lus10039153.g
I
0.873
cassava45846.m1
Manihot esculenta
cassava45846.m1
I
0.873
MDP0000140229
Malus domestica
MDP0000140229
I
0.873
MDP0000558493
Malus domestica
MDP0000558493
I
0.873
gene01881-v1.0-hybrid
Fragaria vesca
gene01881-v1.0-hybrid
I
0.873
Sb10g020850
Sorghum bicolor
Sb10g020850
I
0.873
cassava42638.valid.m1
Manihot esculenta
cassava42638.valid.m1
I
0.873
BRN2
Arabidopsis thaliana
AT4G10350
D
0.872
29382.m000084
Ricinus communis
29382.m000084
I
0.872
Thhalv10029403m.g
Eutrema salsugineum
Thhalv10029403m.g
I
0.872
ANAC070
Arabidopsis lyrata
Al_scaffold_0006_3164
I
0.872
Bo9g088300
Brassica oleracea
Bo9g088300
I
0.872
Bra037914
Brassica rapa
Bra037914
I
0.872