CBG01235 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG01235 T301417_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.966 0.757
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.966 0.757
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG01235 Nuclear receptor 4 76

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN15241 Caenorhabditis brenneri CBN15241 I 0.988
CRE08751 Caenorhabditis remanei CRE08751 I 0.988
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.966
nhr-183 Caenorhabditis elegans WBGene00018266 I 0.917
CBG01243 Caenorhabditis briggsae CBG01243 I 0.890
CRE18699 Caenorhabditis remanei CRE18699 I 0.863
CRE08753 Caenorhabditis remanei CRE08753 I 0.853
CJA19466 Caenorhabditis japonica CJA19466 I 0.850
CBG01245 Caenorhabditis briggsae CBG01245 N 0.847
CRE08754 Caenorhabditis remanei CRE08754 I 0.843
CBG06387 Caenorhabditis briggsae CBG06387 I 0.836
CBG01246 Caenorhabditis briggsae CBG01246 N 0.810
CRE08750 Caenorhabditis remanei CRE08750 N 0.800
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.799
WBGene00003673 Caenorhabditis elegans WBGene00003673 I 0.796
nhr-190 Caenorhabditis elegans WBGene00018622 I 0.789
CBG01229 Caenorhabditis briggsae CBG01229 N 0.751
CRE08755 Caenorhabditis remanei CRE08755 I 0.751