CJA19466 (Caenorhabditis japonica)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CJA19466 T301995_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.955 0.629
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.955 0.629
CBG01250
M02391_2.00 		Caenorhabditis briggsae
WBYGTGTC
GACACRVW		 PBM
Weirauch et al.(2014)
pTH6110 		0.841 0.600
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.818 0.471
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CJA19466 Nuclear receptor 20 90

Links

Other Nuclear receptor family TFs
Other Caenorhabditis japonica TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG06387 Caenorhabditis briggsae CBG06387 I 0.977
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.972
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.955
CBG19141 Caenorhabditis briggsae CBG19141 I 0.902
CRE18699 Caenorhabditis remanei CRE18699 I 0.902
CRE08755 Caenorhabditis remanei CRE08755 I 0.900
CRE08754 Caenorhabditis remanei CRE08754 I 0.892
CRE18698 Caenorhabditis remanei CRE18698 I 0.892
nhr-179 Caenorhabditis elegans WBGene00017512 I 0.884
CRE05778 Caenorhabditis remanei CRE05778 I 0.882
CRE08753 Caenorhabditis remanei CRE08753 I 0.881
nhr-212 Caenorhabditis elegans WBGene00020153 I 0.878
nhr-133 Caenorhabditis elegans WBGene00003723 I 0.878
CRE08749 Caenorhabditis remanei CRE08749 I 0.875
nhr-183 Caenorhabditis elegans WBGene00018266 I 0.867
CRE14845 Caenorhabditis remanei CRE14845 I 0.859
CRE14847 Caenorhabditis remanei CRE14847 I 0.857
CBN00299 Caenorhabditis brenneri CBN00299 I 0.854
nhr-190 Caenorhabditis elegans WBGene00018622 I 0.854
CRE08751 Caenorhabditis remanei CRE08751 I 0.850
nhr-44 Caenorhabditis elegans WBGene00003634 I 0.850
CBN15241 Caenorhabditis brenneri CBN15241 I 0.850
CBG01235 Caenorhabditis briggsae CBG01235 I 0.850
CJA03572 Caenorhabditis japonica CJA03572 I 0.845
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.844
nhr-110 Caenorhabditis elegans WBGene00003700 I 0.844
CBG01250 Caenorhabditis briggsae CBG01250 D 0.841
CBG27350 Caenorhabditis briggsae CBG27350 I 0.840
WBGene00003673 Caenorhabditis elegans WBGene00003673 I 0.839
CRE05044 Caenorhabditis remanei CRE05044 I 0.834
CRE14848 Caenorhabditis remanei CRE14848 I 0.830
nhr-184 Caenorhabditis elegans WBGene00018415 I 0.829
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.826
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.823
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.823
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.823
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.820
CRE08762 Caenorhabditis remanei CRE08762 I 0.820
CBG09567 Caenorhabditis briggsae CBG09567 I 0.820
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.818
CBN03087 Caenorhabditis brenneri CBN03087 I 0.818
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.818
CRE30948 Caenorhabditis remanei CRE30948 I 0.809
CBG17906 Caenorhabditis briggsae CBG17906 I 0.802
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.802
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.802
CBG15881 Caenorhabditis briggsae CBG15881 I 0.801
nhr-123 Caenorhabditis elegans WBGene00003713 I 0.783
CBG01243 Caenorhabditis briggsae CBG01243 I 0.777
nhr-125 Caenorhabditis elegans WBGene00003715 I 0.777
nhr-98 Caenorhabditis elegans WBGene00003688 I 0.776
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.774
CRE09183 Caenorhabditis remanei CRE09183 N 0.774
CBG01353 Caenorhabditis briggsae CBG01353 I 0.773
CBG19144 Caenorhabditis briggsae CBG19144 I 0.764
nhr-59 Caenorhabditis elegans WBGene00003649 I 0.762
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.762
CBG01251 Caenorhabditis briggsae CBG01251 I 0.762
nhr-117 Caenorhabditis elegans WBGene00003707 I 0.762
CBG06609 Caenorhabditis briggsae CBG06609 I 0.751
CBG06599 Caenorhabditis briggsae CBG06599 I 0.751
CBN18082 Caenorhabditis brenneri CBN18082 I 0.748
CRE08760 Caenorhabditis remanei CRE08760 I 0.747
CJA28065 Caenorhabditis japonica CJA28065 I 0.745