CBN03087 (Caenorhabditis brenneri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBN03087 T301668_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.828 0.543
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.828 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN03087 Nuclear receptor 9 80

Links

Other Nuclear receptor family TFs
Other Caenorhabditis brenneri TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-202 Caenorhabditis elegans WBGene00019742 I 0.893
nhr-201 Caenorhabditis elegans WBGene00019741 I 0.878
CRE08753 Caenorhabditis remanei CRE08753 I 0.856
nhr-99 Caenorhabditis elegans WBGene00003689 I 0.855
WBGene00003673 Caenorhabditis elegans WBGene00003673 I 0.845
CBG06387 Caenorhabditis briggsae CBG06387 I 0.835
CRE08754 Caenorhabditis remanei CRE08754 I 0.835
nhr-123 Caenorhabditis elegans WBGene00003713 I 0.834
nhr-98 Caenorhabditis elegans WBGene00003688 I 0.831
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.828
CJA19466 Caenorhabditis japonica CJA19466 I 0.818
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.811
CRE08755 Caenorhabditis remanei CRE08755 I 0.808
nhr-190 Caenorhabditis elegans WBGene00018622 I 0.794
CBN13200 Caenorhabditis brenneri CBN13200 I 0.793
CBG04928 Caenorhabditis briggsae CBG04928 I 0.791
nhr-133 Caenorhabditis elegans WBGene00003723 I 0.788
CRE15097 Caenorhabditis remanei CRE15097 I 0.786
CRE10693 Caenorhabditis remanei CRE10693 I 0.786
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.782
CRE09225 Caenorhabditis remanei CRE09225 N 0.764
CBN00299 Caenorhabditis brenneri CBN00299 I 0.763
CRE08749 Caenorhabditis remanei CRE08749 I 0.763
nhr-184 Caenorhabditis elegans WBGene00018415 I 0.754
CRE18698 Caenorhabditis remanei CRE18698 I 0.753
CBG01357 Caenorhabditis briggsae CBG01357 N 0.753
CBG01352 Caenorhabditis briggsae CBG01352 I 0.750