CBN00299 (Caenorhabditis brenneri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBN00299 T301649_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.857 0.514
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.857 0.514
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN00299 Nuclear receptor 9 80

Links

Other Nuclear receptor family TFs
Other Caenorhabditis brenneri TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE14845 Caenorhabditis remanei CRE14845 I 0.951
nhr-117 Caenorhabditis elegans WBGene00003707 I 0.938
CBG19144 Caenorhabditis briggsae CBG19144 I 0.923
CBG01353 Caenorhabditis briggsae CBG01353 I 0.914
CBG06387 Caenorhabditis briggsae CBG06387 I 0.880
CRE08749 Caenorhabditis remanei CRE08749 I 0.871
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.857
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.856
CJA19466 Caenorhabditis japonica CJA19466 I 0.854
CRE18428 Caenorhabditis remanei CRE18428 I 0.854
CRE16082 Caenorhabditis remanei CRE16082 I 0.829
CBG06614 Caenorhabditis briggsae CBG06614 I 0.827
nhr-55 Caenorhabditis elegans WBGene00003645 I 0.823
CRE08755 Caenorhabditis remanei CRE08755 I 0.816
nhr-201 Caenorhabditis elegans WBGene00019741 I 0.810
CBG19141 Caenorhabditis briggsae CBG19141 I 0.804
nhr-202 Caenorhabditis elegans WBGene00019742 I 0.789
nhr-44 Caenorhabditis elegans WBGene00003634 I 0.788
CRE09222 Caenorhabditis remanei CRE09222 I 0.787
CRE14848 Caenorhabditis remanei CRE14848 I 0.776
nhr-59 Caenorhabditis elegans WBGene00003649 I 0.776
CRE05779 Caenorhabditis remanei CRE05779 I 0.772
CRE18699 Caenorhabditis remanei CRE18699 I 0.770
CRE14847 Caenorhabditis remanei CRE14847 I 0.767
CBN18082 Caenorhabditis brenneri CBN18082 I 0.766
nhr-123 Caenorhabditis elegans WBGene00003713 I 0.763
CBN03087 Caenorhabditis brenneri CBN03087 I 0.763
nhr-184 Caenorhabditis elegans WBGene00018415 I 0.761
CRE05778 Caenorhabditis remanei CRE05778 I 0.756
CRE08754 Caenorhabditis remanei CRE08754 I 0.748