nhr-59 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00003649 T306173_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.747 0.529
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.747 0.529
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
T27B7.1 Nuclear receptor 18 89

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN18082 Caenorhabditis brenneri CBN18082 I 0.982
CBG01233 Caenorhabditis briggsae CBG01233 N 0.978
CRE08750 Caenorhabditis remanei CRE08750 N 0.973
CBG01234 Caenorhabditis briggsae CBG01234 N 0.972
nhr-275 Caenorhabditis elegans WBGene00021163 N 0.963
CRE08749 Caenorhabditis remanei CRE08749 I 0.871
CRE18699 Caenorhabditis remanei CRE18699 I 0.809
nhr-125 Caenorhabditis elegans WBGene00003715 I 0.799
CBN00299 Caenorhabditis brenneri CBN00299 I 0.776
nhr-202 Caenorhabditis elegans WBGene00019742 I 0.766
CJA19466 Caenorhabditis japonica CJA19466 I 0.762
WBGene00020591 Caenorhabditis elegans WBGene00020591 N 0.759
nhr-55 Caenorhabditis elegans WBGene00003645 I 0.753
CRE09225 Caenorhabditis remanei CRE09225 N 0.749
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.747
CBG01359 Caenorhabditis briggsae CBG01359 N 0.746