NBR_0001218401 (Nippostrongylus brasiliensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 NBR_0001218401 T309728_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.952 0.557
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.903 0.657
nhr-84
M02414_2.00 		Caenorhabditis elegans
NRGTCACAAN
NTTGTGACYN		 PBM
Weirauch et al.(2014)
pTH5828 		0.784 0.571
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
NBR_0001218401-mRNA-1 Nuclear receptor 25 95

Links

Other Nuclear receptor family TFs
Other Nippostrongylus brasiliensis TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.994
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.994
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.994
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.991
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.985
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.976
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.975
CRE08691 Caenorhabditis remanei CRE08691 I 0.956
CRE30948 Caenorhabditis remanei CRE30948 I 0.955
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.955
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.952
CBG09567 Caenorhabditis briggsae CBG09567 I 0.950
nhr-102 Caenorhabditis elegans WBGene00003692 I 0.946
CBG22870 Caenorhabditis briggsae CBG22870 I 0.938
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.935
L892_g2782 Steinernema scapterisci L892_g2782 I 0.934
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.934
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.934
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.930
CBG06611 Caenorhabditis briggsae CBG06611 I 0.925
CBG06601 Caenorhabditis briggsae CBG06601 I 0.925
CBG06609 Caenorhabditis briggsae CBG06609 I 0.925
CBG06599 Caenorhabditis briggsae CBG06599 I 0.925
CRE18430 Caenorhabditis remanei CRE18430 I 0.925
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.923
CBG09320 Caenorhabditis briggsae CBG09320 I 0.907
CBN28290 Caenorhabditis brenneri CBN28290 I 0.907
CRE31070 Caenorhabditis remanei CRE31070 I 0.907
CBN21486 Caenorhabditis brenneri CBN21486 I 0.907
CJA28065 Caenorhabditis japonica CJA28065 I 0.904
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.903
L893_g18997 Steinernema glaseri L893_g18997 I 0.901
CJA09697 Caenorhabditis japonica CJA09697 I 0.901
Minc14668 Meloidogyne incognita Minc14668 I 0.897
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.893
CBN23838 Caenorhabditis brenneri CBN23838 I 0.891
CRE15644 Caenorhabditis remanei CRE15644 I 0.891
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.890
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.889
CBG20729 Caenorhabditis briggsae CBG20729 I 0.889
CBG15881 Caenorhabditis briggsae CBG15881 I 0.878
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.876
L898_g19019 Steinernema monticolum L898_g19019 I 0.875
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.874
L898_g12798 Steinernema monticolum L898_g12798 I 0.866
L889_g6798 Steinernema feltiae L889_g6798 I 0.863
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.860
CRE08749 Caenorhabditis remanei CRE08749 I 0.859
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.858
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.852
CRE15675 Caenorhabditis remanei CRE15675 I 0.851
L889_g6797 Steinernema feltiae L889_g6797 I 0.849
CRE05044 Caenorhabditis remanei CRE05044 I 0.846
L889_g6799 Steinernema feltiae L889_g6799 I 0.846
L898_g3512 Steinernema monticolum L898_g3512 I 0.844
CBG06387 Caenorhabditis briggsae CBG06387 I 0.842
CBN13200 Caenorhabditis brenneri CBN13200 I 0.834
CJA03572 Caenorhabditis japonica CJA03572 I 0.833
NBR_0001834801 Nippostrongylus brasiliensis NBR_0001834801 I 0.833
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.833
HPLM_0000974401 Haemonchus placei HPLM_0000974401 I 0.831
CBG20727 Caenorhabditis briggsae CBG20727 I 0.830
CRE10693 Caenorhabditis remanei CRE10693 I 0.829
CRE15097 Caenorhabditis remanei CRE15097 I 0.829
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.828
CJA19466 Caenorhabditis japonica CJA19466 I 0.826
L892_g14817 Steinernema scapterisci L892_g14817 I 0.826
CBG19141 Caenorhabditis briggsae CBG19141 I 0.823
L889_g6696 Steinernema feltiae L889_g6696 I 0.823
L892_g14834 Steinernema scapterisci L892_g14834 N 0.821
L893_g18993 Steinernema glaseri L893_g18993 I 0.821
CRE14848 Caenorhabditis remanei CRE14848 I 0.812
CBG16982 Caenorhabditis briggsae CBG16982 I 0.807
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.806
L889_g6692 Steinernema feltiae L889_g6692 I 0.805
L898_g4013 Steinernema monticolum L898_g4013 I 0.804
nhr-190 Caenorhabditis elegans WBGene00018622 I 0.800
nhr-44 Caenorhabditis elegans WBGene00003634 I 0.799
L898_g3514 Steinernema monticolum L898_g3514 I 0.798
L892_g2781 Steinernema scapterisci L892_g2781 I 0.798
CBN12210 Caenorhabditis brenneri CBN12210 I 0.795
nhr-45 Caenorhabditis elegans WBGene00003635 I 0.795
CRE00301 Caenorhabditis remanei CRE00301 I 0.795
CBG14515 Caenorhabditis briggsae CBG14515 I 0.795
maker-nMf.1.1.scaf01765-snap-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf01765-snap-gene-0.13 I 0.795
CJA02156 Caenorhabditis japonica CJA02156 I 0.795
SMUV_0000721901 Syphacia muris SMUV_0000721901 I 0.794
SMUV_0000241401 Syphacia muris SMUV_0000241401 I 0.792
L596_g14596 Steinernema carpocapsae L596_g14596 I 0.790
CBN01168 Caenorhabditis brenneri CBN01168 I 0.789
CRE08690 Caenorhabditis remanei CRE08690 I 0.789
nhr-84 Caenorhabditis elegans WBGene00003674 D 0.784
CRE05778 Caenorhabditis remanei CRE05778 I 0.784
L889_g6695 Steinernema feltiae L889_g6695 I 0.783
EVEC_0000956701 Enterobius vermicularis EVEC_0000956701 I 0.781
L898_g19021 Steinernema monticolum L898_g19021 I 0.780
L898_g21763 Steinernema monticolum L898_g21763 I 0.775
SMUV_0000241501 Syphacia muris SMUV_0000241501 N 0.773
nhr-133 Caenorhabditis elegans WBGene00003723 I 0.773
CBN13569 Caenorhabditis brenneri CBN13569 I 0.773
CJA03481 Caenorhabditis japonica CJA03481 I 0.772
CBG04928 Caenorhabditis briggsae CBG04928 I 0.772
CRE08753 Caenorhabditis remanei CRE08753 I 0.770
L889_g6694 Steinernema feltiae L889_g6694 I 0.768
L596_g14590 Steinernema carpocapsae L596_g14590 I 0.765
CRE14847 Caenorhabditis remanei CRE14847 I 0.763
WBGene00003673 Caenorhabditis elegans WBGene00003673 I 0.763
L893_g18992 Steinernema glaseri L893_g18992 I 0.762
CRE08754 Caenorhabditis remanei CRE08754 I 0.762
L898_g3515 Steinernema monticolum L898_g3515 I 0.759
L892_g2780 Steinernema scapterisci L892_g2780 I 0.758
nhr-110 Caenorhabditis elegans WBGene00003700 I 0.756
L596_g14589 Steinernema carpocapsae L596_g14589 I 0.754
CRE08755 Caenorhabditis remanei CRE08755 I 0.746