HPBE_0001646201 (Heligmosomoides bakeri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 HPBE_0001646201 T308875_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.893 0.522
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.890 0.522
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPBE_0001646201-mRNA-1 Nuclear receptor 34 103

Links

Other Nuclear receptor family TFs
Other Heligmosomoides bakeri TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.965
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.965
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.961
HPLM_0000974401 Haemonchus placei HPLM_0000974401 I 0.942
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.937
NBR_0001834801 Nippostrongylus brasiliensis NBR_0001834801 I 0.931
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.927
CBG20727 Caenorhabditis briggsae CBG20727 I 0.913
CBG20729 Caenorhabditis briggsae CBG20729 I 0.911
CJA28065 Caenorhabditis japonica CJA28065 I 0.910
CBG09567 Caenorhabditis briggsae CBG09567 I 0.910
CRE15644 Caenorhabditis remanei CRE15644 I 0.906
CBN23838 Caenorhabditis brenneri CBN23838 I 0.906
CRE31070 Caenorhabditis remanei CRE31070 I 0.898
CBG09320 Caenorhabditis briggsae CBG09320 I 0.898
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.896
CRE15675 Caenorhabditis remanei CRE15675 I 0.893
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.893
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.890
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.889
CBN28290 Caenorhabditis brenneri CBN28290 I 0.888
CBN21486 Caenorhabditis brenneri CBN21486 I 0.888
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.885
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.872
CRE18699 Caenorhabditis remanei CRE18699 I 0.870
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.866
L898_g3512 Steinernema monticolum L898_g3512 I 0.865
CBN13569 Caenorhabditis brenneri CBN13569 I 0.864
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.861
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.860
L889_g6804 Steinernema feltiae L889_g6804 I 0.853
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.850
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.850
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.850
CRE30948 Caenorhabditis remanei CRE30948 I 0.849
L596_g14596 Steinernema carpocapsae L596_g14596 I 0.848
CBG22870 Caenorhabditis briggsae CBG22870 I 0.847
L889_g6692 Steinernema feltiae L889_g6692 I 0.843
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.841
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.839
L889_g6696 Steinernema feltiae L889_g6696 I 0.836
L898_g12799 Steinernema monticolum L898_g12799 I 0.833
L889_g8185 Steinernema feltiae L889_g8185 I 0.832
L892_g10843 Steinernema scapterisci L892_g10843 I 0.831
L893_g18992 Steinernema glaseri L893_g18992 I 0.828
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.823
nhr-30 Caenorhabditis elegans WBGene00016091 N 0.822
L892_g2782 Steinernema scapterisci L892_g2782 I 0.821
L596_g14589 Steinernema carpocapsae L596_g14589 I 0.818
CRE08691 Caenorhabditis remanei CRE08691 I 0.816
L893_g27930 Steinernema glaseri L893_g27930 I 0.815
L596_g14532 Steinernema carpocapsae L596_g14532 I 0.815
L892_g2780 Steinernema scapterisci L892_g2780 I 0.814
L898_g3514 Steinernema monticolum L898_g3514 I 0.813
GPLIN_001629700 Globodera pallida GPLIN_001629700 N 0.808
CJA09697 Caenorhabditis japonica CJA09697 I 0.807
CBG16982 Caenorhabditis briggsae CBG16982 I 0.805
nhr-102 Caenorhabditis elegans WBGene00003692 I 0.800
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.798
L898_g12798 Steinernema monticolum L898_g12798 I 0.793
CBG06611 Caenorhabditis briggsae CBG06611 I 0.791
CRE18430 Caenorhabditis remanei CRE18430 I 0.791
CBG06601 Caenorhabditis briggsae CBG06601 I 0.791
L889_g6792 Steinernema feltiae L889_g6792 I 0.788
L893_g18993 Steinernema glaseri L893_g18993 I 0.787
L889_g6694 Steinernema feltiae L889_g6694 I 0.783
L898_g21763 Steinernema monticolum L898_g21763 I 0.780
L898_g4012 Steinernema monticolum L898_g4012 I 0.778
L898_g4013 Steinernema monticolum L898_g4013 I 0.775
L892_g14814 Steinernema scapterisci L892_g14814 N 0.772
L898_g3515 Steinernema monticolum L898_g3515 I 0.772
CBG19169 Caenorhabditis briggsae CBG19169 I 0.771
nhr-218 Caenorhabditis elegans WBGene00011750 I 0.769
L596_g14590 Steinernema carpocapsae L596_g14590 I 0.767
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.765
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.763
CBG23583 Caenorhabditis briggsae CBG23583 I 0.757
L889_g6695 Steinernema feltiae L889_g6695 I 0.756
L892_g2781 Steinernema scapterisci L892_g2781 I 0.755
L889_g6798 Steinernema feltiae L889_g6798 I 0.752
Minc14668 Meloidogyne incognita Minc14668 I 0.752
L889_g8187 Steinernema feltiae L889_g8187 I 0.751
L893_g18997 Steinernema glaseri L893_g18997 I 0.751
CBG04928 Caenorhabditis briggsae CBG04928 I 0.750
L596_g14536 Steinernema carpocapsae L596_g14536 I 0.746